Lethenteron reissneri (Far Eastern brook lamprey): 133346361
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Entry
133346361 CDS
T09663
Symbol
RIC1
Name
(RefSeq) guanine nucleotide exchange factor subunit RIC1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrj04131
]
133346361 (RIC1)
Membrane trafficking [BR:
lrj04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
133346361 (RIC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
Motif
Other DBs
NCBI-GeneID:
133346361
NCBI-ProteinID:
XP_061413840
LinkDB
All DBs
Position
24:complement(466323..521893)
Genome browser
AA seq
1653 aa
AA seq
DB search
MYFAVGKPRRLLFPFASDESPHFVAADRERLLLAALSRSQLSVWFARPSVLVVSRRSSLK
ALAQLGAYERAAWKVDSSCIAVTTGRGYVLLFDVLLVGGEENSLYLAVDHRGSPVRRGVP
GYKDEQRVPALSLELGRVLDIQASISCLISLPDDIIATTTDGKLHHLRWDGLTNGRKALD
LCTVPFAVDLQSAAGAPLPPRPVSVRDMAFCQTLGGFAVVLSDGRAGFITAADSCTDQVL
GVWAPDVADGSCVAANNKYRLLAFGCRSGCVLVYAMDTVAGALQLSHRLELTAKDYPDMC
KRTGAVQNVRWSPDWTVLVLSWERGGLSAWSAFGAPLLCTLAADFGFHPDGSRKEPLKIS
SMSWGPEGYTLWVLTPPPDAGSDVSDGAGSKEDCGYQAELLILHFVKSALALHPCVSNQE
QVLLQGDDRLYLSCGEPPTSRPHTPSPPFLLGHRHWHIVQIHNSYLDNNWPIRHAAMDAQ
GQCVAVSGRAGLAHYSLYTRKWKLFGNITQEQSMAVTGGLVWWEDFIVAACHNLAEGQDE
LRVYPRASNLDNAHAHVQRLPAPPLLLGGSRGRLLLFCSDRQLHVYSVERSPLDVPHPGV
TLRALQRVSLQAHVPHPGLVVSVALTSMRSEKTLSSLRPAQQACAGDSVLLNVAGQLLML
QRDRSGPQPLDVSDDPTSSSTSSSTSSAASLARKNPSFCAPVVLAECVEITWTTGHSAPR
SQPHQPQQQQQQHGPATEVLWLGCGRSGMKVWLPLSPAASDGGWPTGPLHGYNHNLNHGH
HHQEQQHQQQQHHAGSVFQHAFMSRRIMLPFPVPALYPLTVLAEHGLVLGVTTETLPGSS
SAAGGGGGGGGSVADLLPFCVAERASQLYLPAVLRGLLARNLGDAAVWLARGCSSLPYFR
HALESALHAVLEEEAMARSPVPDPLLPALAKFAAAFPGFLRTVAHCARKSEVALWPCLFA
AVGSPKQLFEECLVARDLETAASYLIILQNMEAPALSRQHATLLFNSALDEGRWDLCRNM
IRFLRAIGTGGDDDGGAGGGGAGGGGGGGSGGGGGGAAPVTPPGSESGATSSSGFEFFRH
RSISLSQPPDGALFAAPAGSAAGGAAAREGSASGGSAASGTRGGPLHKALSVPDGHVPKR
AAAARAEASAVLPGAGCSPEDVFLDAMLARHARRLLEGARVRQLGRFAARLSFPLVAWLR
KERHRAARPADPVSALRGLHRDFRRPLPPTPTTTPVVPGASVPTDLRPSRHGTAVKAGHH
AAPSGRTSSDAAAWLANPPSPLFLPADDPAVTHDALLRAAPSPPHGPTFTHEAVLHPLPK
KGDECSLGSATDATESSSLGDAEWGLLDESGAETASDPRLNSGGGGAPPEPTGRAAERAA
TQLRYLLHVFAEAGCPEWCLLLALVLRDAGAVRAAVAAVARAPGMGEPGGGGPGGGGPSD
AAARLAEVVASVERWAAQCCPGYKAFLSQLQPELQALSALADSWGGGGIAAASGGAAGFG
SPAASTAALDACNAARSPYHEGPRASGGRAGNAAAAVPTPTPSRPRDAGAASIAPATIAT
AGGGGGDGVERDATAAASPVSPCSPSPPLLSLSSSSSFAASSPSSSFPPEGAGAEDPAGA
VAGASAETAAEAGTEDDGTAKGGEAEEYACRIA
NT seq
4962 nt
NT seq
+upstream
nt +downstream
nt
atgtacttcgccgtcggcaaaccacggcggcttctcttccccttcgccagcgacgagagt
cctcacttcgtggcggccgaccgcgagcggctgctgctggccgcgttgtcacggtcgcag
