Lethenteron reissneri (Far Eastern brook lamprey): 133344629
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Entry
133344629 CDS
T09663
Symbol
NPHP3
Name
(RefSeq) nephrocystin-3
KO
K19360
nephrocystin-3
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lrj03037
]
133344629 (NPHP3)
Cilium and associated proteins [BR:
lrj03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
133344629 (NPHP3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
TPR_10
NPHP3_hel
NPHP3
TPR_1
TPR_7
TPR_2
TPR_8
TPR_MalT
TPR_16
AAA_16
TPR_6
NPHP3_N
TPR_14
AAA_22
KAP_NTPase
NACHT
TPR_19
TPR_9
SLFN-g3_helicase
T2SSE
AAA_19
INO80F
Viral_helicase1
PCRF
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
133344629
NCBI-ProteinID:
XP_061410633
LinkDB
All DBs
Position
20:complement(5756274..5813320)
Genome browser
AA seq
1403 aa
AA seq
DB search
MGTGSSLTPGGAELAPPGLASRGCTEIPIEMKPRQKLVPNARLRSVGSARRFKGASFRSV
TSVVDLELAPELERLRKEYEIFRVTKSNEVADMKRKEEKLDSENKRLRAELQALQKSCQK
LRVEKEAALEGRDQAMERAASFQQDRDKVQRQFKIFREAKEKEVQDLLRAKRDLEGRLQR
LQVSTGVGGAGSAAPACEGGDSDGDETRTEVAGSAVMGSHPSMGSMVLLANSMRGPELAH
SLVDLEGTFTSVNRDDWNSALSGLLHGPSSGSHAPHNNTLRCYIMSCPDTQQHADLFVAR
AVPELQSACEARGHFLVAVSFGGTEQKALRESRRREIAGAALLLLFLGRSVPACVAEDCE
EASLRQAEASRPLAIARWVGGGADGRGDAAKGDADSPGALVASLAATNAAQQVIEYSDLE
EGIERLQAHVGRVIKRELRRWRDGSGVDKVSAGAKMIRVAEGPGTPTKAPATDGGGGGGR
PPSSPAPGRPEGSNGDGGSAANGAGGGNGEGDEEEGEEDEEREVEEEGPGDLLWDRHLEQ
EQQEALQMAAQASFPLGLEKYLQRLHDLVATPGPTPPLLVSGGPGSGKSLLLTKWIETLQ
THSPSSLVLYHLVGQPFSSSADPALMVRRFIVKLLQHMWWVPVAGPDGARLLEELPFWLE
RLSARRQGCIILLIDSIDRIQHAERHLPWLIDPLPVNLRVVVSVNVETCPQPWRLWPTLH
LDALSPSHVKTLIQKECSTVGLNLTDHQVKRLDIHFRSATTCNALYTTLVARMVSRARSS
QELEEALHPCLQCHDTPTLFRLALRVTESTLRSARDRERLRELLCLACVARDGVSESELQ
DIDPGLGWALLSPLLHTLQRLCVLSRTCGLIKFRHLQAQEAARQEYVGVQGPGGCQVFRA
RLAQHFSSRLAAGRVTWRVADELPWLLHHDAESRPALQDCLLNLHLCRDLYKRGRFSDLV
SHWQAAGRDRTSLAALYMEALKQREKAPLAGTASSSGGGGDVGSDGSWERSVSELADLHE
TLGRFLRDLGLYSQAVLMLQRSLELRETALDPDHPSVAGTLHRLAAVYLSWRKPGPAQQL
YEQALALVQNAHGHDDPRVARHLDALAALHHKHGRLEQAESLRRQALKIRQKAAAERGNV
SGFELLRRRLLQLEEGPPGGESADAARSLNELGVLYYLQGNPEIAELFFQRSLTMREKVL
GPDHPDCAQSLNNLASLCGERGENERAQCLYERALHNRQRALSRNHPALAYTVKQLALLY
KKGGKLEKALPLYQLTVEIREKASGPNHPSVATALVNLAVVYSQLKRHDEALPLYERALR
TYEDSLGPLHPRVAETLRNLAVLRYEQGDVAGAAELYKRATEIRGGESLPAAAVTGGGHR
PQSLHSSGSEPLGLALHSPLGLG
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgggctcgtcgctgacgccgggcggtgcggagctggccccgccgggcctagcc
agccgcggctgcaccgagatccccatcgagatgaagccgcggcaaaagctggtgcccaac
gcgcggctccgctcggtggggtcggcgcgccgcttcaagggggcctccttccgctcggtg
acctccgtcgtggacctggagctggcgcccgagctggagcgcctgcgcaaggagtacgag
atcttccgcgtgacgaagagcaacgaggtggccgacatgaagcgcaaggaggagaagctc
gactcggagaacaagcggctgcgtgcggagctgcaggcgctgcagaagagctgccagaag
cttcgcgtggagaaggaggcggctctcgagggccgagaccaggccatggaacgagcggcc
tcatttcagcaagaccgggacaaggttcaacgccagttcaagatattccgcgaggccaag
gagaaggaggttcaggatctgctgagggccaagcgggacttggaggggcggctccagcgc
ctgcaggtctccactggggttggcggcgccggctccgccgcaccggcctgcgagggcggt
gactcggatggggacgagactcgcacggaggtggccgggtcggcggtgatggggagccat
ccgtcgatgggcagcatggtgctgctcgccaactccatgagagggccagagctggcacac
agcctcgtcgacctggaaggaactttcaccagcgtcaaccgtgatgactggaactctgca
ctgagtgggcttctgcacgggccctcctccggcagccacgctccacacaacaacactctc
cgctgctacatcatgagctgtccggacacacagcaacacgccgatctcttcgtggcccga
gccgttcccgagctgcagagcgcgtgcgaggcgcggggacacttcttggtggccgtgagc
tttggcggcacggagcagaaggcgctgcgcgagagccgcaggagggagatcgccggcgca
