Lethenteron reissneri (Far Eastern brook lamprey): 133345139
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Entry
133345139 CDS
T09663
Name
(RefSeq) integrin beta-1-like
KO
K05719
integrin beta 1
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04145
Phagocytosis
lrj04510
Focal adhesion
lrj04512
ECM-receptor interaction
lrj04514
Cell adhesion molecule (CAM) interaction
lrj04517
IgSF CAM signaling
lrj04518
Integrin signaling
lrj04530
Tight junction
lrj04810
Regulation of actin cytoskeleton
lrj04820
Cytoskeleton in muscle cells
lrj05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
133345139
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133345139
04514 Cell adhesion molecule (CAM) interaction
133345139
04517 IgSF CAM signaling
133345139
04518 Integrin signaling
133345139
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
133345139
09144 Cellular community - eukaryotes
04510 Focal adhesion
133345139
04530 Tight junction
133345139
09142 Cell motility
04820 Cytoskeleton in muscle cells
133345139
04810 Regulation of actin cytoskeleton
133345139
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
133345139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrj04131
]
133345139
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lrj04147
]
133345139
04515 Cell adhesion molecules [BR:
lrj04515
]
133345139
04090 CD molecules [BR:
lrj04090
]
133345139
Membrane trafficking [BR:
lrj04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
133345139
Exosome [BR:
lrj04147
]
Exosomal proteins
Proteins found in most exosomes
133345139
Cell adhesion molecules [BR:
lrj04515
]
Integrins
Integrin beta subunits
133345139
CD molecules [BR:
lrj04090
]
Proteins
133345139
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
DUF2975
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
133345139
NCBI-ProteinID:
XP_061411620
LinkDB
All DBs
Position
21:6401415..6448759
Genome browser
AA seq
796 aa
AA seq
DB search
MAWSRCVCAALLVTLTLTLSLGQPELRNECLLANAKSCGECIQTGSRCSWCTKSNFTEVG
EPNSARCDYVENLRERGCGAERTENPRGSQALLLDRPLSERGQKLSPDHITQVAPQRLTL
RLRSGEPQVFNVTFRRAEDYPIDLYYLMDLSYSMKDDLENVKKLGTELQRRMKDVTSDFR
IGFGSFVDKTVMPFISTTPAKLRNPCGTREEVCTSPFSYRNVLPLTSNGSLFNELVSLQK
ISGNLDSPEGGLDAMMQVAACEDNIRWRNVTRLLVFSTDAGFHFAGDGKLGGIVIPNDGH
CHLDREGGYTKSDVYDYPSVAQLVQKLGDKNIQPIFAVNNEFHDVYRSLSELIPKSAVGV
LSSNSSNVIQLIIDAYNALSSEVILENTKVPEGVHVAYTAHCKYGETRTGDGGRACSNIQ
IGDEVTFSISVTATRCPNEGEDARLTIRPLGFNEKVEVTLQFVCECACHSLGTADSPECS
QGNGRLECGACRCNEGRIGRLCECSKDEVNSEDIQATCKRDNSSSVVCSGRGDCVCGECV
CHKRDNANEHVFGNLCECDDFSCDRAAGKICGGNGICDCGHCVCFPNFTGNACDCALGTH
GCEGRGGQICNGRGVCECGKCRCSEPRYQGATCELCPTCPEACEEHKDCVQCAAFANGPR
KETCEECGLKVRVVPELTQPGAVQQIVHCKQKDDDDCWFFFTFTGSGSNASVEVQEKREC