ctgtccgtgtggttcgccaggcccagcgtgttggtcgtgagccggcgctcgtccctcaag
gcgctcgctcagctgggcgcgtacgagcgagcggcgtggaaggtggacagcagctgcatc
gccgtgacgacgggacggggctatgtgctgctgttcgacgtgctgctggtgggaggggag
gagaacagcctctacctggctgtcgaccacaggggcagcccggtgcggaggggcgtcccg
ggctacaaggacgagcagcgcgtgccggcgctgtccctggagctcggccgtgtgctcgac
atccaggcctccatctcctgcctcatctcactgcccgatgacatcattgccacgacaacg
gatggcaagctgcaccatctgcgctgggacgggttgaccaatgggaggaaggcgctcgac
ctttgcactgtgccctttgcggtcgacctccagtcggctgccggagcgccgctgccgccg
cgcccagtgagcgtgcgggacatggccttctgccagacgctcggtggctttgcggtggtc
ctctccgacggacgcgccggcttcatcaccgccgccgactcctgcacggaccaggtgctg
ggcgtgtgggcgcccgacgtggcggacgggagctgtgtggccgccaacaacaagtaccgc
ctgctcgccttcggctgccgcagtggctgcgtgctggtctacgccatggacacggtggcc
ggggcgctgcagctgtcccatcggctggagctcacggccaaagactaccccgacatgtgc
aagcggacgggcgccgtgcagaacgtgcgctggagtcccgactggacggtgctcgtgctg
agctgggagcgtggaggcctctcggcgtggagcgccttcggagcgccgctgctgtgcacc
ctcgctgccgacttcggattccatcccgatggaagccggaaagaaccattaaaaatcagc
tctatgagctggggccctgagggttacaccctgtgggtgctcacgccgccccctgacgca
ggaagtgacgtcagcgacggggcaggaagtaaagaggattgtgggtaccaggcggagctg
ctgatcctgcactttgtgaagagtgcgctggccctgcacccgtgtgtgagcaatcaggag
caggtgttgctgcagggcgacgatcggctctacctgagctgtggagagccccccacgtcc
aggcctcacactccaagcccccccttcctactgggacacagacactggcacatagtgcag
atccacaactcttacctggacaacaactggcccattcggcacgccgctatggacgcccag
ggccagtgcgtggccgtgtcgggccgtgccggactcgcccactactcgctctacacccgc
aagtggaagctcttcggcaacatcacccaggagcaaagcatggcggtgacgggcggcctg
gtgtggtgggaggacttcatcgtggccgcctgccacaaccttgccgaggggcaggacgag
ctgcgtgtgtatccgcgcgcctccaacctggacaacgcgcacgcccacgtgcagcggctg
ccggcgccgccgctgctgctgggcggctcccgcgggcgcctcctcctcttctgctccgac
cggcagctccacgtctacagcgtggagcgcagccccctcgacgtgccgcaccccggcgtg
acgctgcgcgccctgcagagggtctccctgcaggcccacgtgccccacccgggcctcgtg
gtgtcggtggccctcaccagcatgcgctctgagaagacgctctcctccctgaggcccgca
cagcaggcgtgtgcgggagacagcgtgctgctgaacgtcgccgggcagctgctcatgctg
cagagagatcgctcggggccgcagcccctggacgtgagcgacgatcccacctcctcatcc
acctcctcatccacctcctcggcagcgtccctcgcacgcaagaacccgtcgttctgcgcg
ccggtggtcctcgccgagtgcgtggagatcacgtggacgaccgggcactccgctcccagg
tcacaaccacatcaaccgcagcagcagcagcagcagcatggcccggccacagaggtgctg
tggttaggctgcggccgctccggcatgaaggtgtggctccccctgtcgccggccgcctcg
gacggcggctggcccaccggcccccttcacggctacaaccacaacctcaaccacggccac
caccaccaggagcagcagcaccagcagcagcagcatcacgcgggcagcgtgttccagcac
gcgttcatgtcgcgccgcatcatgctgccgttccccgtgccggcgctctacccgctcacg
gtgctggccgagcacggcctggtactgggggtcaccaccgagacgctgccggggtcctcg
tcggccgcgggggggggcggcggcggcggcggcagcgtggccgacctgctgccgttctgc
