Lethenteron reissneri (Far Eastern brook lamprey): 133345642
Help
Entry
133345642 CDS
T09663
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03015
mRNA surveillance pathway
lrj04261
Adrenergic signaling in cardiomyocytes
lrj04382
Cornified envelope formation
lrj04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133345642
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
133345642
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
133345642
09158 Development and regeneration
04382 Cornified envelope formation
133345642
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lrj01009
]
133345642
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrj03019
]
133345642
03036 Chromosome and associated proteins [BR:
lrj03036
]
133345642
Protein phosphatases and associated proteins [BR:
lrj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
133345642
Messenger RNA biogenesis [BR:
lrj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
133345642
Chromosome and associated proteins [BR:
lrj03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
133345642
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_WDR3_1st
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
DSE1_N
WD40_Gbeta
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
133345642
NCBI-ProteinID:
XP_061412570
LinkDB
All DBs
Position
22:complement(12137395..12355418)
Genome browser
AA seq
477 aa
AA seq
DB search
MECFLCHFSAVLKSAVGTSFSPLCFSQGAGGRAVSVGVGSRGTLGGLLHGDAAGADIIST
VEFNHTGDLLATGDKGGRVVIFQREQESKNQPQHRGEYNVYSTFQSHEPEFDYLKSLEIE
EKINKIRWLPQQNAAQFLLSTNDKTIKLWKISERDKRAEGYNLKEEDGRLRDPTTITALR
VPVLKPMDLMVEASPRRIFANAHTYHINSISVNSDNETYMSADDLRINLWHLEITDRSFN
IVDIKPANMEELTEVITAAEFHPLQCNMFVYSSSKGTVRLCDMRASALCDRHSKLFEEPE
DPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLTVKVWDLNMETRPIETYQVHEYLRSKL
CSLYENDCIFDKFECAWNGTDSVIMTGSYNNFFRMFDRGTRRDVTLEASRENSKPRAVLK
PRRVCAGAGGGKRKKDEISVDSLDFNRKILHTAWHPSENIIAVAATNNLYIFQDKIN
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggagtgcttcctttgccacttctcggccgtgctcaagtccgccgtgggcacgtcgttc
tcgccgctctgcttcagccaaggtgcgggcggcagggcggtgtccgtcggggttggctcc
cgcgggactctgggggggctgctgcacggcgatgctgccggcgcggacataatctccaca
gtagagttcaaccacacgggagatctccttgcgacgggagacaagggtggccgcgtcgtg
atcttccagcgagaacaggagagcaaaaaccagccgcagcaccgcggagagtacaacgtc
tacagcaccttccagagccacgagcccgagttcgactacttgaagagcttggagatcgag
gagaagatcaacaagatccggtggctgccgcagcagaatgcggcccagttcctgctctcc
acaaatgacaagacgatcaagttatggaagataagcgagcgggacaagcgagccgaaggc
tacaacctgaaggaggaggatgggagactacgagaccccaccaccatcacagctcttcgt
gtgcctgtgctgaagcccatggacctgatggtggaggcgagtccacggcgcatcttcgcg
aacgcgcacacctaccacatcaactccatctccgtaaacagcgacaacgagacgtacatg
tccgcagacgacctccgcatcaacctctggcacctcgagatcacagatcgcagcttcaac
attgtcgacatcaagccggcgaacatggaggagctgacggaggtgatcacggcggccgag
ttccacccactgcagtgcaacatgttcgtctatagcagcagcaagggcaccgtgcggctg
tgcgacatgcgtgcctcggccctctgcgaccgccactcaaaactgtttgaggagcccgag
gaccccagcaatcgctcattcttctcggagatcatctcgtccatctccgacgtgaagttc
agccacagtgggcgctacatgatgacgcgcgattacctcacggtcaaagtgtgggacctc
aacatggagacccggcccatcgagacgtaccaggtgcacgagtacctgaggagcaagctg
tgctccttgtacgagaacgactgcatcttcgacaagtttgaatgtgcatggaacggcact
gacagcgtcatcatgacggggtcgtacaacaacttcttccgcatgttcgatcgagggacg
cgacgggacgtgacgctggaggcgtcgcgcgagaacagcaagccgcgcgccgtgctcaag
ccgcggcgcgtctgcgccggcgcgggcggcggcaagcgcaagaaggacgagatcagcgtg
gacagcctcgacttcaatcgcaagatcctgcacacggcctggcacccgagcgaaaacatc
atcgccgtggccgccaccaacaacctgtacatcttccaggacaagatcaactag
DBGET
integrated database retrieval system
