KEGG   Lethenteron reissneri (Far Eastern brook lamprey): 133346229
Entry
133346229         CDS       T09663                                 
Symbol
ITGA4
Name
(RefSeq) integrin alpha-4
  KO
K06585  integrin alpha 9
Organism
lrj  Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04510  Focal adhesion
lrj04512  ECM-receptor interaction
lrj04514  Cell adhesion molecules
lrj04810  Regulation of actin cytoskeleton
lrj04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:lrj00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    133346229 (ITGA4)
   04514 Cell adhesion molecules
    133346229 (ITGA4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    133346229 (ITGA4)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    133346229 (ITGA4)
   04810 Regulation of actin cytoskeleton
    133346229 (ITGA4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:lrj04515]
    133346229 (ITGA4)
Cell adhesion molecules [BR:lrj04515]
 Integrins
  Integrin alpha subunits
   133346229 (ITGA4)
SSDB
Motif
Pfam: FG-GAP Integrin_A_Ig_1 Integrin_A_Ig_3 Integrin_A_Ig_2 FG-GAP_3 FG-GAP_2 DUF11
Other DBs
NCBI-GeneID: 133346229
NCBI-ProteinID: XP_061413752
LinkDB
Position
23:7138295..7184104
AA seq 1006 aa
MLRASGLCAFSRLLLLLLAHVTCTALPGALAYNLDVAGAALIRGAKGTFFGFSVLQHAYE
NDTWVLIGAPQAQSGAERSGAVFKCHEDGAGGYSCSELPIDKRTGNVCGTLCRETRADQW
LGVSLAREAGGGDSKVMACAHRRANVNPDDIFPHGICFLIPPDLKPDAVTHTSPCSIGAA
NAHDEMRQHASCQAGMAASSATQNFMVLGGPGSFNWAGTVMLHNVSSGLTHFSTPDTVVT
KDSYLGYSVSAGIFYNRTSLGVVAGAPRQDNVGKVYLLTLVEGELQITWQSSGKQLGSYF
GSATCAVDLDADGLADLLVGAPQHSETRDEGRVHVFMNVGQGNLVERKSLLSGANAYNAH
FGQVIVALGDINDDRFEDVAIGAPHEDDLRGAVYIYNGGPSGMSHSFSQRILGRRVNAEL
SMFGHSISGVIDMDRNGYPDVTVGAFNSDAAVVFRAKAVVTVRARVSLPSTVNASSSVCP
GTHQQVTCIIIRVCFTVTGRNLPSVIGLQYNLTADIRRRELGFQSRMTVGSLNNSSSFVS
RHMAVRLGDNCQESLGIIKREVVDVFQPVVVEVTYGLLAVAAGPSDVHPPPLQPMLRPRA
EGHVAWSQTLLQCHSVNTNCTPDLWVEVVFIHSGSEHPGNNVVAGYTRTLLMHVRVHNRG
DTAHGPSLSVAFPRPLHYIKALVQGDEPHSCAPKASSLVCTLGPQLIEHNSTRKVGIMFD
TSMLTGDEGELPFNITVKSETPEAESTLEDNYKKAVVHVTNAATAIINGTVSPALFYFGK
AAKGDQTSECLQQTVIFSIKVTNMGPSRVRAAWVQLLIPGQVSSNTPKLFSVLETKVGGQ
AADCVIDGSAENCHRPDVKSNPGFFQNLFNIINSKHLKVTCGGMARCVNITCPLGSLHKG
SVRDVDIRTLLDTRVLEMDRAAWVQLDAEASVTLHGVVPDGGPARTTVTADAKYELREAV
DVVTWSVVLSSLAGVLVLSAITFVLWKVGFCKRTIPVGKPRRRNAY
NT seq 3021 nt   +upstreamnt  +downstreamnt
atgctccgtgcctctggcctctgtgccttcagccgtctgctgctgctgcttctggctcac
gtcacctgcacggccttgcccggtgcgctggcgtacaacctggacgtggcaggcgcggca
ctcatccggggagccaagggcactttctttggattctcggtgttgcagcatgcctatgag
aatgacacttgggtgttgattggggctcctcaagcgcagtcaggcgctgaacgctctggg
gccgtgtttaaatgccacgaggacggcgcaggagggtacagctgcagcgaattacccata
gataagcggactggaaatgtgtgtgggaccttatgtcgggagacgcgtgcagaccagtgg
ctgggggtgtcactggcgagggaggctggtggtggcgacagcaaggtcatggcctgtgcc
