Lethenteron reissneri (Far Eastern brook lamprey): 133344764
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Entry
133344764 CDS
T09663
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XXVIII) chain-like
KO
K23619
collagen type XXVIII alpha
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lrj01002
]
133344764
Peptidases and inhibitors [BR:
lrj01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
133344764
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Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
Motif
Other DBs
NCBI-GeneID:
133344764
NCBI-ProteinID:
XP_061410885
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Position
20:complement(11843352..11920315)
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AA seq
1172 aa
AA seq
DB search
MSPFRATSAAGGGWHLRGSTVALLVLLLLCCMAELASGQRAGGRRDSTRRAPSSLRHKRP
QANPMPASLYGSDGPDVNLTCAMEIAFLIDSSESAKGSNYNFEQKFVLDFTAMLQREAGL
AGILSWRIALLQYSSTVRVEQMLHDWQGPDDFSARVRQMTYIGHGTYTAYALGNLTELYD
EQARADSVRVAVLVTDGVDHPRGPDPAQAAGALRAQGTRLFVLGLSNVARQPDNTARLQL
MASAPATRYVHDLRHPATLGTLIAELNTLADEECPKQPACQCEKGERGAAGIPGRKGKPG
RDGVHGERGQKGDAGVPGTRGADGAEGRPGFSGEKGDRGQCGAAGEKGDRGPDGPSGPRG
PEGPKGPPGPSGEQGLEGIQGPKGERGLPGPPGVQGEAGIGHPGPKGDFGFPGRAGPAGP
AGIGEPGLPGAPGPQGQPGERGLAGEGFQGAKGDRGNDGPRGPLGPAGFGQKGDKGELGF
PGPAGSTGLSGKGLPGDKGDQGPRGLPGPRGPPGEGIPGPKGIQGLRGDLGPSGIGLEGP
TGPKGELGSPGLSGLPGQRGDDGADGQKGETGLAGPRGPDGPPGIGLQGEKGDHGPRGQK
GFPGSPGPVGVTGPKGQPGLPGVVGLPGPAGHGIVGPKGEPGPAGPQGLIGEIGIGLQGP
KGERGFPGAIGPQGGKGEGYPGPQGLPGLPGFRGEPGLEGVGLPGSKGDTGVRGLPGGRG
PPGEGQPGPKGNVGRQGPPGPHGPSGEGIQGAKGEQGFQGLPGPRGPLGEGIPGPKGDRG
LHGERGRKGDAGDPGEKGSLGAMGRVGQKGDPALTRQEIMKLIKEICGCGVKCRQRPLEL
MFVIDSSESVGPHNFQIIKEFVSALTEKLPIGRNATRVGLVLYSREVQLEFGLGRHASAA
EVRRAVTAMAYLGEGTYTGTALQRAVAEGFAGARHGVPKVALVLTDGETDPREPYPLGQA
VRGAQAAAVEVYAIGIVNRSDPGHATFVAELNLIASDPDEEHVYLIDDFNTLPALEMKLV
SQLCEDENGTPFSPAPKPPVRTQALPVTPHNGRSPEERGKRMQDRNGEPGHFGNTVEAVT
ATSLLVTSVTPESFLLTRRPPTPDHALRCQVQLDQGPCRNFTSRWYYNGDANACGKFWYG
GCKGNDNNFLTSEECQRTCIGSHAEGLGPDGR
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgtccccgttcagggccacgtctgccgcgggcggcggttggcatcttcgcggctccacg
gtggcgctcttggtgctgctgctgctgtgctgcatggcggagctggcgagcggccagcgg
gcgggcggccggcgagattcgacaaggagggccccctcctcgttgcgccacaagaggccc
caggcaaacccgatgcccgcttcgttgtacgggagcgacggcccagacgtgaacttgacc
tgcgccatggagatcgccttcctcatcgacagctcggagagcgccaagggcagcaactac
aatttcgagcagaagttcgtgctggacttcacggcgatgctgcagagggaggccggcctc
gctggcatcctcagctggaggatcgcactcctccagtacagcagcacggtgcgtgtggaa
cagatgctgcatgactggcagggaccggacgatttctccgcccgggtgcggcagatgacg
tacatcggacacggcacgtacacggcgtacgcgctgggaaacctcacggagctgtacgac
gagcaggcgcgggccgactcggtgcgagtcgccgtcctcgtgacggacggcgtcgaccac
ccgcgtggccccgacccggcgcaggcggcgggggcgctacgcgcgcagggcacgcgcctc
ttcgtgctgggcctgagcaacgtggcgcgccagccggacaacacggcccgcctgcaactc
atggccagcgcgccggccacgcgatacgtgcacgacctgcgccacccggccacgctgggc
