Lethenteron reissneri (Far Eastern brook lamprey): 133344749
Help
Entry
133344749 CDS
T09663
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase Trim36-like
KO
K12013
tripartite motif-containing protein 36 [EC:
2.3.2.27
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrj04131
]
133344749
04121 Ubiquitin system [BR:
lrj04121
]
133344749
Enzymes [BR:
lrj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133344749
Membrane trafficking [BR:
lrj04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
133344749
Ubiquitin system [BR:
lrj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
133344749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
COS
fn3
ANCHR-like_BBOX
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_3
RING_XB3-XBAT31
zf-C3HC4
zf-C3HC4_2
zf-RING_5
SPRY
Motif
Other DBs
NCBI-GeneID:
133344749
NCBI-ProteinID:
XP_061410892
LinkDB
All DBs
Position
1:complement(4973656..5000030)
Genome browser
AA seq
936 aa
AA seq
DB search
MSGSEAAGELVEEVEEDWFGGDLDSGAHEALLERSEIQVPMKNLERELMCPVCEELFTHP
IILPCQHSVCHRCAKELLCPREWSSSSSTTSPWVPPAPHEASTEPASPSASPVPSPRRRS
LRGGGSPSVERLEKVLRAESLVNLTAAPLRPARPGPRGGCSFPCPACDCDVDLGPKGIAG
LFRNFTLETIVERFRQAARAATAVMCDLCYPPPTEATKSCLDCRKSYCNECFKVHHPWNT
PKATHEYIGPTKNFRPKVLMCPEHEAEKVNMYCEVCRRPVCHLCKLAGIHANHKVTNINS
AYKALKEKLAKSINLLVSKEDQVKEQLGVIETLIKDTETGGDLAARSVTEAFGGLEEAVR
ARRAAMSHRLEGCRDDVACRLHAQHSECEQLLQSSGLVGLAREFLKESDPSCFMQTAKLL
HSRIMRATDRFKSFEADVVDASFSGFTVDVAREQALLGSLDFLKAPETPVLDPSRSAIYK
DAQVSWSLPEGSAPADRFQLEFRPPPRRRPSPVPDRGTPDPASGDDVDDPEWSRVDGIRS
TSHVVTGVQPGVDLTVRVRAVNAAGASAFSAEMTMAAPPAQVFSFLLDDDCGYERERLVL
SPRRASVDSVVGLPALLASEGLAGGSAGSSSAGDNDDPHRCHGDGVNGAAGTAGPLAPLS
FIAGDAAVRGGRHFWVVRVWPSSFLVRVGVAAPEALRCWLRRAVTGGGKGSAGGKDAAAR
GEGRRHKPDSPSSAAPSAAPSAAPSCAFVSVGMGQVVAPSWAQLPAPPPSSPAKGTTRAA
PQAPASASPQHRQQQQQPQQQPAPRATSARSQRAAKPLVRSASAPKSAPGTPRRAAASGR
NARVSALPARLGVCLDHGAGTVAFYDADGGGATRLCEMPVDCSGPVFPVFAFLGGGGLEL
EVADGGGCADGTGGAGGVGKRGAAPPLSARPGVNGV
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggttctgaggctgcaggcgagttggtggaggaggtggaggaggattggttcgga
ggagatttggattcaggggcgcacgaggcgcttctggagcggtcagagatacaggtcccc
atgaagaacctggagcgcgaactgatgtgcccggtgtgcgaggagctcttcacgcacccc
atcatcctgccgtgccagcacagcgtgtgccaccgctgcgccaaggagctcctctgccct
cgcgagtggtcctcctcctcctccaccacctcgccgtgggtcccgccggcgccgcacgag
gcctccaccgagccggcgtcccccagcgcgtcgcccgtgccgagcccgcgccgccgcagc
ctccgcggcgggggctcccccagcgtcgagcggctggagaaggtgctacgtgccgaatcc
cttgtgaacctgacggctgccccgctgcgccccgcccgcccgggcccccgcgggggctgc
