Lethenteron reissneri (Far Eastern brook lamprey): 133345112
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Entry
133345112 CDS
T09663
Symbol
XRCC5
Name
(RefSeq) LOW QUALITY PROTEIN: X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
133345112 (XRCC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrj03400
]
133345112 (XRCC5)
DNA repair and recombination proteins [BR:
lrj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
133345112 (XRCC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
Nuf2
Motif
Other DBs
NCBI-GeneID:
133345112
NCBI-ProteinID:
XP_061411579
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Position
21:5528075..5542277
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AA seq
731 aa
AA seq
DB search
MARSAMAVCMDVGLSMGSQVPGQRTSMDFAKEVFTKFTQRQVFADSKDEVALVLFGTEET
QNDLAEDGGYQNINAIRSLRVADFELLEYIQTLESCSCQGDYVDAIVVCMDLLQKKVVGK
RFERISICVLSDFGGPCSSDQVDIIRKNLKKADISLQFFLPFPLSEEGDMDRGDDGRNEG
QGPRYRGPGGKGLTAVQHKGVKVLKDLLLGPEGEPELDEVYTFSDGLERLSFFKRMERQP
YPWPCTMTLGANLTIRITGYKAVTLETPKKAWTTVEAQSKRKEDIKQETVYCLFDEHEKE
IGEDDLIQGYRYGSDIVPFSKEDESQMKYKLDGKCFDVLGFTKSCHIKRHHYMGTQTIKI
TGNGDDEHSVVAFSALLHALEELDMVAIVRYAYNVASIPQVGFGFPNIKSTHEYMVFLQL
PYCEDLRHYTFPPLLNNKMFTPSEEQLSAVDSLIDRMSLVREDDXEAVVEELFKTTKIPN
PVFQRLFQCLQHKAFFPEEPLPPMEQNLLAMLEPPPEITAASVPVIELLQKLFPLQAAPK
KEQLTGKDIFKDRNREEPEEKKPRFSDDRDENGSACLVASVAEGRVSKVGTVDPRKDFQV
LCARKEEFSFKEVSEQLEQCLEKFLDLRERTYYMKTLDCLKAYREEANKAKEPHQYNTFL
KRLKQLVADLGLQDFWQLLVQDRLTLISCEENSASSVTGQEAEQFFVVEQEQEELMVAEP
AGDVDDLLEMM
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggtctgccatggcggtgtgcatggacgtggggctgagcatgggaagccaagtc
ccgggccagaggacatccatggatttcgccaaggaggtcttcaccaagttcacccagagg
caggtttttgcagacagcaaggatgaggtggcccttgtgctttttggcactgaggagaca
caaaatgacctggctgaagacggtggctaccagaacatcaacgcaattcgttctctcaga
gtggcagattttgagctcctcgaatatatccaaactttggagtcatgcagttgccagggt
gactatgtggatgctattgtggtatgcatggacctccttcagaaaaaagttgtgggaaag
cggtttgaaaggataagcatttgtgtgctcagcgactttggtggcccctgcagttcagac
caggttgacatcatcagaaaaaacctgaaaaaggccgatatctctctccagttttttctt
ccattcccattaagtgaagagggggacatggatcgtggtgatgatggccgtaatgaaggg
caaggccctcgctatagaggtccagggggtaaaggcctcacagcggtgcaacacaaagga
gtgaaggttctgaaggatctgctgctggggccagagggggagccggagctggatgaagtc
tacactttcagtgatggactagaacgtctgagcttctttaagaggatggagcggcagcca
tacccctggccatgcacaatgaccttgggcgccaacctgaccatccgcattacaggctac
aaggctgtgacattggagacgccaaagaaggcttggacgaccgttgaggcgcagtcaaag
agaaaggaagatataaagcaggagacagtctactgcttgtttgatgaacacgagaaagaa
attggcgaagacgacctcatccaaggatatcgttacggaagtgacatagtcccattctcg
aaagaggatgagagccagatgaagtacaagttggatgggaaatgttttgatgtgctgggc
tttaccaagtcctgccatataaaacgtcatcactacatgggtacccaaaccatcaaaatc
actggcaacggagatgatgaacactcggtggtggcattctccgcactgctgcatgccttg
gaggagctagacatggtggccatcgtccgttatgcctacaatgtcgcttcaatcccgcaa
gtcggctttggattccccaacatcaaaagcacccatgaatacatggtttttttgcagctg
ccatattgtgaggacctcaggcattacacgtttccccctctcctaaacaacaagatgttc
actccgtcggaggagcaactgagtgcggtggactcgctcatcgatcggatgagcctggtg
cgggaggatgatnnggaggcagtagtagaggagctctttaagacgaccaagattccgaac
ccagtgttccagcgccttttccagtgcctgcagcacaaggccttcttccctgaggagcct
cttcctccaatggaacaaaacctcttggccatgctggagccacctcctgagatcacagct
gccagcgtgccagtcatcgagcttctccaaaagctgttcccgctccaagctgctcccaag
aaggagcagttaactggaaaggacatcttcaaggacaggaatcgcgaagagcctgaagaa
aagaagcctcgcttttcagatgacagggacgagaatggaagcgcgtgccttgtggcgagt
gtagcagaaggcagggtcagcaaggttggcacagtcgatcctcgcaaggactttcaggtg
ttgtgtgcaagaaaagaagagttttccttcaaggaagtgtctgagcaactggaacagtgc
ctggaaaagttcctggatttgcgggagaggacctactacatgaagacattggactgccta
aaagcataccgagaagaagctaacaaggccaaagagcctcaccagtacaacacattcctg
aagagactcaagcagctggtggcagatctgggcctgcaggacttttggcagctgctggtg
caagatcggctgaccctgatcagctgtgaggaaaactcagcgagcagcgtgactggccag
gaagctgagcagttctttgtggtggaacaggagcaggaagagctgatggttgctgagccg
gcaggagatgtcgatgatctgctggagatgatgtga
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