catcgccgggccaacgtaaacccagacgacatctttcctcacggcatctgttttctcatt
cctcctgacctgaagcccgatgcagtgactcacaccagcccctgcagtatcggtgcagcc
aacgcccacgatgagatgcggcaacacgcctcctgccaggctggaatggctgcctcctcg
gccacacagaacttcatggtgctgggtggtcctggatcctttaactgggcaggcactgtg
atgctgcacaacgtgagctccggattgacgcacttctccacccctgacaccgtcgtcacg
aaggacagttaccttggctattcggtatcagctgggattttttataatcgaacgagcctg
ggtgtcgtagctggagctccgcgtcaagacaacgtgggaaaagtgtacctgctgacatta
gtggagggtgaactgcaaataacatggcaatcctcgggaaagcagctcggctcgtatttc
ggctccgccacatgcgccgtggacctggacgctgacggcctggcggacctgctggttggg
gcgccgcagcacagcgagacgcgcgacgagggcagggtgcatgtgttcatgaacgtcggc
cagggaaatttggtagaacggaagtctcttctctctggagccaatgcatacaacgctcac
tttggacaagtcattgtggccctgggcgatataaatgatgatagatttgaagatgtggca
attggcgctccgcatgaagatgatctgcgtggtgctgtgtatatctacaatggggggccg
tctggaatgtcccactctttctcacagaggatcctgggtcgaagagtgaacgcagaactg
agcatgttcggacattccatatcaggagtcatcgacatggacagaaatggctacccagat
gtgacagttggtgcttttaactctgacgctgctgtggtgttcagagctaaggcggtggtg
acggtgagagcccgcgtgtcgctcccatccaccgttaacgcaagcagctcggtctgtcca
ggcactcatcaacaagtgacttgcatcatcatcagggtgtgcttcacagtcaccggacgg
aacctacccagcgtaataggcttgcagtacaacctcactgctgatatcagaagacgggag
ctggggttccagtcccgaatgacagtgggatcgctcaacaattcttccagctttgtatcc
aggcatatggctgtgcgacttggtgacaattgccaagagagcctagggattatcaagcgg
gaagtcgtcgatgtgttccaaccggtggtggtggaggtgacctatggcctccttgcggtg
gctgccgggcccagtgatgtccacccaccacccctccagcccatgctgcggccaagagca
gagggacacgtggcttggagccagactttgctccagtgccactctgtgaacacaaactgt
acacctgacctctgggtggaggtggtgtttattcattctggctccgagcatcctgggaac
aacgtggtggctggatacacacgcacactgctgatgcacgttcgcgtacacaaccgcgga
gacactgcacacggcccctccctctctgtggctttcccacggccgctgcactacatcaag
gctctcgtacagggcgatgagcctcatagttgtgcacctaaagcttcgtcgctggtgtgc
accttaggaccccagttgattgaacacaactcaacgaggaaagtcggcattatgtttgac
accagcatgcttaccggggatgagggagagttgccgtttaatataactgtgaaaagtgag
actcctgaagcagagtccaccctagaggacaactacaagaaggctgtggtccacgtcacc
aatgcagctacagcgatcatcaatggaacggtgtctccagcgttattttactttggcaaa
gctgccaaaggggaccaaacctcagagtgcttgcaacagacggtcatcttttcaataaag
gtgacgaatatgggtcccagcagagtgcgtgcggcctgggtgcagctcctgatccctggg
caagtgtcgagcaacactcccaagctgttctctgtactggagaccaaggtaggaggccag
gcagccgattgtgtaattgacggttcagctgaaaattgtcaccgcccggatgtgaaaagc
aaccctggattttttcaaaacttgttcaacatcatcaattcaaagcacctgaaagtgaca
tgcggtggcatggccaggtgtgtgaacatcacctgcccgctcggcagcttgcacaagggg
agcgttcgtgatgtggacatcaggaccttgctggacacacgcgtgctggaaatggaccgt
gcggcgtgggtgcagctcgacgcagaggcgagcgtcacgctgcacggagtcgtcccagac
ggcgggcccgcacgcaccacggtcaccgcggacgccaagtacgagctgcgagaagcggtc
gacgttgtgacgtggagcgttgtgctcagctctctggcaggggtgctcgtgctcagcgcc
atcacgttcgttctctggaaggttggcttctgcaaacgaacgattccagtgggaaagcct
cgccggagaaacgcctactga

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