gcgctcctccttctcttcctgggccgctccgtgccggcgtgcgtggcggaggactgcgag
gaggcttcccttcggcaggcggaggcgtcgaggccgctcgccatcgcccgctgggtggga
ggaggggcggacgggaggggggatgcggcgaagggagacgcggactcgcccggggctctg
gttgcgagtctagccgcgacgaacgcagcccagcaggttattgagtacagcgatctggag
gaaggaattgagaggttgcaggctcacgttggaagagtcattaagcgggagctgcggagg
tggagggacggcagcggcgtcgacaaggtttccgccggtgccaagatgatccgggtggcc
gagggccccggaacccccacgaaggcccccgcaacggacggcggcggcgggggggggcgg
ccgccatcctctcccgcaccggggcggccagaggggagcaacggcgacgggggaagcgct
gcgaacggtgcgggtggtggcaacggcgaaggtgacgaggaggagggggaggaagatgag
gagagggaagtcgaagaggagggaccaggcgacttgctgtgggaccgccacctggagcag
gagcagcaggaggccctgcagatggcggcccaagcttccttcccgctcgggctcgagaag
tatctgcagaggctgcacgacctggtggccaccccgggccccactcctcctctgctcgtg
tccgggggccctgggtctgggaagtccctgctgctcaccaagtggatagagacgctccag
acgcactcccccagtagcctggtgctctaccacctcgtcggacagcccttctcctcgagc
gcagaccccgcactcatggttcgacgcttcattgtcaagttgctgcagcacatgtggtgg
gtgcctgtggcgggccccgacggcgcgcggctgctggaggagctgcccttctggctggag
cggctgtcggcgaggaggcagggctgcatcatcctcctcatcgactccatcgaccgcatt
cagcatgcggagaggcacctgccgtggctcatcgaccccctgcctgtcaacctgagggtg
gtggtctccgtcaacgtggagacgtgtcctcagccctggaggctgtggcccacccttcac
ctggacgccttgagcccgagccacgtgaagacccttatccaaaaggagtgctccaccgtg
ggactgaacctcaccgaccaccaggtgaagaggctggacattcattttcgatcggccacc
acctgcaatgccctctacaccacactggtggcgcggatggtgagcagggcacggtcgtcc
caggagctggaggaagctctgcacccatgcctgcagtgtcacgacacccctacgctcttc
cgcctggcgctccgggtcacagagtccaccctgcgctccgccagggatcgcgagcgcctg
cgagagctgctgtgcctggcgtgcgtggcgcgcgacggcgtgagcgagtcggagctgcag
gacatcgacccgggcctgggctgggccctgctgtcgcccctgttgcacacgctgcagcga
ctctgcgtgctgtcccgcacgtgcggcctcatcaagttccgtcacctgcaggctcaggaa
gccgcgcggcaggaatatgtgggggtgcagggccccggaggctgccaggtgttccgagcg
aggctcgcacagcacttctccagccgcctcgcggccggccgcgtgacttggcgtgtggcg
gacgagctgccgtggctgctgcatcacgacgccgagagccgcccggcgctgcaggactgc
ctcctcaacctgcacctgtgccgggacctctacaagcggggccgcttctctgacctggtg
agccactggcaggcggcgggacgagaccgcacctccttggccgccctctacatggaagcg
ctgaagcagcgggagaaggcgcccctggccgggacggcgagcagcagcggcggtggcggc
gacgtgggctcggacgggagctgggagcgcagcgtgtcggagctcgccgacctgcacgag
acgctgggacgcttcctcagggacctgggcctctacagccaggcggtgctgatgctgcag
cgctcgctggagttgcgcgagacggcgctcgacccggaccacccgagcgtggccggcacg
ctgcaccggctggcggccgtctacctctcgtggcgcaagccgggtcccgcccagcagctg
tacgagcaggcgctggcgctcgtgcagaacgcgcacgggcacgacgacccgcgcgtggcg
cgacacctcgacgcgctcgccgcgctgcaccacaagcacggacggctggagcaggccgag
tccctgaggagacaagccttgaagatccgccagaaggctgcagccgagaggggcaacgtg
tcgggcttcgagctgctgcgacgccgcctgctgcagttggaggagggcccccccggcggg
gagtcggcggacgcggcgcgctcgctcaacgagctgggggtgctctactacctgcagggc
aaccccgaaatagcagagttgtttttccagcgctcgctcaccatgcgggagaaggtgctc
ggcccggaccacccggactgcgcgcagtccctcaacaacctggcgtcgctgtgcggggaa
cgcggcgagaacgagagagcccagtgcctctacgagcgagcgctgcacaaccgccagcgc
gccctctcccgcaaccacccggcgctcgcctacaccgtcaagcagctggcactgctctac
aagaaggggggcaaactggagaaggctctacccctctaccagctgacggttgagatcaga
gaaaaggcttctgggccaaaccatcccagcgtggccacagcgctggtcaacttggctgtt
gtctattcccaactgaagcgtcacgatgaggccctgcccctgtacgagcgtgcgctccgc
acgtacgaggacagcctggggcccctgcacccccgcgtggcggagaccctgcggaacctc
gccgtgctgaggtacgaacagggagacgtggctggagcggccgagctgtacaagcgtgcc
acggagatccggggaggggagtcgttgccggcggcggcggtcactggtgggggtcacagg
ccgcagtcgctgcactcgtccggaagcgagccgctcggcctggcgctgcactcgccgctg
gggctaggctag
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integrated database retrieval system
