Lethenteron reissneri (Far Eastern brook lamprey): 133345373
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Entry
133345373 CDS
T09663
Name
(RefSeq) integrin alpha-8-like
KO
K06584
integrin alpha 8
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04510
Focal adhesion
lrj04512
ECM-receptor interaction
lrj04514
Cell adhesion molecules
lrj04810
Regulation of actin cytoskeleton
lrj04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133345373
04514 Cell adhesion molecules
133345373
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133345373
09142 Cell motility
04820 Cytoskeleton in muscle cells
133345373
04810 Regulation of actin cytoskeleton
133345373
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lrj04515
]
133345373
Cell adhesion molecules [BR:
lrj04515
]
Integrins
Integrin alpha subunits
133345373
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Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
ITGAX-like_Ig_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
133345373
NCBI-ProteinID:
XP_061412055
LinkDB
All DBs
Position
21:20342284..20464272
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AA seq
1074 aa
AA seq
DB search
MRTDRRQRHGGSCSNTGPAGSLLLLLLLLVVALSITQLGPTSAFNLDDSRPNVFSGPQGS
YFGYSLDFYSPESSSKGIVVGAPKAHTDAHPNVTQPGAVFMCLLREENCTRIPLGPPDER
YTQIRLGSPPERMEFKSHQWFGATVRTHGETLLACAPLYSWRTFKSEEAEQEPVGTCFLS
RGNFSSQAEYSPCRTGRSDQNGQGVCQAGFSADFTKAGWVVLGGPGSFFAQGQVMAASSK
VVFRQKSRFLLSRVEGQKETAETPANNDDTYMGYSVAVGEFTGDSVQEFVTGVPKGSSTF
GYVLILNTTDMSTLMNVTGEQLASYFGYTVAVTDVNNDGLDDLLVGAPLYMERGSQGRLE
ELGRVYLYLQQAPLSLGAAQTLSGRDVYGRYGSAITPVGDLDQDGYNDVAVGMPFGGEDG
TGVVFVYNGRDTGLMAIPSQTLRGRWASQGLPASFGFALRGGTDLDSNGYPDLIVGAFGV
DKAIVYRARPVVTVSAELTVSPMVLHPENRSCMVTGYATLQSCFSVEFCLKVSGKRIPDT
VGMEVEVLLDKLKEKGAIRRVLFQDSKSPRFRTRLQMGRGLQEQCSTLTAYLRDESEFRD
KLSPIVVSLNYSLDEEYNSNHSAVVPILNHYQADHIQKQAYILLDCGEDNICMPDLQLAG
YLERTELYMGDTSPLTLTLNCSNHGEGAYEAELQVAVPPEGDYIGSTRSSEGLGTGDGNL
FAPICTLKEENNTRLVVCDLGNPMKAGTNLLIGLRFDFKNMAYDSSSITFNANMKSTNKD
NPESQPLALRAELAVLAQVDIRGVSIPDATAIYAAEWKLAAPMSYQEEIGPSLQQVFEVH
NNGPSWVKAGWLDVKVPHQHDDDFLLYPLQIATEGPLNCTFSMPLNPLNLQPRLTSMEPT
DNSSTVAPSPNPRHVIVRREAGERPPAPRVLGCSSSQCLHVTCQLGLLPRRTSAVLILRS
RLWVPSFLKGGQNQVVLQTSAAFRVTEMPYKLLPDEFPSGSRVVNTTVVLVKAGFQRPVP
YWVIFLAVLAGLLLLALLVYALWKMGFFKRERYMHDEIPAEKAFLKPRQNGVEA
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgcggactgatcgtcgacaacggcacggggggagctgctcgaacacgggacctgctggt
agcctcttgttgcttctgctgctgctggtggtggcactctccatcacccagctgggaccc
acctctgccttcaacctggatgactcgcgtcccaacgtattctcgggacctcagggcagc
tattttggatactctttggatttctacagcccagagagctccagcaagggcattgtggtg
ggagcccccaaagcgcacacagatgcacatcccaacgtgacgcagcctggagccgtcttc
atgtgcctcttgcgtgaggagaactgcacacgcattcccctgggaccgcccgatgagcgg
tacacgcagattcgcttgggaagccctccggagcgaatggagttcaagtcgcaccagtgg
tttggagccaccgtcaggacacatggtgaaactctgctggcttgtgcgcccctgtacagc