gtggcggagcgagcgtcgcagctctacctcccggccgtgctgcggggactactggcgcgg
aatctcggcgacgcggcggtgtggctggcgcgcggctgctcctcgctgccgtacttccgg
cacgcgctggagtcggcgctgcacgcggtgctcgaggaggaggcgatggcgcgctccccc
gtgccggaccccctgctgccggcgctcgccaaattcgcggcggccttcccgggcttcctg
cgcacggtcgctcactgcgcccgcaagtccgaggtggcgctgtggccctgcctgttcgcc
gccgtgggcagccccaagcagctgttcgaggagtgcctggtggcgcgagacctcgagacc
gccgcttcttacctcatcatcctgcagaacatggaggctccggcgttgagccgccagcac
gcgacgctgctcttcaactcggcgctggacgagggccgctgggacctgtgccgcaacatg
atccgcttcctgcgcgccatcggcaccgggggtgacgacgacggcggcgccggcggcggc
ggcgccgggggaggaggaggggggggcagcggcggcggcggtggcggcgcggcgccggtc
acgccgcccggatccgagtccggcgccacctcctcgtccggcttcgagttcttccgccat
cgcagcatcagcctctcgcagccgcccgacggagcgctgttcgccgcgccggcgggatcg
gccgcgggtggggcagcggccagagagggcagcgccagcgggggcagcgcagcctcgggc
acgcggggcgggccgctgcacaaggccctgagcgtgccggacggccacgtccccaaacgc
gccgccgcggcgcgggcggaggcttcggcggtcttgccgggcgccgggtgctccccggag
gacgtcttcctggacgccatgctggcgcgccacgcccgccgcctgctggagggcgcccgc
gtgcgccagctgggccgcttcgccgcccgcctctccttcccgctcgtggcgtggctccgc
aaggagcgccaccgcgccgcccggcccgccgaccccgtgtcggcgcttcgcggcctccac
cgggacttccggcgccctctgccgccgacgccgacgacgacgccggtcgtgccgggcgcc
agcgtgccgacggacttgaggccgtcacgccacgggaccgccgtgaaggctgggcaccac
gcagcgccatccgggcgaacgtcatccgatgctgccgcctggctcgccaatcccccgtca
cccctcttcctgcctgccgatgaccccgccgtcacccacgatgcactgctccgggccgcc
ccctctccgccgcacggccccacgtttacccacgaggccgtgctgcatcctctccccaag
aaaggggacgagtgcagcctgggctctgccacagacgccacggagagcagctccctggga
gacgccgagtggggcctcctggacgagtcgggagccgagaccgcctccgacccacgcttg
aacagtggcggcggaggggcgccccccgaaccgacgggcagagcggccgagagggcggcc
acgcagctgcggtacctgctgcacgtgtttgccgaggccggctgccccgagtggtgcctg
ctgctggctctggtgctgcgcgacgccggcgccgtgcgggcggcggtggcggcggtggcg
cgggcgcctggaatgggggagccgggaggggggggcccgggcggtggggggccttccgac
gcggcggccagactggcggaggtggtggcaagcgtggagcgatgggcggcgcagtgctgc
cccggctacaaggccttcctctcgcagctgcagcccgagctgcaggctctgtcggcgctc
gccgattcctgggggggcggcggcatcgccgcggcgtccggcggcgcggctggattcggc
tcgccggcggcgtcgacggcggcgttggacgcgtgcaacgccgcacggagcccgtaccac
gagggaccgcgagcgtcgggcggccgcgccggcaatgccgccgccgccgtgcccacaccg
acaccctctcgcccacgcgatgccggtgccgcctcgatcgccccggcgacgatcgccacg
gcgggtggcggcggcggcgacggcgtggaaagggacgccacggccgccgcgtcccccgtc
tcgccgtgctctccctcgccgccgttgttgtcgctgtcgtcttcctcctccttcgccgcc
tcctccccgtcgtcgtcgttccccccggagggtgcgggtgccgaggacccggcgggcgcc
gtcgccggggcgagcgcggagacggcggcggaagccgggacggaggacgacgggacggcg
aagggcggtgaggcggaggagtacgcctgccgcatcgcgtga
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