Lethenteron reissneri (Far Eastern brook lamprey): 133345050
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Entry
133345050 CDS
T09663
Name
(RefSeq) uncharacterized protein LOC133345050 isoform X1
KO
K12491
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1/3/4/5/6/9/11
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133345050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrj04131
]
133345050
Membrane trafficking [BR:
lrj04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
133345050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
Ras
PH
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Roc
PH_6
Motif
Other DBs
NCBI-GeneID:
133345050
NCBI-ProteinID:
XP_061411433
LinkDB
All DBs
Position
21:2946180..3087199
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AA seq
1748 aa
AA seq
DB search
MSAAQADGDKGRMGDVLRPGSSEGPPRVRPPRTGSEPRRKTVYRICVTMVKHESLEEKGT
DEWPPDADATAVFLRTDALMGGGSRGAAVRDEGRECTACASAATADERGSCERGEGRRWE
GCIEGASDGVCPAFAAEIGAEHGKVQALDSLHGKCEEEACAIPEQVNVRERVSVYEHIAD
GAKVGSAGSKGRVAARPEKQMHVREVDKTLVSAERSSLVVLATGEWPGERWSSEVASPNL
KGHDQKAPVSFAVNHGLNKHTECLTGHSVDTLSFSNKGQISSADRSCSPISALANEHGSG
SSGSRSCSKVGLRCSRAQIRDCNVRKRPASACALSTFESQGTRARDATMSAGLQKVECQR
KVKSACGHICVGRGLTVDGSQYHNLVSSEKDANKCLCALKVGPSRAKSEARFGHNVADLA
ELCSAQKNAVNDGNKLAYSKLTKADNEIGTAETMAVMPIGQSATQGQCIVGNTDKQPVTT
ASATAASFDDMPQPSCTASARNVSSNEENKSVLNSDMQQSPKSNWGINHSILKREDALDR
PGKPGDKASLPGRSGVDGSFTAIGSQTPCAPITEDKPTSAAAERVIEEALQGARTDFKLL
EDDSTGPDMPGTSQKRPTSLLLPGAMGSGRREVLSDLDSPLCREGQPLQVPCSLSNDLQK
LTLPKRESDHSVNHKNKFLMPSKSTPGRPQKSFSFRLLGGRDAMVQRRAESQDRAERHLG
KTCQVPNLTKGRSVERKVVPTVRLHEKRKTVDVGEVLSKTDGLLLLLQGNHQPHMQPERA
SQTPRSVSSEEDNEMPSAGPGAASTNPLSPMEKAGADDPHKLRRFFSGILGQRDSGSHLW
FGLGNYRVDEKGGKATAEEVADLDRGSEPEIRIHLDSISNPEGNGTSDSFVNSQEWTLSR
SVPELKVGILGNLASGKSALVHRYLTGTYVQEESPEALEAGGRFKKEIIVDGQSYLLLIR
DEGGPPEPQFASWVDAVIFVFSLEDEISFQTVYNYYSRLANVRNASELPLLLVGTQDAIS
ASNPRVIDDARARKLSNDLKRCTYYETCATYGLNVERIFQDVAQKIVAMRKKQQLSIGQC
KSLPNSPSHTNMSTGTIPSVHINQIPASNGGGGGGGSVVGGGGAFSDYSSSVPSTPSTSQ
KELRLDPLPVSSGTPTPVRKQSKRRSNLFTSRKGSDTEKEKKSVEAKSDNIGSGRAIPIK
QGMLLKRSGKSLNKEWKKKYVTLCDNGILTYHPSLHDYMQNVHGKEIDLLRTTVKVPGKR
PPRASAGLGPSASPKANGLAKELSSTQLAATAPGAPAGGGVHAERSISGINLVSYNMRPE
GLHQRSFSVSSAEQWNEAPAGAVSANANGVSDAPCSSPSISSTTSPKLEPPASPHSNRKK
HRRKKSTANPRADGPANSAEDNDEPFEFLIVSLTGQSWHFEASCAEERESWVQAVESQIF
ASLQSCHSSKNKTRTGSHSDAVTIQSIRNIRGNAFCVDCDAPGPDWASLNLGALMCIECS
GIHRNLGTHLSRVRSLDLDDWPLELAAVMLAIGNATANGVWEADTQGLGKPQPDSPREEK
ERWIRAKYESRAFLGAAPPCEVPLGQQLLRAVVEDDLRAAVLLLAHGSRDDVNETYGDGD
GRSALHLACAMANVVLAQLLIWYGVEVSARDAHGYTALVAARRAGSQECAELLLQYGCPD
DAGAGNASAPTPNPTRRNPNINNSNSSGGSNNNNNGATVGAAAAAAVGMSSSSSFTGRSD
MKTSASMI
NT seq
5247 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcggcacaagcagacggtgacaagggacggatgggcgacgtgctgcgcccgggc
