Lethenteron reissneri (Far Eastern brook lamprey): 133345139
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Entry
133345139 CDS
T09663
Name
(RefSeq) integrin beta-1-like
KO
K05719
integrin beta 1
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04145
Phagosome
lrj04510
Focal adhesion
lrj04512
ECM-receptor interaction
lrj04514
Cell adhesion molecules
lrj04530
Tight junction
lrj04810
Regulation of actin cytoskeleton
lrj04820
Cytoskeleton in muscle cells
lrj05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
133345139
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133345139
04514 Cell adhesion molecules
133345139
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133345139
09144 Cellular community - eukaryotes
04510 Focal adhesion
133345139
04530 Tight junction
133345139
09142 Cell motility
04820 Cytoskeleton in muscle cells
133345139
04810 Regulation of actin cytoskeleton
133345139
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
133345139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrj04131
]
133345139
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lrj04147
]
133345139
04515 Cell adhesion molecules [BR:
lrj04515
]
133345139
04090 CD molecules [BR:
lrj04090
]
133345139
Membrane trafficking [BR:
lrj04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
133345139
Exosome [BR:
lrj04147
]
Exosomal proteins
Proteins found in most exosomes
133345139
Cell adhesion molecules [BR:
lrj04515
]
Integrins
Integrin beta subunits
133345139
CD molecules [BR:
lrj04090
]
Proteins
133345139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
DUF2975
Motif
Other DBs
NCBI-GeneID:
133345139
NCBI-ProteinID:
XP_061411620
LinkDB
All DBs
Position
21:6401415..6448759
Genome browser
AA seq
796 aa
AA seq
DB search
MAWSRCVCAALLVTLTLTLSLGQPELRNECLLANAKSCGECIQTGSRCSWCTKSNFTEVG
EPNSARCDYVENLRERGCGAERTENPRGSQALLLDRPLSERGQKLSPDHITQVAPQRLTL
RLRSGEPQVFNVTFRRAEDYPIDLYYLMDLSYSMKDDLENVKKLGTELQRRMKDVTSDFR
IGFGSFVDKTVMPFISTTPAKLRNPCGTREEVCTSPFSYRNVLPLTSNGSLFNELVSLQK
ISGNLDSPEGGLDAMMQVAACEDNIRWRNVTRLLVFSTDAGFHFAGDGKLGGIVIPNDGH
CHLDREGGYTKSDVYDYPSVAQLVQKLGDKNIQPIFAVNNEFHDVYRSLSELIPKSAVGV
LSSNSSNVIQLIIDAYNALSSEVILENTKVPEGVHVAYTAHCKYGETRTGDGGRACSNIQ
IGDEVTFSISVTATRCPNEGEDARLTIRPLGFNEKVEVTLQFVCECACHSLGTADSPECS
QGNGRLECGACRCNEGRIGRLCECSKDEVNSEDIQATCKRDNSSSVVCSGRGDCVCGECV
CHKRDNANEHVFGNLCECDDFSCDRAAGKICGGNGICDCGHCVCFPNFTGNACDCALGTH
GCEGRGGQICNGRGVCECGKCRCSEPRYQGATCELCPTCPEACEEHKDCVQCAAFANGPR
KETCEECGLKVRVVPELTQPGAVQQIVHCKQKDDDDCWFFFTFTGSGSNASVEVQEKREC
PAEPNVLAIIAGVVAGIVLIGLALLLIWKLLTSIHDRREFAKFEKEKLTAKWDTGENPIY
KSAVTTVVNPKYGGIQ
