KEGG   Lethenteron reissneri (Far Eastern brook lamprey): 133345827
Entry
133345827         CDS       T09663                                 
Name
(RefSeq) integrin alpha-8-like
  KO
K06584  integrin alpha 8
Organism
lrj  Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04510  Focal adhesion
lrj04512  ECM-receptor interaction
lrj04514  Cell adhesion molecules
lrj04810  Regulation of actin cytoskeleton
lrj04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:lrj00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    133345827
   04514 Cell adhesion molecules
    133345827
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    133345827
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    133345827
   04810 Regulation of actin cytoskeleton
    133345827
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:lrj04515]
    133345827
Cell adhesion molecules [BR:lrj04515]
 Integrins
  Integrin alpha subunits
   133345827
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 ITGAX-like_Ig_3 OAD_gamma LYRIC Integrin_alpha
Other DBs
NCBI-GeneID: 133345827
NCBI-ProteinID: XP_061412828
LinkDB
Position
23:complement(1802440..1928921)
AA seq 1053 aa
MARVLPLLLLRLSVPWSGLVHPGWGFNLDTTTGVEYAGPPGSYFGYAVDLYTQPDAIGML
IGAPRANTSQPGVTEGGAVYLCPWGRDGARPSCHPIPFDLTGDRMLTLPTGVRDRVDYKS
RQWFGASLRALRSSVMACAPLYRWRTLRPAREREPVGTCYVAHGNFSSFAEYSPCRRGNP
DPPGQGSCQGGFSVDFTDAGTAVLGGPGSFYWQGQLIAAPLRAVLGSHNETYINQAVQGE
TQSRARQSSHDDSYMGYSVAVGEFTGDLQQEYVTGVPKGLRSVGYVAILEADNMTSVHNF
SGEQMASYFGFAVAVTDVNGDRLDDVLVGAPLFMRRVSESSLREVGRLYAFLQERPLSFR
EPQTVDGPHTYTRFGSAIAPLGDLDQDGYNDVAVGAPFGGEDQRGLVHVYSGSRDGLRTS
PTQVLQGQWASAGVLPGFGYSLRGAVDVDGNGYPDLLVGAFGVSKAVLYRARPVVILDVE
LQLLPQMINTESKDCKMPGSGAPVSCFTVKVCLSAVGKSVPATMEVDFQVQLDRLKLKGS
GRRALFLLSQTSLHEQRLSLANRARPHCVALLAFLRGESEFRDKLTPISVGLNLSLDEQA
RRGPHGLHPVLHPYSPQHVSKQAYILLDCGEDNVCIPKLKLSVTWDRKALLVGEENLVTL
ALVARNAGEGAYEAELVLVLPPEADYVGIVRNESLTLLSCSYKAENASRSVLCDLGNPMA
GQSSIALGLRFSVKRLEQAGPNVTFEVHVRSANQEAHEHVFEAVTLPVRVSAQLDLRGVS
LPPQLVLPLPDWAPPSAELSTEEQVGPLVLHVYELRNSGPASVGPSQLEVALPEKLKDQF
VLYLLELATEGPLTCKLDRPANPLQLQMSMTGAEMLLNDSWAEPWQSLRRRRRRTLLHLR
ALAADKGRTLNCSWAECAHVRCDVGVLHKGESAVLKVRARLWADTFLKRENQKFSIQALA
RFDVMQVPYRIKPSEYPSGSVVVQSKVLWARSDSSLPLPFWAVLLAVFSGLLLLSLLVFA
MWMVGFFHRKRPPQKDETNQQTQAAPASNGHEA
NT seq 3162 nt   +upstreamnt  +downstreamnt
atggcacgagtgctgccgctcctgctgctgcggctcagcgtgccgtggagtggtctcgtt
cacccgggctggggattcaacctggacacgacgacgggcgtggaatacgcggggccaccc
ggctcctacttcggttacgcggtggatctgtacacgcagccagacgccattggcatgttg
atcggggctccgcgggccaacacgtcccagcccggagtgacggagggcggagcggtctac
ttgtgtccctggggccgcgatggggcccgtccctcctgccaccccatcccgttcgacctc
acaggtgaccgcatgctgaccctgccgacgggcgtccgggacagggtggactacaagtcg
cgccagtggttcggggcgagtctgcgcgccctccgctccagcgtcatggcgtgtgccccg
ctctaccgctggagaacgctgcgccctgcgcgcgagcgcgagcctgtgggcacctgctac
