Lethenteron reissneri (Far Eastern brook lamprey): 133346402
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Entry
133346402 CDS
T09663
Symbol
POLB
Name
(RefSeq) DNA polymerase beta
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
133346402 (POLB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrj03400
]
133346402 (POLB)
Enzymes [BR:
lrj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
133346402 (POLB)
DNA repair and recombination proteins [BR:
lrj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
133346402 (POLB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
133346402 (POLB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
HHH_5
Cdd1
IMS_HHH_1
DUF3701
HHH_3
Motif
Other DBs
NCBI-GeneID:
133346402
NCBI-ProteinID:
XP_061413914
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All DBs
Position
24:1626867..1644947
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AA seq
339 aa
AA seq
DB search
MSKRKAPQETLNEGITDFLFELANYEKNVNRAIHKYNAYRKAAAVIAKYPNKIKSGSEAK
QLEGVGVQIAKKIDEFLSTGKLQKLEKIRLDDTSSSINFLTRITGIGPAVAKKLYDEGIR
TLDDLKNNVERLNHHQRIGLKYFEDFEKRIPRTELMKMQDLVCKDIQALDPDYIASVCGS
FRRGAESSGDMDVLLTYESYTSESKKQPFLLHRVVDHLKSTGFLTETLSRGETKFMGVGR
LPVVDGDDDDEANRPHRRIDIRLIPKDQYFCGVLYFTGSDIFNKNMRTRALEMGFTLNEY
SIRPIGITGVIGEALPVHSEQDIFSYIGWSYREPKDRSE
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcgcaaggcgccgcaggagaccctcaatgagggcattacagatttcctcttt
gagctggcaaactatgagaaaaatgtgaatcgtgccattcacaagtacaacgcctatcga
aaagctgcagccgtcatcgcaaagtatccaaacaagataaaaagtggttctgaggccaag
caacttgaaggtgttggggtgcaaatcgcaaagaagattgatgagttcctgtcaacgggg
aagttacaaaagctggaaaagattcgtcttgatgacacatcgtcttccatcaacttcctg
acacgcatcactggcatcggacctgctgttgccaaaaagctgtatgatgagggaattaga
acactggacgacttgaaaaataacgtcgagagactgaaccaccaccagcgcattggcctg
aaatactttgaggattttgaaaagaggattcccagaactgagctgatgaaaatgcaggat
ctggtgtgcaaagatatacaagctttggatcctgattacattgcttcagtttgtggcagc
ttccgcagaggggcagagtcaagtggtgacatggatgtacttctgacttatgagagttac
acatctgagagcaagaagcagccatttcttttgcatagggtggtggaccacttgaagtcc
actgggttcctcacggagacattatcccgcggtgaaaccaagttcatgggcgtgggaagg
cttcccgtggttgatggtgatgatgatgatgaggcaaaccgacctcaccgccgtattgac
atccgactcattccaaaggaccagtacttctgcggagtgctttattttacaggcagtgat
attttcaacaagaacatgcgaactcgggcactggaaatggggttcaccctcaacgagtac
tccatccggccaatcggcatcaccggagtgatcggtgaagcgttgccggtacacagtgaa
caggacatcttctcttatatcggatggtcatatcgcgagcctaaagaccggagtgaatga
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