Lethenteron reissneri (Far Eastern brook lamprey): 133345909
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Entry
133345909 CDS
T09663
Symbol
TSEN34
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lrj03016
]
133345909 (TSEN34)
Enzymes [BR:
lrj01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
133345909 (TSEN34)
Transfer RNA biogenesis [BR:
lrj03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
133345909 (TSEN34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
133345909
NCBI-ProteinID:
XP_061413007
LinkDB
All DBs
Position
3:7799699..7807437
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AA seq
472 aa
AA seq
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MSDQQEGPLLVHVSAGGAALLWSAAEARDLRERHGIAGSPAGSLARQPRQNSRLGLPVIL
MAEEARLLAETGAAVLVRPSAAEEGDGEEMERRVQELEEERERGFREQRRLAIRERRARM
RGGLAATIARGREAKRRKTRGGPGDGGEGGGETRGGDGMGGGGSGDGMGGGGGGGETRGG
DGMCGGGDGMGGGGDGMGGGGGDGMGGGGGGGETRGGDGMGGGGGGETRGGDGMSGGGVT
RGGDGMGGGGGGGRGDFEDAGEERPELTFEPAEDAGERDKVTAESGEQKLEDMELGEACV
DHHDAGQEAEEDNATAAAAGDDKDDEDDDEDDDDDDAGLQFTRESMLVQVRTASATRTLR
VVEWRAASSLWPHPALPHHELRYRVYRDLQRRGLHLTSGAKFGGDFLVYPGDPLRFHSHF
IALCHDDERPMALVELLAAARLGSNVKKTVLLCSPMPRDGVRYTSLQWSGWK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaccagcaggagggacccctgctcgtccacgtgtccgcgggcggcgcggcgctg
ctgtggagcgcggccgaggcgcgcgatctccgggagcgtcacggcatcgcgggctccccc
gcgggctccctggcgcggcagccccggcagaactcgcgcctgggcctccccgtcatcctc
atggccgaggaagcgaggctcctggccgagacgggagccgccgttctcgtgaggccctcg
gcggcggaggagggcgacggcgaggagatggagcgcagggtgcaggagctggaggaggaa
cgggagcgagggttcagggagcagaggcgcctcgccattcgggagcgcagggcgcgcatg
cgggggggtctggctgccaccatcgcccggggacgcgaggcgaagcggcgcaagacgcgg
gggggacccggcgacggcggtgaaggaggaggagagacgcggggtggagatgggatgggt
ggtggtggtagtggagatgggatgggtggtggtggtggaggaggagagacgaggggtgga
gatgggatgtgtggtggtggtgatgggatgggtggtggtggagatgggatgggtggtggt
ggtggagatgggatgggtggtggtggtggaggaggagagacgaggggtggagatgggatg
ggtggtggtggaggaggagagacgcggggtggagatgggatgagtggtggtggagtgacg
aggggtggagatgggatgggtggcggtggaggaggaggtaggggagactttgaggatgcc
ggtgaggagagacctgagttgaccttcgaacctgctgaggatgctggtgagagggacaag
gtgacggctgagagtggcgagcaaaagttggaggacatggagcttggcgaggcgtgcgtg
gaccaccacgatgccggccaggaagccgaggaggacaatgccactgctgctgctgctggt
gacgacaaggacgacgaggatgatgatgaggacgacgatgatgatgatgctggtctccag
ttcacgcgagagagcatgctggtgcaggtgcgcacggcgagtgccacgaggaccctgcgt
gtcgtggagtggcgagcggcctcttcgctgtggccccacccggcgctaccgcaccacgag
ttgcgctaccgcgtctaccgcgacctgcagcggcgtggcctgcacctcacgagcggagcc
aagttcgggggagacttcctcgtctaccccggagaccccctgcgcttccactcgcacttc
atcgcgctgtgtcacgacgacgagcggccgatggcgctcgtggagctgctcgcggcggcg
cgtctcggcagcaacgtgaagaagacggtgctgctgtgctcgcccatgccccgagacggc
gtccgctacacttccctgcagtggagtggctggaagtag
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