Lethenteron reissneri (Far Eastern brook lamprey): 133345066
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Entry
133345066 CDS
T09663
Symbol
CLASP1
Name
(RefSeq) CLIP-associating protein 1 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lrj03036
]
133345066 (CLASP1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lrj04812
]
133345066 (CLASP1)
Chromosome and associated proteins [BR:
lrj03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
133345066 (CLASP1)
Cytoskeleton proteins [BR:
lrj04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
133345066 (CLASP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT_EF3_N
CEP104-like_TOG
TOR1L1_N
HEAT
HEAT_2
HEAT_DAAF5
Cnd1
Adaptin_N
Dopey_N
TAN
ParcG
MMS19_N
Motif
Other DBs
NCBI-GeneID:
133345066
NCBI-ProteinID:
XP_061411459
LinkDB
All DBs
Position
21:complement(3566172..3644613)
Genome browser
AA seq
1634 aa
AA seq
DB search
MEQNMEYFLMQVMQKDVSKRLQTGQELVDYLSDPVRSWDVEQDPSLLDRMVDGLTGWVGS
SNFKVSLLGLEVLGALVDRLQDRFKMHLGTILPSLIDRFGDAKDQVREATQGLLLKVMDV
AAPPQFVWERLLGAFKHKNFRTREGVCLCLSATINKFGAQCLTLSKIVPHICMLLGDANG
SVRDAATLSLVQIYRHVGEKVRLDLSRKGLPQQRLAALFDKFDEVQKSGNMIATATAEKG
FEEDDCLDGNKPSSAQAQTSFRVPTAKRVPTNTAGASASAAPSRRPTLPTAVVRPTSAAT
AGAGAVDEEDFTRCIEDVTPAQIFSTRDLEESLAKVREVLADDKHDWEHRVTALKKLRSL
VIAGATEYDCFFQHLRLLDAALKLSAKDLRSQVVREACITLSHLALVLKNKFDHTAESTL
PTLLNLVANSAKIMATSGVVAIRIIIRNTHAPRLIPLLTNNCTSKSVAVRRRCFEFLDLM
LHEWQQNTLEKHIGLLVDTIKKGIHDADSDARMEARKAYWGLRGNFPAEAETLFAALEPS
YQKALQSQLRGSSSVGSLPRSDHSTSSSQESLNRPASAKRLMSSPSANAAGRVSVSSKSL
TGVPATGSLTRSRSDIDVNAAASAKSRATPPSSSGAPPGLASRSAAQPRFGAAAALPPGS
YASLANGTPDNPGDVAYADYAYGRVRSRRPSAGSTHSTHSTTASSPADSRGRTRTKISQS
QRSKSANPGGAGSRSGSPGKMLSVAPGSSLSGVVQRVPLPAATSSPAKHSRIPRSQGCSR
ETSPSRLSLARSGSSRIPRPSVSQGCSRDNSRDTSPVRGFPSLASRHHSRSTSALSSSEP
LVPADRFSLSHSGRLLGNDIEAAVADALLLGDPRSKNKPRRRYEPYGSMYSDDDANSDAS
SACSERSYGSRNGSTSLYLRQMEDVAELLNRCASANWTERKEGLIGLQALFKSQRTLSRV
ELKRLCEIFTRMFADPPSKVFSMFLETLVDFLVLYRDELHDWLYLLLTQLLKKMGADLLG
SVQTKVQRCLDVTRDSFQFDQQFNILMRFIVDQTQTPNLKVKVAVLKYIESLALQMDPAD
FVNSSETRLAVSRIITWTSEPKSSDVRKTAPGLYADETLYRSCSLEGSTDGPCKKAAQAV
LIALFELNTPEFTMLLGALPKTFQEGATKLLHNHLRNTSNAGTSSPSSTVTRGTPRASLG
RVSPLTSPTMTSQGALSPSRAWGLGADLSPRSLALPTFRPQPLSPLSAYAPKGIWRKYSP
SLLDYDTENLNAEDIYSSLRGVSEAIQNLSFRSQEDLTEPPRKESDTASRDSGIAASLTD
VRGPSSADSVDGPAGRTVLDNKTSSLLNTLAPRPAGSSSRPVRDYNPLHYADTLIAIGSV
HEDEAGQLRHGDMSEQCAMVSDILRELAADVDGSRGEERRTALLELLKLAREDALGTRDE
SFKAILVTLLDTLKDADYTVRTLALRVLREIVRNRPDPFKNYAELTIIRSLEAHKDPHKE
VVRAAEETAMALATSIQPEQCLQVLCPIVQTATYPTNLAAIKMLTRVVERISHGDLLPLV
PAVIPGLLQGYDNTESSVRKASVFCLVAVHSVIGDDLKPHLAQLTGSKMKLLNLYIKRAQ
TGSAGSSGDTLGQC
