Lethenteron reissneri (Far Eastern brook lamprey): 133345252
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Entry
133345252 CDS
T09663
Name
(RefSeq) double-stranded RNA-specific editase 1-like
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrj03041
]
133345252
Spliceosome [BR:
lrj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
133345252
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
DSRM_2
Motif
Other DBs
NCBI-GeneID:
133345252
NCBI-ProteinID:
XP_061411830
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All DBs
Position
21:complement(12662020..12874781)
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AA seq
1105 aa
AA seq
DB search
MSSGSVKENCLLSDSDDSQEAATAPVQGLSPSASGPEVGGLRGPAGGGLKRALEEENAGR
AAPRFRPKRRRRAGGLSLMALPMPFPLHAAFVPPPPHNQHTHHLAPTITTSSSYGATPLQ
PPPPPHHPLAPPTLLPSQPPPSLLLLLPPPPPPPNKNALMQLNELRPGLQYRVVSQTGPV
HAPRFTLAVDVNGDTFVGAGPTKREAKARAAERALRSFVQFPDAWEAHRAMGRAASALPA
NADFARDEQGEHEMRFDVADFASEPGVAVGGGGGCGVGDLADVGGSGGDCVAGGVGDGIS
GGNDGVVGDSGSVHGGIGSTSGGFGVDGDFNNGGGSGGGVADFPGRGIAAAVAVVLSTAT
TCSTISTQPMGSSSSSSSQIRSPSTTGRAGLHGHDTGFQNHGQLQVDQGQGSPLTRGSRM
EPSQGSPAPPEPSPLRHPTLTQLTPRPSEWAPRTLACRALKHNNNRGSHNNYNNNNNNTT
IDSSVHSRTLKGECCYYSWNDYRYNISSNNSSSGYSNSTQAAVTKRAPLALEADASVPHA
VAWAQRTHSGGGAAPSEDLQALESYQAPGWPPLGAVALFDAFSQVRNNPVWALGALHPDA
AFGDIAGPPGVPGAAGPTTAEGVSPRVVVQVTVGGCSFRGAARSKRVARSRAAQAALRAL
YGIGAAFRPARPPTVGPPQGLGENHAVLSQGLADRVARLVLDKFAELAGGRRGGGDGGRR
GGGDGGDGGAASRGGVAAALLERRKVLAGMVLTRGDGGPASEARVVCLATGTKCLHGEFM
SVAGLALNDCHAEVVCRRALLRYLYSQLQLLSSPVASERDSSVVEARAGGGGYRLRPGWR
LHLYVSTAPCGDARLFSTQEKEVGADRHPRRRARGQLRTKLECGEGTVPARRCQEPQTWD
GVLQGEPLLAMACSDKIARWNVLGVQGALLSRLLEPIYLHGLVLGSLYRPQHLWRAVCTR
VRGVTHLPGPYRLNAPRLACSSDPDVRRPGKAPVCCLNWSAGEPGLEAVSGATGKADGGQ
PSRLCKQALFARWAQLHPKLSVRVAPSACREHPEATPPGTYAEAKQAARDYQAAKQQLFR
GLRRAGLGDWVKKPLEQDQFCLQMP
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgagttccggcagcgtgaaggaaaactgcctcctgtctgacagcgacgactcccaagag
gcggccacggctcccgtgcagggtctctccccctctgcgtcggggcccgaagtgggtggt
ctgcggggcccggctggtgggggcctcaagcgggcgctggaggaggagaacgcgggacgg
gctgctccgcgcttccgccctaagaggaggcgccgtgcagggggcctctccctgatggcc
ctgcccatgccctttcctctgcacgccgcattcgttccgccacccccccataaccaacac
actcaccacctcgcacccaccatcaccaccagcagcagctacggggcaacaccgctgcag
ccaccaccaccaccacatcatccactcgcaccaccaacgctgcttccgtcacaaccaccc
ccgtcgctgctgctgctgctgccgcctccgccgccgccgcccaacaagaacgcgctgatg
cagctcaacgagttgcggccgggcctgcagtaccgcgtggtgtcgcagacggggcccgtg
cacgcgccgcgcttcacgctcgccgtggacgtgaacggcgacaccttcgtgggcgcgggc
cccacgaagcgcgaggcgaaggctcgtgcggccgagcgcgcgctgcgctccttcgtgcag
ttccccgacgcgtgggaggcgcaccgcgccatgggccgagccgcctctgcgctgcccgcc
aatgctgactttgcccgcgatgagcagggggagcacgagatgcgattcgatgtcgcggac