agctcggagggccccccccgcgtgcggcccccccgcacaggatcggagcctcggaggaaa
accgtgtaccgtatctgcgtcacaatggtgaaacacgaatccctggaggagaagggaacg
gacgagtggcctccggatgccgacgccaccgccgtctttctacggaccgatgctctcatg
ggcggcggctcgagaggggcagctgtgcgcgacgaagggcgcgagtgcacggcatgtgcc
tccgctgccaccgctgacgagaggggaagctgcgaacgaggagagggccgtcgatgggaa
ggatgtatcgagggtgccagcgatggagtctgtccagcgtttgcagcggagattggtgct
gaacacgggaaagtgcaggcactcgattcactgcatggaaagtgcgaagaggaggcgtgc
gcgatccccgagcaggtgaacgtcagagagagagttagcgtttacgagcacattgccgac
ggtgccaaggtgggatcggcaggttcaaagggacgtgtcgcggcacgtccagaaaaacaa
atgcacgtgcgggaagtggacaaaacccttgtatctgcagagaggagctcgcttgttgta
ttagccacgggagagtggcctggagagcgttggagtagtgaagtggcgtcgcccaactta
aagggccacgatcaaaaggctcccgtaagtttcgctgtcaatcatggtctaaataagcat
acggaatgtctgacgggacactctgtagacacgttgagcttctcaaacaagggtcagatt
tccagcgctgatcgcagctgctcacctatatcagcattggctaatgaacatggatccggc
tcatctggcagcagaagctgctcaaaagttgggctcaggtgcagcagggcccagatacga
gattgtaacgtgagaaagcgacctgccagtgcgtgtgcattgagcacattcgaaagccag
ggtaccagggctagggatgccacgatgtcagcagggctgcagaaagttgaatgccagagg
aaagtcaagagcgcctgtggacatatttgtgtcggcagaggattgacggtggacgggtcg
caatatcataacctggtttcgagtgagaaagatgcaaataaatgtctgtgtgcccttaag
gttggtccctccagagcgaaatctgaagcgcgctttggtcacaatgtggcggatttggca
gaattgtgctcggcacaaaaaaatgcagttaatgatggcaacaaattggcttattccaaa
ttgactaaagcggacaatgaaataggaacagccgaaacgatggctgtcatgccaattggc
cagagcgccacacaggggcaatgcattgttggtaacactgataagcaacctgtgacaact
gcttctgcaacagcagcctcattcgatgatatgccacagccatcatgtacagcgagtgct
cggaatgtttcgagtaatgaagagaataagtccgtgcttaacagtgatatgcaacagagc
ccaaaatcgaattggggtataaatcactccattttgaaaagagaagatgctttggatagg
ccaggcaagccaggggacaaggcttcacttcccggtagaagtggagtggatgggtccttc
actgccataggatcccagactccgtgcgcacccatcactgaagacaaaccaacatcagca
gctgctgaaagggtcattgaagaagcgttgcagggagcacgcacagattttaaattactt
gaagatgactcaactggcccagacatgcctggcacaagtcagaaaaggcccacgagtctg
ctcttgccaggcgccatgggctcaggcaggagggaggtgctgagtgatctggattctccc
ctgtgccgtgaagggcagccactgcaagtgccgtgctccctgagcaacgacctgcagaag
ctcactctgcccaagagggaatcggaccattcagtgaaccacaaaaacaagtttctcatg
ccttcgaagtcaactcctggacgaccacaaaaaagcttcagctttcggctgctcggaggg
agggatgcgatggtgcaacggagagcggaaagccaagacagggcagagcggcacttagga
aaaacgtgtcaggtgcccaacttgacaaaaggaaggtccgtggagaggaaggtagtgccg
accgtgcgccttcacgagaagcggaaaacggtggatgtcggggaggtgctctccaagaca
gacgggctgcttctgctgctgcagggtaaccatcagccgcacatgcagccggagcgcgcg
agccagactcctcgatccgtctccagcgaggaggacaacgagatgccttcagccggaccg
ggagccgcaagcaccaacccgctctcgccgatggagaaggccggtgcagatgacccgcac
aagctgcgcaggttcttcagcggtattttgggacagagagactcggggtcgcacctctgg
ttcggtcttgggaactaccgcgtggacgagaaaggagggaaggccacggctgaggaagtg
gcggacctcgatagaggctctgagccggaaattcgtattcacttggatagcatcagcaac