NT seq
4905 nt
NT seq
+upstream
nt +downstream
nt
atggagcagaacatggagtatttcttgatgcaggtcatgcagaaggatgtcagcaagcga
ctgcagactgggcaggagttggtggactacctctcagatcctgtgcgatcgtgggatgtg
gagcaggacccatcgctcctggaccgtatggtggacggactgaccggctgggttggatca
agcaactttaaggtgtccctgcttggcctagaggtgctgggggccctggtggatcgcttg
caggatcgattcaagatgcatctgggcacaatcctgccgtccttaatcgaccggtttgga
gatgcaaaggatcaggtcagggaggcaactcaaggtctcctccttaaggtcatggacgtt
gcagcaccaccacagtttgtttgggagcggttgttgggagcgtttaagcataaaaacttt
cgcacacgagaaggagtctgcctgtgcctcagcgccaccatcaacaagtttggtgcccag
tgtctgaccctcagcaagattgtacctcacatctgcatgttactgggagatgctaatggc
tcggtgcgcgacgcggccacgctgagtctggtacagatctaccggcacgttggtgagaag
gtgcgtttggacctcagtcgcaagggccttcctcagcagcggttagctgcattgtttgac
aaattcgatgaggtgcagaagtctggcaacatgattgctacagccacggcagagaaggga
tttgaagaggacgactgcctcgatggcaacaagccgagctcggcccaggcgcagacctcg
ttccgtgtgcccacggcgaagagggtcccaacaaacacggccggcgccagtgccagcgcg
gccccgtcccggcgacccacgctgcccaccgctgtggtccggcccacctctgctgccaca
gccggagctggcgctgtggacgaggaagattttactcgatgcatagaggatgtcactccc
gcacagattttctcgacccgagacctagaggaaagcctcgccaaggttcgggaggtcttg
gcagatgacaagcatgattgggagcatcgtgtcaccgctctcaagaagctgcgatcactg
gtgattgccggtgccacggaatacgactgcttctttcagcacctccgtctgctggacgcc
gccttgaagctgtcggccaaggatttgcggtcccaggttgtgcgggaggcctgcatcacg
cttagccacctggccttggtgctgaagaacaagtttgaccatactgcggaaagcaccctt
cctacactcttaaacctggtggccaacagtgccaagatcatggccacttccggagttgtc
gccatccgcatcatcatccggaatacacatgcgccgcgtctaattccactccttacaaat
aactgcacatcgaaatctgttgcagtacgaagacgctgcttcgagttcttggatttgatg
ttacacgagtggcagcagaacaccttggagaaacatatcggcttgttagtggatacgatc
aagaagggaatccacgatgccgactcagatgctcgtatggaggcaagaaaagcatactgg
ggcttgcgaggcaatttcccggccgaggcagagaccctgtttgcagctctggagccaagt
taccagaaagcccttcagagccagcttcgaggctcctccagcgtgggctctctgccacgc
tcagaccactccacctcctcctcccaggagagcctcaataggccagcatctgccaaacgc
ctaatgagcagcccctcagcaaacgcagcaggcagagtgtctgtctcctccaagtccttg
acgggggtcccggctactggctcactgactcgctcccgcagcgacatcgatgtcaacgcg
gccgccagcgcaaagtcacgcgccactcccccctcctcctcgggcgcgccgcccggcctg
gcgtcccgcagcgccgcacagcccagatttggtgcggcagccgccctaccaccgggatcc
tacgcatcactcgcaaacggcacaccagacaatcctggggacgtagcctacgctgactat
gcgtacggacgcgtgcgctcgcgccgccccagcgcaggcagcacccacagcacccacagc
accacggcctcgtcgcccgccgactcccgcggccgcacgcgcaccaagatctcccaatcg
cagcgatccaaatccgccaatcctggtggtgcgggcagtaggtcgggttccccaggcaag
atgctgagtgtggcgccgggctccagtttatcgggcgtggtgcagcgcgtccctctaccg
gccgccacgtcttcgccggccaagcacagccgcatcccacgcagccagggctgcagccgc
gaaacgagccccagccgtctgtcgctggcaaggagtggcagcagcagaattccccggcct
agcgtcagtcagggctgcagccgggacaacagcagggacacgagtccggtgcggggcttc
