Lethenteron reissneri (Far Eastern brook lamprey): 133345774
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Entry
133345774 CDS
T09663
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX3 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
133345774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrj04121
]
133345774
Enzymes [BR:
lrj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133345774
Ubiquitin system [BR:
lrj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133345774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-RING_10
zf-RING_6
zf-C3HC4_4
zf-rbx1
zf-RING_11
RING_XB3-XBAT31
zf-Nse
Baculo_IE-1
Motif
Other DBs
NCBI-GeneID:
133345774
NCBI-ProteinID:
XP_061412729
LinkDB
All DBs
Position
23:complement(13844264..13851242)
Genome browser
AA seq
242 aa
AA seq
DB search
MKVNKTPTLSAVRLRCLHAPVRTCMAMDLDQISMGVGAQRTIVMNDESTHHDPRREDDDS
CSICMDGFTKMVTLDKCKHSFCKACIEQAMKIKPVCPVCITFYGKIEGNQPKNGTMSSSV
DSKSHLPGHEEYGTIIIKYNFPHGVQKAEHSNPGVKFYGARRTAYLPDSPEGRHVLSLLE
KAFTQRLIFTVGTSTTTGLQNCVTWNDIHHKTSKHGGPESYGYPDPDYLHRVKEELKANG
IY
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgaataagacgccaactttaagcgccgttcgcctgcgttgtctccacgctcca
gtgcgaacgtgcatggccatggatctcgatcaaatatccatgggggtgggagcacagagg
acgattgtaatgaatgatgagagcactcatcacgatccaagacgggaagatgatgacagc
tgttcaatttgcatggacggcttcacaaagatggtcaccctggacaaatgcaaacactct
ttctgcaaggcgtgcatagagcaagcaatgaaaatcaaaccagtgtgtccagtatgtatc
acattttatggaaaaattgaaggcaaccagcctaagaacggaaccatgtcctcatcagta
gactcgaagagccatctgcccggccatgaagaatatggcactatcattataaaatataac
tttcctcatggtgtgcagaaggccgagcattcaaaccctggagtcaaattttacggggca
agaaggacggcgtacttgcccgactcgccagagggacggcacgtgctttccctcctggag
aaagcttttactcagcggctcatcttcactgtagggacgtccacaaccacgggattacag
aactgcgtgacctggaacgatattcaccataaaaccagtaaacatggtggacctgaaagt
tatggatatcctgaccctgattacctgcaccgagtcaaagaagagctgaaggccaatggc
atctactga
DBGET
integrated database retrieval system