actctcatcgccgagctgaacacgcttgccgatgaagagtgtcccaagcagccggcgtgc
cagtgcgagaaaggcgagcgtggagctgcggggatcccgggtaggaaaggaaaaccggga
agggatggtgtgcatggtgaaagaggacaaaagggcgacgccggggtgccaggaacccgt
ggagctgatggcgcggagggccggccaggattttcaggggagaagggtgacaggggtcag
tgcggagccgccggcgagaagggagacaggggaccagacgggccgagtggcccaagggga
cccgaaggcccgaaggggcctccaggaccttcaggtgaacaaggcctcgaaggcatccag
ggaccaaagggagagaggggcttgcctggccctccaggtgtgcagggggaggcgggcatt
ggacacccaggacctaagggcgactttggtttcccaggcagagccggacctgcgggcccc
gctgggatcggtgaacctgggctaccgggtgcaccaggacctcagggacagccgggcgag
agaggcctcgcaggggaagggtttcagggcgccaagggagaccgagggaacgatggccca
cggggccccttggggccggcgggtttcggacaaaagggcgacaagggggagctggggttt
cccggacctgcaggatccacggggctgtcaggcaaaggtcttccaggggacaagggagat
caaggccccaggggcttgccgggcccaagaggtcctcctggtgaaggcattcctggaccc
aaggggatccaaggcctgcggggagacctgggaccatccggcatcggcctggagggcccg
acgggcccaaagggagaactgggatctcccggcctcagcgggttgcctgggcagcgtgga
gacgatggcgctgacgggcagaagggagagactggtttggctgggccccgcgggccagac
gggccaccagggattggcctgcaaggggaaaagggagaccatggaccaaggggacaaaag
ggctttccaggcagcccaggcccggtgggagtcacggggcccaagggccagccagggctg
ccgggggtcgtcggcttgccaggacccgcgggccacggcatcgtgggcccaaagggcgag
cccggccctgctggacctcaggggctcataggtgagatcgggattggcctgcagggacca
aagggggagagaggattcccaggtgcgatcggaccccaaggcggcaagggagagggctac
ccaggcccccagggcctgccgggcctgccgggattcaggggcgagccgggactcgaaggc
gtcgggctgcccggttcaaagggggacacaggggttcggggattaccgggaggtcggggc
cccccaggagaggggcagcctggtccaaagggaaacgtcggccggcagggcccacctggg
ccccatggaccgtctggggagggcatccagggagccaagggggagcagggattccagggc
ctccctggaccacgcgggcccctcggggagggtatccccggaccaaagggtgatcgaggg
ctgcacggagagaggggtcgcaagggagatgcgggcgaccccggggagaagggctccctc
ggtgctatgggcagggtcggccagaaaggcgatccggcactgactaggcaagaaatcatg
aagttgataaaagagatatgtggctgtggagtgaagtgccggcagcgtccgctcgagctc
atgtttgtgatcgacagctccgagagcgtgggcccccacaacttccagatcatcaaggag
tttgtgagcgcgctcaccgagaagctgcccattggccgcaacgccacccgggtgggcctg
gtgctgtacagccgggaggtgcagttggagttcgggctgggccggcacgcgagcgccgcg
gaggtgcgccgcgccgtcaccgccatggcctacctgggcgagggcacctacacaggcacg
gcgctgcagcgcgccgtcgccgagggcttcgcgggcgcccggcacggcgtgcccaaggtg
gccctggtgctgacggacggcgagacggacccgcgcgagccctacccgctggggcaggcg
gtgcgcggggcgcaggcggcggccgtcgaggtgtacgccatcggcatcgtgaaccgcagc
gacccgggccacgccaccttcgtcgcggagctcaacctcatcgcgtccgacccggacgag
gagcacgtatacctcatcgacgacttcaacacgctgccagcactggagatgaagctcgtg
agccagctgtgcgaggatgagaacggcacgcctttctcgccggctccaaaacctcccgtg
cgtacgcaagccctccctgtgacgccgcacaatggcaggagcccggaggagcgcgggaaa
cgcatgcaggatcgaaacggggagccgggacactttggcaacaccgtcgaggcggtcacg
gccacctcgttgctcgtgacctccgtgaccccggagtccttcctgctgacccggcgaccc
ccgaccccggaccatgcactcaggtgccaggttcagttggaccagggaccctgccgcaat
ttcacctcccgctggtactacaacggtgacgccaacgcctgcgggaagttctggtacgga
ggctgcaaaggaaacgacaacaacttcttgacgtccgaagagtgccaaaggacgtgcatc
gggtctcatgccgaagggttggggccagatggacggtga
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