Lethenteron reissneri (Far Eastern brook lamprey): 133345114
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Entry
133345114 CDS
T09663
Symbol
ERCC3
Name
(RefSeq) LOW QUALITY PROTEIN: general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03022
Basal transcription factors
lrj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
133345114 (ERCC3)
09124 Replication and repair
03420 Nucleotide excision repair
133345114 (ERCC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrj03021
]
133345114 (ERCC3)
03400 DNA repair and recombination proteins [BR:
lrj03400
]
133345114 (ERCC3)
Enzymes [BR:
lrj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
133345114 (ERCC3)
Transcription machinery [BR:
lrj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
133345114 (ERCC3)
DNA repair and recombination proteins [BR:
lrj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
133345114 (ERCC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
AAA_34
Motif
Other DBs
NCBI-GeneID:
133345114
NCBI-ProteinID:
XP_061411581
LinkDB
All DBs
Position
21:complement(5594864..5606966)
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AA seq
796 aa
AA seq
DB search
MGKRDRERGDKDRKRWRKRKDEDEEEEAAANEDEDQQEAVPTAAGRQVETANTIIDEFGA
KDYRSQMTLKQDHSSRPLWVAPDGHIFLEAFSPVYKYAHDFLIAIAEPVCRPARIHEYRL
TAYSLYAAVSVGLQTSDIIEYLQKLNKTSIPDGILTFIRLCTVSYGKVKLVLKHNRYFVE
SAFPDVIQQLLQDDVVKQCRLRSEEGETPLINETFSGKSALQLNKPSTTSSGGADGASTS
QGQTSEQTEAQTVVPSDIFHFYEQMDKEDEDEAVETHTVSFEIKQDTIELLQKRCIEMEF
PLLAEYDFRNDAVNPDLDIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLV
GVTAACTVRKRCLVLCTSAVSVEQWKAQFRMWSTADESQICRFTSDAKDKPSGCGIAIST
YSMLGHTTKRSWEAERVMDWMKSQEWGLMLLDEVHTIPARMFRRVLTIVQAHCKLGLTAT
LVREDDKIVDLNFLIGPKLYEANWMELQNAGYIAKVQCAEVWCPMTPEFYREYVSTRTKK
RLLLYVMNPNKFRACQFLIRFHERRNDKVIVFADNVFALKEYAVRLNKPYIYGPTSQGER
MQILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKG
MVAEEYNAYFYSLVSQDTQEMAYSAKRQRFLVDQGYSFKVITKLAGMEEGELMFSTKDEQ
QQLLQKVLAASDLDAEEEIVAGEFGGPRSQMSRRVGSMSSMSGADNAMYLEYQVPRSKSS
MGGKVLHPLFKRFRNK
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggggaagcgagaccgggagcgcggagacaaagacaggaagcgctggaggaagcgcaaa
gatgaggacgaggaggaggaggcggcggctaatgaggatgaagatcagcaagaggcagtc
ccgactgctgctggtcggcaggtggagacggcaaacacaataatcgacgaatttggagcc
aaagattaccgctcacagatgaccctcaaacaagaccactcgtcacgccccctctgggtg
gcacccgacggccacatcttcctggaagccttctcgcccgtgtacaagtatgcacatgac
tttttgattgcaatcgcggagcctgtgtgccggccggcacgtatacatgagtaccggcta
acggcgtactccctgtatgccgctgtgagtgtcggcctccaaacctctgacatcatagaa
tacctccagaaactgaacaagaccagcattcctgatggaatactcaccttcattaggctc
tgcacagtcagctacggaaaagtcaaacttgtactgaagcataacaggtattttgtggag
agtgcctttccggacgtgattcagcaactgctgcaggatgatgtggtgaagcagtgtcga
ctgcgctctgaggagggggagacacccctcatcaacgaaacattttctggcaaatcagcc
ctacaactgaataaaccaagcaccactagctcgggaggagctgatggagcctccacatcc
caggggcagacttcagaacagacagaagcacagacagttgtcccatcagacatattccac
ttctatgagcagatggacaaggaggatgaggatgaggctgtggagacccataccgtctcc
tttgagatcaaacaggacacaattgaacttctccagaaacgctgcattgaaatggagttt
ccattgttggccgagtacgacttccgaaatgatgcagtcaacccagaccttgatattgac
cttaagcccactgctgtgctgcggccttaccaggagaagagcctccggaagatgttcggc
aatggccgagcccgttcgggagtcattgtgctgccatgtggtgctgggaaatcgttagtg
ggtgtgacagcagcatgcacggtcagaaagcgctgtcttgtactctgcacatctgcggtg
tcagtggaacagtggaaggctcaattccggatgtggtcaacggcagatgagagccaaatc
tgccggtttacttctgatgccaaggacaagccatcgggttgtggaatcgccattagcaca
tattcgatgctgggccacacgacaaagcgatcttgggaggcagagcgtgtcatggattgg
atgaagagccaggagtggggactaatgcttctggatgaggtccacaccattccagctcgc
atgttccgccgggtgctgaccattgtgcaggcgcactgcaagctgggccttacggccaca
ctggtgcgcgaggacgacaagatcgttgacctcaacttcctcattggccccaaactgtac
gaagccaactggatggagctgcagaatgctggttacattgctaaggtgcagtgtgccgag
gtgtggtgtcccatgaccccggaattttaccgggagtacgtgtcaacccggaccaagaag
cggctgctgctctatgtaatgaacccaaacaagttccgcgcctgccagtttctgatccgc
ttccacgagcgccgcaacgacaaggtcatcgtgtttgcagacaacgtgtttgcactcaag
gagtatgcagtacggctcaacaagccatatatttatgggccaacttcacaaggcgagcgt
atgcagatcctacagaatttcaagcacaatcccaaaataaacaccatctttatttcaaag
gttggcgacacatcctttgacctgcccgaggctaatgtgcttatccagatctcgtcccat
ggaggatcacggcgccaagaggcacaacggcttggccgagtcttgcgtgctaaaaaaggc
atggtggcagaggagtacaacgcttatttctactcactcgtatctcaggatacccaggag
atggcctattcggccaaacgacagcgcttccttgtggaccagggttacagcttcaaagtg
attacaaagcttgcaggcatggaggaaggagaactcatgttctctaccaaggatgaacag
caacagctgcttcagaaagtgctcgctgcctccgatctggacgctgaggaggagatcgtg
gccggtgaatttggcgggcctcgatcacagatgtcacggcgtgtgggcagcatgagttcc
atgtctggagctgacaatgctatgtacttggagtaccaggtcccacgttccaagtcgtct
atgggtggcaaagtgctgcaccctctcttcaagcgcttccgaaataagtga
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