Lethenteron reissneri (Far Eastern brook lamprey): 133344752
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Entry
133344752 CDS
T09663
Name
(RefSeq) probable nuclear hormone receptor HR38
KO
K04465
nuclear receptor subfamily 4 group A member 1
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133344752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lrj03000
]
133344752
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lrj03310
]
133344752
Transcription factors [BR:
lrj03000
]
Eukaryotic type
Zinc finger
Cys4 nerve growth factor IB-like
133344752
Nuclear receptors [BR:
lrj03310
]
4. Nerve growth factor IB like
4A. Nerve growth factor IB like receptor
133344752
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
TFIIA
Motif
Other DBs
NCBI-GeneID:
133344752
NCBI-ProteinID:
XP_061410865
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Position
20:11100519..11121628
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AA seq
856 aa
AA seq
DB search
MSAACPELHLMQSALSSSRLMQVPERRAASSSSSSSSSSSSSLSYQACVHAHGQALELQP
LDLSPRLGTPEFVRFNMELANADPGYGGKTSDSCAFHQHHQHQNHHHQQQQQQQQHEYQN
AQQDEDNTDQRQPAPAVVKAEVQPMMSCLLHGASYPHPSHEHHHQQHQEQHQQHQEHQQQ
LNGGSGAREYFKASPPHTPPAAYTDMQQEQQQQHPQLLQRTWDVGAALGALPFPRDYTIT
SLTELGVKALPASRYKSLQPPSSSSPVPYKFYLPGRDAPPSADGSPRFSSYVGCFHRAPA
GEPRAGFPSAEPLPPGFAVPGDPDAHRGLQVASSSSPGPGYSTFSDSLNSQQQQQQRLSR
GSPGGDASRAGARAAHAGYAEGTSDVGVGREMAMSFAGGPLPAVMSGGDNFDLAMTSRAQ
RSDSGMGRGGAHGVVGGMPLAPSPTDYPRGLGPQSQASQQQQQQQHQHQQQQQHQLMSQR
YEDVESPGRFAARRFPTPTSPPPSEGMCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNA
KYVCLASRSCPVDKRRRNRCQFCRFQKCLSVGMIREVVRTDSLKGRRGRLPSKPKGAGAG
RAHGRVGSPGEGQQHGQQHGSGGNALLCGVARAHHDSWPAAAHLDYSMYSPAGEHDPGGP
AAEADHVRVFYELLATSAEASRAWASRLPGFPSLARPDQDILLDAAILELFVLRLAYRSR
PREGRMVFCAGQVLHPSQCLRAFGEWMEPILEFSSSLQSLQIDATAFACLEMTVLLTDRR
ELRESKRVAELRRRVQQSAREHVGAGGHVHAHLAGAPAELRALCTQGLQRLFYLKLEELV
PAPPVVERLFRDTLPF
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctgcatgccctgagctgcacctgatgcaaagtgcgctctcctcctcgcgtctc
atgcaggttccagagcgccgcgcggcctcatcctcatcatcatcatcctcctcttcatca
tcgtccttgtcctatcaagcctgcgtgcacgcgcacggccaggctctcgagctgcagccg
ttggacctgagcccgcgtctcggcaccccagagtttgtgcgctttaacatggaactcgcg
aacgccgacccgggctacgggggaaagacctccgactcatgcgcgttccaccagcaccac
cagcaccagaatcatcaccaccagcagcagcagcagcagcagcagcacgagtaccagaac
gcgcaacaggacgaagataataccgaccagcggcagcccgcgcccgcggtggtgaaggca
gaggtgcagcccatgatgtcctgcctgctgcacggcgcgtcgtacccacacccgagtcac
gagcaccaccaccagcagcaccaggagcagcatcagcagcaccaggagcatcagcagcag
ctcaacggaggctctggggcgcgggaatacttcaaagcgtctccgccgcacaccccgccg
gccgcttacaccgacatgcaacaggagcagcagcagcagcatccgcagctgctgcagaga
acgtgggacgtgggggcagccctgggcgcgctgcccttcccaagagactacaccatcacc
agcctcacggagctcggcgtgaaggcgctgcccgcgtccaggtacaaatccttgcagcct
ccatcctcctcgtcccccgtgccctacaagttctacctgcccgggcgggacgcgccgccg
agcgcggacgggagtccccgcttctccagctacgtcggctgcttccaccgagctccggcg
ggcgaaccccgtgccgggttcccctcggcagagcccctaccgccagggttcgcggtcccg
ggtgacccggacgcgcaccgcggtctgcaggtcgcctcgtcttcctcgcccggtcccggg
tactcgaccttctccgactccctcaactcgcagcagcagcagcagcagcggctcagccgg
gggtccccgggcggggatgcgtcgcgggccggggcgagagcggctcacgcagggtacgcg
gagggcacgagcgacgtgggcgtcggcagggagatggcgatgtcgttcgcgggtggtccc
ctgcccgccgtcatgtccggcggcgacaacttcgacctcgccatgacgagcagagcgcag
cgttcggactcgggcatgggcagaggtggggcccacggggtggtgggtgggatgccgctc
gccccgtctcccaccgactacccgcggggtctggggccacaatcacaagcgtcgcagcag
cagcagcagcagcagcaccaacatcagcagcagcagcagcatcagctgatgtctcagcgc
tacgaagacgtggaatcgccgggccgcttcgccgcgcggcgcttcccgacccccacgtct
cccccgcccagcgaggggatgtgcgccgtgtgcggggacaacgcggcgtgccagcactac
ggggtgcgcacgtgcgaggggtgcaagggcttcttcaagcgcacggtgcagaagaacgcc
aagtacgtgtgcctcgccagccggagctgccccgtcgacaaacggcgccgaaaccgctgc
cagttctgccgcttccagaagtgcctcagcgtgggcatgatccgagaagtggttcgcacc
gacagcctcaagggcaggcgaggccgcctcccctccaagcccaagggcgcgggggcaggg
cgggcacacggcagagtgggcagccccggggaagggcagcaacacgggcagcagcacggc
tcgggagggaacgcgctgctgtgcggcgtggcgcgggctcaccacgactcgtggccggca
gccgcgcacctcgactactccatgtacagccccgcgggcgagcacgaccccgggggcccg
gccgccgaggctgaccacgtgcgcgtcttctacgagctgctcgccacctcggcggaggcg
agccgcgcgtgggcctcgcgtctcccgggcttcccgagcctcgccagacccgaccaggac
atcctcctcgacgccgccatcctcgagctcttcgtcctccgcctcgcctacaggtcgcga
ccccgggagggccgcatggtattctgcgcggggcaggttctgcacccttcccagtgcctg
cgcgccttcggagagtggatggagcccatcctggagttctcctcgtccctgcagtccctg
cagatcgacgccacggccttcgcctgcctcgagatgacggtgctgctcacggaccggcgc
gagctgcgggagtcgaagcgcgtggcggagctgcggcggcgcgtgcagcagagcgcgcgc
gagcacgtgggcgcggggggccacgtgcacgcgcacctcgcgggggctcccgccgagctg
cgcgcgctctgcacgcagggcctgcagaggctcttctatctcaagctcgaggagctcgtg
cccgcgccgcccgtcgtcgagaggctcttccgcgacacgctgcccttttag
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