gtggcgcacggaaacttcagcagcttcgccgagtactcgccctgccgcagaggcaatcct
gacccgccgggtcaaggctcctgccaaggagggttcagcgtcgatttcacggacgcgggg
accgcggtgctgggggggccgggcagcttctactggcaagggcagctgatcgcggcccct
ctgcgcgcggtgctgggcagccacaacgagacgtacatcaaccaggcggtgcagggggag
acgcagagccgggcgcggcagtcctcgcacgacgacagctacatggggtactctgtggct
gttggagaatttactggtgatttgcagcaagagtacgtgacaggagtccccaaggggttg
cgctccgtgggatatgtagcgatcctggaagcggacaacatgacctccgtgcataacttc
agcggcgagcagatggcttcctacttcggcttcgccgtggcggtcacggacgtcaatggt
gaccggctggacgacgtgctggtgggagcgccgctcttcatgcgccgcgtgtccgagagc
tcgctgcgcgaggtcggccgcctctacgcgttcctgcaggagcggccgctctccttccgg
gagccgcagaccgtcgacggcccccacacctacacgcgcttcggcagcgccatcgccccg
ctgggcgacctggaccaggacggctataacgacgtggcggtgggcgccccgtttggcggg
gaggaccagcgcggcctggtgcacgtctacagcggcagccgggacggcctcaggacgtct
cccacgcaggtgctgcagggacagtgggcgtctgccggcgttctgcccggcttcggctac
tcgctgaggggcgccgtggacgtggacgggaacgggtacccagatttgttggtgggggct
tttggagtgtccaaggccgtgctgtacagggcccggccggtcgtgatcctggacgtggag
ctgcagctgctgccgcagatgatcaacaccgagagcaaggactgcaagatgcccggctcg
ggtgcccctgtgtcatgcttcacagtcaaggtctgtctctcagcggttggcaaaagtgtt
cctgcaacaatggaggtagatttccaggtgcagctcgaccggctgaagctgaagggctcg
gggcgacgggccctcttcctgctgtcccagacgtcgcttcacgagcaacggctcagcctg
gccaaccgggcccggccgcactgcgtggccctgctcgcctttctcaggggcgagtcggag
ttccgtgacaagctcacgccaatctccgtgggcctcaacctcagcctggatgagcaggcg
aggcggggccctcacggcctccaccccgtcctccacccctacagcccgcagcacgtcagc
aagcaggcctacatcttgcttgactgtggtgaggacaatgtctgcatccccaagctgaag
ctctcggtcacgtgggaccgcaaggcgctgctggtgggggaggagaacctggtgacgctg
gcgctcgtggcacggaacgcgggcgagggcgcctacgaggcggagctcgtcctcgtgctg
ccccccgaggccgactacgtgggcatcgtccgcaacgagtcgctgactttgctgagctgc
tcctacaaggctgagaatgcatcccggagcgttctgtgcgacctgggcaaccccatggcc
ggccagagcagcatagcgctgggcctgcgattcagcgtcaagcggctggagcaagcgggg
cccaacgtcacgttcgaggtgcacgtcaggagtgcgaaccaggaggcccacgagcacgtg
tttgaggctgtgacgctgcccgtcagggtctccgctcaactcgacctccgtggggtgtct
ctgccgccccagctggtgctgcccctgcccgactgggccccgccgagcgccgagctgagc
accgaggagcaggtggggccgctggtgctgcacgtctacgagctgcgcaacagcggcccg
gccagcgtggggcccagccagctggaggtggccctgccggagaagctcaaggatcagttt
gtgctctacctcctggagctggcgaccgaggggcccctcacctgcaaactggaccgccca
gccaaccccctgcagctgcagatgagcatgacgggagcggagatgctgctgaacgactcg
tgggccgagccgtggcagtcgcttcgccgccgtcgccgccggacgctgctgcatctgagg
gccctggccgcggacaaggggcgcacgctgaattgcagctgggccgagtgtgcccacgtg
cgctgcgacgtgggcgttctgcacaagggagagagcgccgtgctgaaggtgcgggcccgg
ctctgggccgacaccttcctcaagagagaaaaccagaagttttccatccaggccttggcc
aggttcgacgtgatgcaggtgccctaccgaataaagccctcagagtaccccagcggcagc
gtggtggtacagagcaaggtgctgtgggcccgctctgactcgagcctgccgctgcccttc
tgggccgtgctgctcgccgtcttctcggggctgctgctgctctccctgctcgtcttcgcc
atgtggatggtgggctttttccaccgcaagaggcccccacagaaggacgaaaccaaccag
cagacccaggcagccccagcgtccaacggccacgaggcgtga

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