ccttcccttgcctctcgccaccactcccgctctaccagcgcactctcctcctccgagccg
ctcgtgcccgcagaccggttttcgttgagccactctgggcggctgctgggaaatgacatc
gaagcagccgtagcggacgcactgctgcttggagatcctaggagcaagaacaagccgcga
cggaggtacgagccatacggctccatgtactcggacgacgacgccaacagcgacgcatcg
agcgcgtgctcagagcgctcgtacggctcgcgcaacggctccacgtcgctctacctgcgc
cagatggaggacgtggcggagctgctcaaccgctgcgccagcgccaactggaccgagcgc
aaggagggcctcatcggtctgcaggctctcttcaagtcacagcgcacgctcagtcgcgtg
gagctgaagagactctgcgagattttcacgaggatgttcgctgaccctcccagcaaggtg
ttcagcatgttcctggagacactggtggacttcctggtgttgtaccgcgacgagctgcat
gactggctctacctgctgctgacccagctcctcaagaagatgggtgccgatctattgggc
tccgtacagaccaaagtgcaacgctgcctcgacgtgacaagggactcattccagtttgat
cagcagttcaacatcctgatgaggttcatcgtggaccagacgcagacaccaaacctcaag
gtgaaggtcgccgtgctgaagtacatcgaaagtctggccctgcagatggacccggccgac
tttgtcaactccagcgagacccgtctggccgtctcacgcatcatcacctggaccagcgag
cccaaaagctctgacgtcaggaagaccgcccctggtttgtatgccgatgaaaccttgtac
agatcttgttctttggaaggatccacagatgggccctgtaaaaaggcggcacaggccgtg
ctgattgcgctgtttgagctcaacactcccgagttcaccatgctgctgggggcgctgccc
aagaccttccaagagggagccaccaagcttctccacaaccacctgcgcaacaccagcaat
gccggcacaagctctcctagcagcacggtgacccgtgggacaccacgtgcctcgctgggt
cgggtcagcccactcacctcccctaccatgacctctcagggggccctctcccccagtcgt
gcgtggggcttgggtgctgacctatcccctcggtccctagccctccctactttccgcccc
cagcctctgtccccactctctgcctatgctcccaaaggcatctggcgtaaatattcaccc
agcctgctggactacgacacggaaaacctgaatgcagaggacatctacagctccctgcgc
ggcgtatcggaggccatacagaacctgagcttccgtagccaggaggacctaaccgagcca
ccccgcaaggagagtgacacagcatcgcgcgacagcggcatcgcggcctcgctgacggac
gtgcgtgggcccagctcggcggactctgtcgacggtccggccggccgcacggtgctcgac
aataagacgtcgtcgctgctcaacacgctggccccacgcccggcgggctccagctcgcgg
cccgtgcgcgactacaacccgctgcactacgccgacacgctcatcgccatcggctcggtg
cacgaggacgaggctgggcagcttcgtcacggtgacatgtcggaacagtgtgccatggtt
tcggacatcctacgggagctagcggcggatgtggacggcagccgcggggaggagcgccgc
acggcactgctggagctgctgaagttggcacgggaagacgcgctgggcacccgcgacgag
agcttcaaggccatacttgtcacgttgctggacacgctcaaggacgcggactacacggtg
cggacgctggctctccgtgtgttgcgggaaatcgtgcgcaatcggcccgacccgttcaag
aactatgccgagctgaccatcatcagaagcctggaggcgcacaaagaccctcacaaggag
gtggtgcgtgcggcagaggagacggccatggccttggcaacatcgatccagcctgagcag
tgcctgcaggtcctgtgtcccatcgtgcagacggccacctaccccacgaacctggcggcc
ataaagatgctcacgcgggtggtggagcgcatttcgcacggggacctgcttccgctggtg
cccgcagtcatcccgggcctgctgcagggatacgacaacacggagagcagcgtgcgcaag
gcgagcgtgttctgcctggtggccgtgcactctgtcattggggatgacctcaagccgcac
cttgcgcagctcacaggcagcaagatgaaactgctgaacttgtacatcaagcgtgcgcag
acaggcagtgccggcagcagcggggacaccctcggccagtgctga
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integrated database retrieval system