tcgttcccgtgcccggcctgcgactgcgacgtcgacctggggcccaaaggcatcgccggc
ctcttccgcaacttcacgctggagaccatcgtggagcgattccgacaggcggccagggcc
gcgacagccgtgatgtgcgacctgtgctaccctccgccgaccgaggccaccaagagctgc
ctggactgccgcaagagctactgcaacgagtgcttcaaggtgcaccacccgtggaacacg
cccaaggccacgcacgagtacatcggccccaccaaaaacttccggcccaaggtgctgatg
tgcccggagcacgaggcagagaaggtgaacatgtactgcgaggtttgccgccgccccgtg
tgccacctgtgcaagctcgccggcattcacgcgaaccacaaggtcaccaacatcaacagc
gcctacaaggcgctcaaggagaaattggccaagagcatcaacctgctggtgagcaaggag
gaccaggtgaaggagcagctgggagtcatcgagactctgatcaaggacacggagacgggc
ggcgatctcgcggcgcgcagcgtcacggaggccttcgggggcctggaggaggcggtgagg
gcgcggcgcgcggccatgtcgcaccgcctggagggctgccgcgacgacgtcgcgtgccgg
ctgcatgcgcagcactccgagtgcgagcagctgctgcagagctcggggctcgtgggcctc
gcccgcgagttcctcaaggagagcgacccctcctgcttcatgcagaccgccaagctgctg
cacagcaggatcatgagggcgacggatcgcttcaagtcgtttgaggcggatgtggtggac
gcgtcattctcggggttcacggtggacgtggctcgggaacaagccttgctgggctccctc
gacttcctcaaggccccggagacgccggtgctggacccgagccgcagcgccatttacaag
gacgcccaggtgagctggtctctccccgagggctccgctcctgccgatcggttccagctc
gagttccggccccctccgcggcgccgcccgtcgcccgtcccggaccgcggcaccccggat
ccggctagcggagatgacgtcgacgacccggagtggagccgcgtggacgggatccggagc
acgagccacgtggtgacgggagtccagcccggcgtggacctcacggtccgagtccgggcc
gtcaacgcagccggagcgagcgcgttcagcgcggagatgacgatggcggcgccgccggcg
caagtcttcagcttcctgctggacgacgactgcggctacgagcgcgagcggctcgtcctc
tccccgcgccgcgccagcgtcgacagcgtcgtcgggctgcccgctctgctcgcgtccgag
gggcttgccgggggcagcgccggcagcagtagcgccggcgacaacgacgacccgcaccgc
tgccacggggacggcgtcaacggcgccgccggcaccgccggcccgctggcgccgctgtcg
ttcatcgccggggacgcggccgtgagaggcgggcgccacttctgggtggtgcgcgtgtgg
cctagcagcttcctggtgcgcgtcggggtggcggcgccggaggctctgcggtgctggttg
cgtcgtgccgtcaccggcggcggcaaaggcagcgccggcggcaaggacgcggccgcgcgg
ggggaaggccgcaggcacaagccggacagcccctcctcggccgccccctcggccgccccc
tcggccgccccctcctgcgccttcgtctccgtgggcatgggtcaggtggtggcccccagc
tgggcccagctgcccgcgccccccccctcctctcccgccaagggcacgacccgggcggca
ccgcaggcgccggcgtcggcgtcgccgcagcaccgccagcagcagcagcagccgcagcag
cagccggcgccacgcgccacctccgcccgctcccagcgagccgcgaagcccctcgttcgt
tccgcctccgcgcccaagtcggcgccggggacgccgcgacgcgctgcggcctccgggcgg
aacgcgcgcgtgtcggcgctgccggcgcgcctcggcgtgtgcctggaccacggcgccggg
acggtggcgttctacgacgccgacggcggcggcgcgacccggctctgcgagatgccggtc
gactgctcgggccccgtgttccccgtgttcgcgtttctgggcggcggcgggctggagctg
gaggtggccgacggcgggggctgcgccgacggtaccggtggagccggcggcgtcggcaag
aggggagccgcgccgccgctgtcggcacggccgggcgtgaacggtgtctga
DBGET
integrated database retrieval system