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggagtcggtgtgtctgcgcggcgctgctggtgaccttgactctgacgctgtct
ctgggtcagccagaattgcgaaatgagtgtcttttggccaacgcgaagtcatgcggtgaa
tgcatccagacagggagccgctgcagctggtgcacaaaatctaacttcaccgaggtcggg
gagcccaactcggcacgctgcgactacgtggagaacctgcgcgagcggggctgtggcgcg
gagcgcacggagaatccccggggcagccaggcgctgctgctcgaccgcccgctcagcgag
cgtgggcaaaagctatcgcccgaccacatcacacaggtcgccccgcagagactcacgctg
cgcctgcggtcgggtgagccgcaggtgttcaacgtgacgttccgccgtgcagaggactac
cccatcgatctctactacctgatggacctgtcctactccatgaaggacgacctagagaac
gtgaagaagctcggcacggagctgcagcgcaggatgaaggacgtgaccagcgacttccgc
atcgggttcggttcctttgtggacaagacggtgatgccattcatcagcacaacgcccgcc
aagctgcgcaacccgtgcggcacccgcgaggaggtgtgcaccagccccttcagctaccgc
aacgtgctgccgctcacgagcaatggcagcctgttcaacgagctcgtgagcctccagaag
atctcggggaacctcgactctcccgagggtggtctggacgccatgatgcaggtcgctgcg
tgcgaggacaacatccgttggcgcaatgtgacgcgcctgctcgtgttctccacggatgcc
gggttccactttgcgggcgacgggaaactgggtggcattgtcatacccaatgacgggcac
tgccacctggacagggagggcggctacacgaagagcgatgtctatgattacccgtccgtt
gcgcagctggtgcagaagctgggggacaaaaacatccaaccgatctttgctgtcaacaat
gagttccacgacgtctacaggagcctgagtgagttgatccccaagtcagcagtaggcgtg
ctttcttccaactcgtccaatgtgatccagctcatcatcgacgcctacaatgcgctgtcg
tcggaggtgatcctggagaacacgaaggtgccggagggagtgcacgtggcctacacggcg
cactgcaagtacggcgagacgcgcacgggcgacggtggccgcgcctgctccaacatccag
atcggcgacgaggtgacgttcagcatcagcgtgacggcgacgcggtgcccgaacgagggc
gaggacgcgcgcctcaccatccgcccgctcggctttaacgagaaggtggaggtgacgctg
caattcgtgtgcgagtgcgcgtgccactcgctcggaacagccgacagccctgagtgcagc
cagggcaacgggcgacttgagtgcggcgcttgccggtgcaacgagggtcgcatcggacgg
ctgtgcgagtgcagcaaagacgaggtgaactcggaggacattcaggcgacatgcaagcgc
gacaactcgtcgtcggtggtgtgcagcgggcgcggtgactgcgtgtgcggcgagtgtgtg
tgccacaagcgcgacaacgccaacgagcacgtcttcggcaacctgtgcgagtgcgacgac
ttctcttgcgaccgggccgccgggaagatctgcggcggtaatggtatctgtgactgcggc
cactgcgtgtgcttccccaacttcacggggaacgcgtgcgactgcgcgctcggcacacac
ggctgcgagggccgcggaggtcagatctgcaatgggcgcggtgtgtgcgagtgcggcaag
tgccggtgctcagagccacgctaccagggcgcaacctgtgagctgtgccccacctgcccg
gaggcgtgcgaggagcacaaagactgcgtgcagtgcgccgcattcgctaacgggcctcgc
aaggaaacgtgtgaagagtgtggcctgaaggtgcgcgttgtgcccgagctgacgcagccg
ggtgccgtgcagcagatcgtgcactgcaagcagaaggacgatgacgactgttggttcttc
ttcacgttcactggctctggcagcaacgcatccgtcgaggtgcaggagaagagagagtgc
cccgcggagcccaacgtgctggcgatcatcgcgggcgttgtggccggcatcgttctcatt
ggcctcgcactgctgctcatctggaagctgctgacatccatccatgaccggcgcgagttc
gccaagttcgagaaggagaagctcactgccaagtgggacacgggagagaacccaatctac
aagagtgcggtcaccacagtggtcaaccccaagtacggcggaatccagtga
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integrated database retrieval system