tggcgcacattcaagagcgaggaggccgagcaggagcctgtggggacctgcttcctctcg
aggggaaacttctccagccaagccgagtactctccctgccgcacaggcagaagtgaccaa
aatggacaaggagtgtgccaagccggttttagcgctgactttaccaaggctggatgggtg
gtgcttggaggcccagggagtttctttgctcaaggccaggtcatggctgcctcctccaag
gttgtgtttcgccagaaatccaggtttctgctgtcccgagtggagggccagaaggagaca
gctgagactccggccaacaatgatgacacgtacatgggttattctgtggctgttggagaa
ttcacgggagactctgtgcaagagtttgtcaccggtgtgccaaaaggatccagtacgttt
ggatacgtgctcatcctcaacacaacagacatgagcaccctcatgaacgtcacaggagag
cagctggcttcctacttcggctacacggtggcagtcacggatgtgaataatgacggactg
gatgacctgctcgtgggcgccccactctacatggagcgcggctcccagggtcgcctggag
gagctgggccgcgtttatctttacctgcagcaggccccgctcagcctgggcgccgcacag
acgctgtcggggcgagacgtttatggccgctacggcagcgccatcacgccggttggagac
ctcgaccaggatggatataatgacgttgcagtgggaatgccgtttggaggggaggatggc
accggtgtggtgtttgtttataacgggcgagacacgggcctgatggctataccatcccag
acgctgcgtggacgctgggcatcgcagggcctcccggccagctttggattcgcactccgt
gggggaactgacctcgactcaaacggctacccagatttgattgttggagccttcggagtg
gacaaggccattgtgtatagggcgcgcccagttgtgacggtcagcgcggagctcacggtc
tcccccatggtgctgcaccctgagaacaggagctgcatggtgactggttacgctaccctg
cagtcctgcttttcagtggaattttgcctgaaggtttctggaaagagaatacctgatact
gtaggcatggaggtggaggtgctgctggacaagttgaaggagaaaggcgccatccgtcga
gtgctcttccaggactccaagtccccgcgcttcaggacgcgtctgcagatgggccgggga
cttcaggagcagtgctcaaccctcacagcgtatctcagggatgaaagtgaattccgggac
aagctgtctcccatcgtggtgtctctgaactacagcctggatgaagagtacaactcaaat
cacagcgctgtggtgccaattcttaaccactaccaggcagaccacatccagaagcaggcg
tacattttgctggactgtggagaagacaacatctgcatgccagaccttcagctcgctgga
tatctggagcgcacggagctctacatgggtgacacgagcccgctaacgctcacgctcaac
tgctccaaccacggcgagggcgcctacgaggcggagctgcaagtcgccgtgccccccgag
ggggactacatcggcagcacgcgcagcagcgaggggctgggaacgggagatgggaatctc
ttcgccccaatctgcaccctgaaggaggagaacaacacgaggttggttgtttgtgacctg
gggaacccaatgaaagctggaacgaatcttctgattgggctccggtttgatttcaaaaac
atggcttatgacagctcatccatcacattcaatgccaacatgaaaagcaccaacaaagac
aacccggagagtcagcccctcgctctgcgcgccgagctggctgttttggcacaggttgac
attcggggcgtgtcgataccagatgcaacagccatctatgctgcagagtggaaattggcc
gcacccatgtcttatcaggaggagatcggaccttcactccagcaagtatttgaggtccac
aacaatgggccgagctgggtgaaggcaggctggttggacgtaaaggtgccccaccagcat
gatgacgacttcctactctacccgctgcagatcgccactgaagggcccctcaactgcacg
ttcagcatgcccttgaacccgttgaatctacagccacgtttgacttcaatggagccgacc
gacaattccagcacagtggcaccatcgccaaaccctcgccacgtcatcgtgcgcagggag
gccggggagcgaccaccggcgccacgcgtgctgggttgcagcagcagtcagtgcctgcat
gtcacctgccagctgggtttgctgccgcgacgtacaagcgccgtgcttattcttcgctcc
cgactctgggtccccagcttccttaagggaggacaaaatcaagtcgtcctacaaaccagt
gctgctttccgggtcactgagatgccctacaaactacttcctgatgaattcccatcagga
agcagagtggtgaacacgacggtggttcttgtgaaagcggggttccagcgccccgtgccc
tactgggtgattttcttggctgtgctagccgggctgctgctcttggccctgctcgtctat
gccctgtggaagatgggatttttcaagcgggagcgctacatgcatgatgagattcccgct
gaaaaagcatttctcaagccgcggcagaatggagtggaagcctga
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