Lethenteron reissneri (Far Eastern brook lamprey): 133345382
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Entry
133345382 CDS
T09663
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrj04131
]
133345382 (VPS50)
Membrane trafficking [BR:
lrj04131
]
Protein recycling
Others
EARP complex
133345382 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
133345382
NCBI-ProteinID:
XP_061412069
LinkDB
All DBs
Position
21:20991353..21097585
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AA seq
961 aa
AA seq
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MQKIKSLMSRQVSKSFSENLSESALQHEPPKTPHKEELPDTPCNPEAEQEVIDSIEKVYF
DDEAFDPVRYELEKLPEVMQLAELEEYRDRLKRQQAVVSKKVADLILEKQSAYVQELSRV
TELQTSLHEAKAICCDGRGQLGVAQQGFTAASLGLLANQRKRQLLIGLLKSLRTIKTLQR
TDVRLSEMLEEEDFPAAIQLCLECQNAVSSFSHYSCISELNSKLQDTLEQIEEQLDVALA
KTCKLFDVVHYTKVQTAYRLLDKTQTAMDQMHMHFTQAIHNTAFQVVLGYVELCASGADT
RFHKLQYKDLCSHVTVDSYIPCMTDLCKALWEVMHSYYQTMEWHREHDGEVSLPEAEEPC
FDRSYVQKKLEHGLTRIWQDVQQKVKTYILGTDLAHFKYDDFIFVLDIINRLMDIGDEFC
SSKSEGLQESIRKQSLNYFKNYHRTRMEELRMFLENEAWELCPVRSNFSIFQLHEFKFLA
QGRGGGVGLVPTSSPSKMAATPGATPTTPVIGSFPSHCNPFESLRQDQDDDSDDVLAANG
YDSEEGEKSPYQDEDSDSDVADELKRDFVDEQTGETPVRSVSKDSVRVKRKSESHYSLNK
MNAPILANTTLNFIRLFGRYLQMMSVLQPIAFDVVQYMSQLFDYYLYAVYTFFGREHMFE
TTGLGLISNRLRTTLNRIQESLIDQEAQTDPVVSVPEERREKVPCPHLSRLVDLIRTDTL
YGLAERIVATESLVFLAEQFEFLQNQLDAMIPQAKKPFLQQFYSQTVSTVGELRKPVYWM
VAAKAIDYEHALLLMAGVKWDVREIMSQHSPYVDSLLKEFEAFSRRLAEISKRVRIPVPV
SNVLWEHCIRLANRTLVEGFASAKKCSTEGRALMQLDFQQFLLKLERLTDLRPIPDKDYV
ETYIKAYYLTEGDMERWIKEHREYSSRQLNSLVNVCVGTHINKRAKQRLLTAIDESDRPK
R
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagataaagtcgctcatgagccggcaggtctccaagagtttttctgagaatttg
agcgaaagtgcattacaacatgaacctccaaagactccacacaaggaggagctgccagat
actccttgtaaccccgaggcagagcaggaggtgatcgacagcattgagaaggtctacttc
gacgatgaggccttcgaccccgtgcgatatgagctggagaagctgcctgaggttatgcag
ctggccgagctggaggagtaccgggacaggctgaagcggcagcaggcagtggtgtccaag
aaggttgccgacctgatactggagaagcaatcagcctacgtacaggaactcagcagggtg
accgagctgcagaccagcttgcacgaagccaaggccatctgctgtgatggacgggggcag
ctgggggttgcccagcaaggcttcacagctgccagccttggcctgctcgccaaccagcgc
aagcgccagctcctcatcggcctactgaagtccttgcgtaccatcaagacgctgcaaagg
acagatgtgcgactgagcgagatgctagaggaagaagatttccctgctgccattcagctc
tgcctcgagtgccagaatgctgtcagctcattcagccactactcttgcatcagtgaactc
aattcaaagcttcaggacaccttggagcaaattgaggaacagctggacgtggcattggcc
aagacgtgcaagctgttcgatgtcgtgcactataccaaggtgcagacggcgtaccgactg
ctggacaagacgcagactgccatggaccagatgcacatgcacttcacgcaggccatccac
aacacagcctttcaagtggtgcttggctacgtggagttgtgtgcttccggcgcggacact
cgcttccacaagctgcagtacaaggacctgtgctcgcacgtgaccgtggacagctacatc
ccctgcatgacggacctgtgcaaggcgctctgggaggtgatgcacagctactaccagacc
atggagtggcatcgcgagcatgacggtgaggtgtcactcccagaggcggaagaaccatgc
ttcgatcgcagctatgtgcaaaaaaagctggagcacggcctgactcgtatctggcaggat
gttcagcagaaggtcaaaacctatatcctgggaaccgacctggcgcactttaaatacgac
gacttcatatttgtgctggacatcattaaccggttgatggatattggcgatgagttttgc
agcagcaagtcagagggtctgcaggagtccatccggaagcagagcctcaactatttcaag
aactaccacaggactcgtatggaggagctgcgaatgtttttggagaatgaggcatgggaa
ctgtgtcctgtgcgctccaacttcagcattttccaactgcacgagtttaagttcctagca
cagggccgaggaggcggtgtcggactggtacccacgtcctcaccaagcaagatggcagcc
actcctggtgccacccctacgacccccgtgatcggaagcttcccctcccactgcaacccc
tttgagagtctccggcaagaccaggacgacgactcggatgacgtactcgcagccaacggg
tacgactcggaagaaggagagaagagtccgtaccaggatgaggacagcgacagcgacgtt
gctgacgagctcaagagggactttgtggacgagcagactggagagacgcctgtcaggagc
gtttcgaaggactctgtacgagtgaaaagaaaatcggagtcacactacagcttaaacaag
atgaacgctcccattctcgccaacaccactctcaacttcatccgcctcttcgggaggtac
ctgcagatgatgagcgtgctgcagccaatcgcgtttgacgtggtacagtacatgtcgcag
ctcttcgactactacctgtacgccgtgtacacattcttcggacgcgagcacatgttcgag
acaacaggactggggttgatcagtaaccgtttgcgcacaaccctcaatcgcatccaggag
agcctcattgaccaggaggctcagacagaccctgtggtgagtgtgccagaggagcgcagg
gagaaggtgccctgcccgcacctcagccggctggtggacctgatacgcacggatacgctg
tatggtctcgcggaaaggatcgttgccaccgagtccctggtgttcctggcggagcagttt
gagtttcttcagaaccagctcgatgcgatgatccctcaagccaaaaagcccttcctacag
cagttctactcccagacggtgagcacggtgggcgagctgcgcaagccggtctactggatg
gtggcggccaaggccatcgactacgagcatgcgctgctgctcatggccggcgtcaagtgg
gacgtgcgcgagattatgtcacagcacagcccctacgtggactcgctcctcaaggagttt
gaggcgttcagcaggcgactggcagagatctcgaagagagttcgtattcccgtgcccgtc
tcgaacgtcctgtgggagcattgcatccgcctagcaaaccgcaccttggtggagggattt
gcgagcgccaagaagtgcagcacggagggacgagcgctcatgcagctcgacttccagcag
ttcctgctcaagctggagcgactcacagacctgcgcccgatcccagacaaggactacgtg
gagacgtacatcaaggcctactacctgaccgagggggacatggagcgctggatcaaggag
caccgggagtactcatcccggcagctgaacagcctggtgaacgtgtgcgtgggaacgcac
atcaacaagcgcgccaagcagcgcctgctcaccgccattgacgagtccgatcgccccaag
cgctag
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integrated database retrieval system