PAEPNVLAIIAGVVAGIVLIGLALLLIWKLLTSIHDRREFAKFEKEKLTAKWDTGENPIY
KSAVTTVVNPKYGGIQ
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggagtcggtgtgtctgcgcggcgctgctggtgaccttgactctgacgctgtct
ctgggtcagccagaattgcgaaatgagtgtcttttggccaacgcgaagtcatgcggtgaa
tgcatccagacagggagccgctgcagctggtgcacaaaatctaacttcaccgaggtcggg
gagcccaactcggcacgctgcgactacgtggagaacctgcgcgagcggggctgtggcgcg
gagcgcacggagaatccccggggcagccaggcgctgctgctcgaccgcccgctcagcgag
cgtgggcaaaagctatcgcccgaccacatcacacaggtcgccccgcagagactcacgctg
cgcctgcggtcgggtgagccgcaggtgttcaacgtgacgttccgccgtgcagaggactac
cccatcgatctctactacctgatggacctgtcctactccatgaaggacgacctagagaac
gtgaagaagctcggcacggagctgcagcgcaggatgaaggacgtgaccagcgacttccgc
atcgggttcggttcctttgtggacaagacggtgatgccattcatcagcacaacgcccgcc
aagctgcgcaacccgtgcggcacccgcgaggaggtgtgcaccagccccttcagctaccgc
aacgtgctgccgctcacgagcaatggcagcctgttcaacgagctcgtgagcctccagaag
atctcggggaacctcgactctcccgagggtggtctggacgccatgatgcaggtcgctgcg
tgcgaggacaacatccgttggcgcaatgtgacgcgcctgctcgtgttctccacggatgcc
gggttccactttgcgggcgacgggaaactgggtggcattgtcatacccaatgacgggcac
tgccacctggacagggagggcggctacacgaagagcgatgtctatgattacccgtccgtt
gcgcagctggtgcagaagctgggggacaaaaacatccaaccgatctttgctgtcaacaat
gagttccacgacgtctacaggagcctgagtgagttgatccccaagtcagcagtaggcgtg
ctttcttccaactcgtccaatgtgatccagctcatcatcgacgcctacaatgcgctgtcg
tcggaggtgatcctggagaacacgaaggtgccggagggagtgcacgtggcctacacggcg
cactgcaagtacggcgagacgcgcacgggcgacggtggccgcgcctgctccaacatccag
atcggcgacgaggtgacgttcagcatcagcgtgacggcgacgcggtgcccgaacgagggc
gaggacgcgcgcctcaccatccgcccgctcggctttaacgagaaggtggaggtgacgctg
caattcgtgtgcgagtgcgcgtgccactcgctcggaacagccgacagccctgagtgcagc
cagggcaacgggcgacttgagtgcggcgcttgccggtgcaacgagggtcgcatcggacgg
ctgtgcgagtgcagcaaagacgaggtgaactcggaggacattcaggcgacatgcaagcgc
gacaactcgtcgtcggtggtgtgcagcgggcgcggtgactgcgtgtgcggcgagtgtgtg
tgccacaagcgcgacaacgccaacgagcacgtcttcggcaacctgtgcgagtgcgacgac
ttctcttgcgaccgggccgccgggaagatctgcggcggtaatggtatctgtgactgcggc
cactgcgtgtgcttccccaacttcacggggaacgcgtgcgactgcgcgctcggcacacac
ggctgcgagggccgcggaggtcagatctgcaatgggcgcggtgtgtgcgagtgcggcaag
tgccggtgctcagagccacgctaccagggcgcaacctgtgagctgtgccccacctgcccg
gaggcgtgcgaggagcacaaagactgcgtgcagtgcgccgcattcgctaacgggcctcgc
aaggaaacgtgtgaagagtgtggcctgaaggtgcgcgttgtgcccgagctgacgcagccg
ggtgccgtgcagcagatcgtgcactgcaagcagaaggacgatgacgactgttggttcttc
ttcacgttcactggctctggcagcaacgcatccgtcgaggtgcaggagaagagagagtgc
cccgcggagcccaacgtgctggcgatcatcgcgggcgttgtggccggcatcgttctcatt
ggcctcgcactgctgctcatctggaagctgctgacatccatccatgaccggcgcgagttc
gccaagttcgagaaggagaagctcactgccaagtgggacacgggagagaacccaatctac
aagagtgcggtcaccacagtggtcaaccccaagtacggcggaatccagtga
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integrated database retrieval system
