KEGG   Lethenteron reissneri (Far Eastern brook lamprey): 133345967
Entry
133345967         CDS       T09663                                 
Symbol
WDR48
Name
(RefSeq) WD repeat-containing protein 48
  KO
K15361  WD repeat-containing protein 48
Organism
lrj  Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:lrj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    133345967 (WDR48)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lrj03400]
    133345967 (WDR48)
DNA repair and recombination proteins [BR:lrj03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     133345967 (WDR48)
SSDB
Motif
Pfam: DUF3337 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_EML_2 Beta-prop_TEP1_C Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_SCAP NBCH_WD40 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_DCAF12 ANAPC4_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th WDR54 Beta-prop_DCAF4 WD_LRWD1 Beta-prop_IP5PC_F Beta-prop_Vps41 Beta-prop_HPS5 WD40_RFWD3 RAWUL WD40_like Beta-prop_VPS8
Other DBs
NCBI-GeneID: 133345967
NCBI-ProteinID: XP_061413113
LinkDB
Position
23:10993038..11003034
AA seq 677 aa
MATHHRQNPTARRKVQVSYVIRDEVERYNRSGVNALQLDHSLNRLFTAGRDSIVRIWNVS
QHKQDPFIASMEHHTDWVNDVVLCCNGRTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKEQVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMG
TIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNDTFTQVYSGGRDRKVYCTDLRNPDIRVLICEEKAPVLKL
ELDRSADPPPAIWVATTQSSVNKWSLKGHNFRMSGDYDNDCAGSITPLCTQPEQVIKGGA
SIIQYNILNDKRHILTKDTNNHVAYWDVLKACKVEDLGTMDFDEEIKKRFRMLYVPNWFS
VDLKIGMLTITLEENDCFAAWVSAKDAGFASQDGADPKLNFGGLLLQALLEHWPRTHVGP
MEDDDIEMSQVNGEPENRVVTKGNGYFLVPPHTPVIFTEAGGRTLFRLLCRDAGGETESV
LLNETVPQWVVDVAVDKNMPKFNKIPFYLQPHSNSGAKTLKKDRLSASDMLQVRKVMEHV
YEKIINAETESQTPNSPNNDKTREMDKEEDIAALAEEKIELLCQDQVLDPNMDLRTVKHF
IWKSGGDLTLHYRQKFP
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggcgacgcatcatcggcagaacccgaccgcccggcggaaagttcaggtatcgtatgtg
atcagggatgaagtcgagcggtacaatcgtagtggcgtcaatgccttgcaacttgaccac
tcacttaacagactatttacagctgggcgggactccatcgtcagaatatggaatgtcagt
cagcacaagcaagatcccttcattgcctcaatggagcaccacacagactgggtcaatgat
gttgtgctctgctgtaatggaagaacattaatatctgcatcatcagacacaactgtaaag
gtgtggaatgcacacaaaggcttctgtatgtccactttaaggactcacaaggattatgtc
aaagcactggcttatgctaaagataaagagcaagtggcatctgctggtctggacaggcag
atcttcctctgggatgtgaacacattaacagctttaacagcttccaacaacacagttact
acatcttctttaagcggaaacaaagattctatctatagtttggccatgaaccagatggga
accatcattgtatcaggatcaacagaaaaggttttgcgtgtctgggatccacgaacatgt
gcaaagcttatgaaactgaagggccacactgacaatgtcaaggcactactactgaacaga
gatggaacacagtgcttatcaggcagctccgacggcactatccggctgtggtcgctgggc
cagcagcgctgcatcgcgacgtatcgcgtgcacgatgagggcgtgtgggcactgcaggtg
aacgacaccttcactcaagtgtattcgggtggacgtgaccgcaaggtttactgtactgac
ctgcgcaaccccgacatacgagtgctcatctgcgaggagaaggcacctgtgttgaagttg
gagctcgacagatcggcagatcctcctccagctatttgggttgcaacaacacagtcttcc
gtcaataaatggtctctaaagggtcacaatttccggatgtcgggagattacgataatgac
tgtgctggctccatcacaccattatgtacacagccagagcaagtaatcaaaggtggtgca
agcatcattcaatacaacattctaaatgacaagaggcacatcttgacaaaggacaccaac
aatcatgtagcatattgggatgttcttaaggcatgtaaagtggaagacttgggcacaatg
gattttgatgaggaaataaagaagcgatttaggatgctgtatgtgccaaattggttctca
gttgacctaaagattgggatgctgactattaccttggaggaaaatgactgttttgccgcc
tgggtctctgctaaggatgctggctttgccagccaggatggcgctgaccctaagttaaac
tttggagggctgcttcttcaggcactgcttgagcactggcctcggactcatgtggggcca
atggaagatgatgacatcgagatgagccaagttaatggtgagccagagaacagagtggtg
acaaagggtaatggatactttctagttcctccacacacgcccgttatattcactgaagca
ggaggacgcacactgttcaggcttctgtgcagagatgctggtggagaaacagagtctgtg
ctgttgaatgagactgtgcctcagtgggtggttgatgtggctgtggataaaaatatgcca
aaattcaacaaaatacccttctaccttcaacctcactcgaactctggagctaaaacatta
aagaaggatcgcctctcagccagcgacatgcttcaggtgcgcaaggtcatggagcacgtc
tacgagaaaataatcaatgccgagacagagtcgcagaccccaaactcgcccaacaatgac
aaaactcgggagatggacaaggaggaagacattgctgctttggccgaagaaaaaatcgag
ctcctctgccaagatcaggtccttgatccaaacatggatctcaggacagtaaagcatttc
atctggaagagtggaggggacctgacactccactaccgacagaagtttccttga

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