cccgagggcaacggcacgagcgactcatttgtaaacagccaggagtggaccctcagcaga
tctgtaccagagctcaaagtggggatcctgggaaacctggcgagtggcaaatcggcgctg
gtgcaccgctacctaacgggcacatacgtgcaggaggagtcaccggaagcgctggaagca
ggcgggcgtttcaagaaggaaatcattgtggacggacagagctacctgctcctcatccgg
gatgaaggtggtcccccagagccccagttcgcatcttgggtcgacgccgtgattttcgtg
ttcagcctggaggacgagatcagcttccagacggtctacaactactacagccgcctcgcc
aacgtgcgcaacgcctccgagctgccgctgctgctcgtggggacgcaggacgcgatcagc
gccagcaacccgcgcgtcatcgacgacgcccgcgcccgcaagctctccaacgacctcaag
cgctgcacctactacgagacgtgcgccacctacggcctcaatgtggagcgcatcttccag
gacgttgcacagaagatcgtggcgatgagaaagaaacagcagctctccattgggcagtgc
aagtccctgcccaactctccgagccacaccaacatgagcacgggcaccatcccctccgtg
cacatcaaccagattccggccagcaatggtggcggtggcggtggcggtagcgtggtgggt
gggggaggggcattcagcgactactcgagttccgtgccgtccaccccgagcacgagccag
aaggagctgcgactcgacccactgcccgtgtcctccggcacccccacgcccgtgcgcaag
cagtccaagcgccgctccaacctcttcacgtcacgcaagggcagcgacacggagaaggag
aagaagagtgtggaggcaaagtcggacaacattggcagcggcagagccatcccaattaaa
cagggcatgctgctgaagcgcagcgggaagtcgctgaacaaggagtggaagaagaagtac
gtgaccctgtgtgacaacggcatcctcacgtaccacccgagcctgcacgactacatgcag
aacgtccacggtaaggagatcgatctgctgcgcaccaccgtgaaggtgccgggcaagcgg
ccaccacgtgcctctgctggtctcggacccagtgccagccccaaggccaacggcctcgcc
aaggagctgagcagcacgcagctcgcggccacggcgcccggcgcaccagcggggggcggc
gtccacgccgagcgctccatcagtggcatcaacctggtgtcgtacaacatgcgccccgag
ggcctgcaccagcgctccttctccgtgtcgagtgctgagcagtggaacgaggcccccgcc
ggtgccgtctctgccaacgctaatggggtgagcgatgcgccctgctccagccccagcata
tcgagcaccaccagccccaagctggagccgcccgcgtccccgcacagcaaccgcaagaag
caccggaggaaaaaaagcacggcgaacccgcgcgccgacggcccggccaacagcgccgaa
gataacgacgagccgtttgagttcctcatcgtgtcactcacgggccaaagttggcacttc
gaggcctcatgtgctgaggagcgcgagtcctgggtgcaagccgtggagagccagatcttt
gccagcctgcagtcctgccacagctccaagaacaagacacggacgggcagccacagcgac
gccgtcaccatccagtccatcaggaacatccgagggaatgccttctgtgtcgactgcgat
gctcccggcccagactgggcgagcctgaacctgggcgccctcatgtgcatcgagtgctca
gggatccaccgcaacctgggcacgcacctgtcgcgcgtgcgctcgctcgacctggacgac
tggccgctggagctcgccgccgtcatgctggccatcggcaacgccacggccaatggcgtg
tgggaggccgacacgcagggcctcggcaagccgcagccagactcgcccagggaggagaag
gagcgctggatccgtgccaagtacgagagccgcgcgttcctgggggcggcgccgccctgc
gaggtgccgctgggccagcagctgctgcgcgccgtcgtggaggacgacctgcgagccgcc
gtgctgctgctggcgcacggctcgcgcgacgacgtcaacgagacgtacggcgacggagac
ggccgctccgcgctgcacctcgcctgcgccatggccaacgtcgtgctggcccagctgctc
atctggtatggcgtggaggtgagtgcgcgggacgcgcacggctacacggcgctcgtggcg
gctcggcgcgccggtagccaggagtgcgccgagctgctcctgcagtacggctgccccgac
gatgccggtgccggcaacgcctcggcgcccacccctaaccccacgcggcgcaaccccaac
atcaacaacagcaactccagcggcggcagcaacaacaataacaatggcgccaccgtcggc
gccgccgccgccgccgccgtgggcatgagcagcagcagcagcttcaccggcaggagtgac
atgaagacctcggcgagcatgatttga
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