ttcgcgtctgagccaggggtcgccgtcggcggcggcggtggttgcggtgttggtgacctt
gcggacgtgggtggaagtggcggtgactgcgttgctggcggtgttggtgacggcattagt
ggcggtaacgatggcgttgttggtgatagcggcagtgttcatggcggtattggcagtacg
agtggtggttttggtgttgatggtgatttcaataacggcggtggtagtggcggcggtgtt
gccgatttcccaggaagaggaatcgcagcggccgtggcggttgtgttatccaccgccacc
acctgctctaccatctcgacacaacccatgggtagcagcagcagcagcagtagtcaaata
cgatcgcccagcactacgggccgcgcgggtctacatggacacgacacgggttttcagaac
catggacaactccaggttgaccagggacaggggtcacccttgacgcgtggctcacgcatg
gagccctcgcagggaagcccggcccctcccgaaccctccccactacggcaccccactctc
acgcagctcacgccgagaccatcagaatgggcgcctcggacacttgcgtgccgggcgctg
aaacacaacaacaaccgcggtagccacaacaactacaacaacaacaacaacaacaccaca
atcgactccagcgtgcactctagaactttaaagggcgagtgctgctactacagctggaat
gactacagatacaatatcagcagcaacaacagcagcagcggctacagcaacagcactcaa
gcagcggtcacaaagagagctcctctcgcgttggaagcggatgcgtccgtcccgcatgcg
gtcgcatgggctcagcggacgcattccggtggcggggctgctccaagcgaggatctgcag
gccctggagagctaccaagcccccgggtggcctccactgggcgcggtggcccttttcgac
gccttcagccaggtgcgcaacaatcccgtgtgggccctcggcgcgctgcatcccgacgcg
gccttcggagacatcgcgggaccccccggagtgcccggggcggctgggccgacgacggcc
gagggcgtctctcctcgtgtggtggtgcaggtgaccgtgggcggatgctccttcagggga
gcggcgcggagcaagagggtggctcggagccgcgcggcccaggccgccctgagggcgctc
tacgggataggggccgcgtttaggccggcccggccaccgaccgtggggcctccgcagggc
ctgggcgagaaccacgcggtgctctcgcagggactcgcggaccgcgtggcgcgcctcgtg
ctcgataagtttgcggagctggcgggaggacgacgaggaggaggagatggaggacgacga
ggaggaggagatggaggagacggaggagccgcgtcgcgtggcggggtggccgccgcgctc
cttgagcggcgcaaggtgctggccgggatggtgttgacccgcggcgacgggggtcccgcg
agcgaggcgcgcgtcgtctgcctggccacgggcaccaagtgcctacacggggagttcatg
agcgtggcgggcctggcgctcaacgactgccacgccgaggtggtgtgccgccgcgccctg
ctgcgctacctctactcccagctgcagctgctcagcagccccgtggccagcgagcgcgat
agctcggtggtggaggcgcgtgcaggcggcgggggctaccgcctgcggcccggctggagg
ctgcatctctacgtgagcacggcgccgtgcggggacgcccggctcttctccacgcaggag
aaggaggtcggcgcggaccggcacccgaggcggcgtgctcggggccagctgcgcacgaag
ctggagtgcggcgagggcacggtgccggcccgccgctgccaggagccacagacgtgggat
ggcgtcctccagggagaacccctcctcgccatggcctgcagcgacaagatcgctcgatgg
aacgtgctgggcgtgcagggcgcgctgctcagccggcttctggagcccatctacctgcac
ggcctggtgctgggcagcctctaccgcccccagcacctgtggcgagcggtgtgcacgcgc
gtgcgtggcgtcacgcaccttcccggcccctaccgcctcaacgcgccgcgcctcgcctgc
agcagcgatcccgatgtgaggcggccgggcaaagcgcccgtgtgctgcctcaactggagc
gcgggggagccgggtctggaagcggtgagcggagccacggggaaggcggacggtgggcag
ccttcccggctctgcaagcaagccctgttcgctcgctgggcgcagctgcaccccaagctc
agcgtccgcgtggccccttcagcctgccgtgagcacccggaggccaccccaccgggcacc
tacgccgaggcgaagcaagctgcgcgcgactaccaggcggccaagcagcagctgttccgc
gggctgcgcagagccggcctgggtgactgggtgaagaagcccttggagcaagaccagttc
tgcctgcagatgccctga
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