Lethenteron reissneri (Far Eastern brook lamprey): 133346042
Help
Entry
133346042 CDS
T09663
Name
(RefSeq) E3 ubiquitin-protein ligase DTX3L-like isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
133346042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrj04121
]
133346042
Enzymes [BR:
lrj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133346042
Ubiquitin system [BR:
lrj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133346042
BRITE hierarchy
Motif
Pfam:
DTC
zf-C3HC4_2
zf-RING_2
DTX3L_KH-like
zf-RING_UBOX
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-rbx1
zf-RING_10
zf-RING_6
zf-Nse
zf-C3HC4_4
zf-RING_4
zf-RING_11
Prok-RING_4
zf-UDP
Motif
Other DBs
NCBI-GeneID:
133346042
NCBI-ProteinID:
XP_061413299
LinkDB
All DBs
Position
23:complement(13867676..13878960)
Genome browser
AA seq
559 aa
AA seq
DB search
MPTFVVFEIYFLFQKYSRSNLENPGNQAKSTSGHSTLEVDEYIFEYLSKVYYRDLDELNS
KYKCTMKTTKSTDQQKTFLKINGYRNDQPIAEAVEHIVDLYQNVATNVHEFKTLIPDEAI
AMDPVVFKKLLEKTEQYFPNVMISKLPPHIIFTGNYKEVDEARDELFKDLQSKTKSSTSN
EDKLLFSNIQDSRHSNTGVLQASKINLEFVMEIFQDELEQLKKKYQFDIIVKNTPKNNTV
DIMLHPNDKNFFLFNEAMEAFTDFFQSKNNIRHGIVKITEDVSAGQLDYAISTAKKTYPK
IFFQRNESLTEVTIVGNVAKVAGNVDQVEKARDLLCETLNGVSHGSSSTRNKPNVHATMN
SSTIPTAKSKQENNEEKCPICMDDFTNKTSLKRCKHSFCKECIDQAMKSKSVCPICQTVY
GKLEGDQPKDASMKVTTYYTTHLPGYEKHGTITIYYDVPNGRQGPEHPHPGKLYQGTTRY
AYLPDSPEGRHVLSLLRRAFEQRLIFTIGTSSTTGLQDCVTWNDIHHKTSTHGGPDSYGY
PDRDYLKRVQEELKAKGIF
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgccaacttttgttgtttttgaaatttattttctttttcagaaatattcacgaagtaat
ctggaaaatccaggcaaccaagccaagtcaacatcaggtcatagcacactggaagtcgat
gaatatatatttgaatacctttctaaagtttattatagagatcttgatgagctgaatagc
aagtacaaatgcacgatgaagacaacaaagagtactgatcaacaaaaaacatttcttaag
attaacgggtatagaaatgatcaaccaatagctgaagcagtggagcacattgttgatttg
taccaaaatgtagctacaaatgtccatgagtttaaaacactgattccagatgaagctatt
gcaatggatccagttgtgttcaagaaattactagaaaaaaccgaacagtattttccaaat
gttatgataagtaaattaccacctcatattatttttacaggcaactacaaagaagttgat
gaggctcgagatgaactgtttaaagatttgcaaagtaaaacaaaaagtagcacgagcaat
gaagacaaattattattttcgaacattcaagactcaagacactcaaacactggagtttta
caagcttcaaaaattaaccttgaatttgttatggaaatatttcaagatgaattagagcag
ctgaaaaagaaatatcaatttgatataattgtcaaaaatacacctaaaaataatacagtg
gatataatgttgcatcctaatgacaagaatttttttttgtttaatgaagctatggaagct
tttacagatttttttcaaagcaaaaataacattcgacacggcatagttaagatcacggaa
gacgtgtctgcaggacaacttgattatgccatttcgactgcgaaaaaaacatatccaaaa
attttctttcaaaggaatgaaagcctgaccgaagtgactattgtaggaaatgtagcaaag
gttgcaggaaatgtagaccaggttgagaaggcacgggatctgctgtgcgaaacattaaat
ggtgttagtcatggttcctcatcaacaagaaataaacctaatgttcacgcgaccatgaat
tctagcacgattcccactgcaaaatcaaaacaagaaaacaatgaagaaaaatgcccaatc
tgtatggatgatttcacaaataaaacatccctgaaaagatgtaagcactctttctgcaag
gaatgcattgatcaggcaatgaagtcaaagtcagtatgtccaatttgccagacagtttat
ggcaaactagaaggtgatcaaccaaaggatgcctcaatgaaggtaacgacttactacaca
actcatttgccaggatatgagaagcatggaaccattacaatatactatgacgtcccaaat
ggcagacaagggccagagcacccacatcctgggaaactttatcaaggaacaacaaggtat
gcatatttacctgattcgcccgaggggaggcatgtactcagcctcctccggcgggcattt
gaacagaggctcatcttcactattgggacatcgtcaaccaccggtctgcaggactgtgtc
acgtggaatgacatccatcataaaaccagcacacacggaggacctgacagctatggatat
ccagatcgtgattacctcaagcgtgtacaggaggagctgaaagccaagggcattttttga
DBGET
integrated database retrieval system
