Lethenteron reissneri (Far Eastern brook lamprey): 133346624
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Entry
133346624 CDS
T09663
Symbol
TMC3
Name
(RefSeq) transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lrj02000
]
133346624 (TMC3)
03037 Cilium and associated proteins [BR:
lrj03037
]
133346624 (TMC3)
Transporters [BR:
lrj02000
]
Other transporters
Pores ion channels [TC:
1
]
133346624 (TMC3)
Cilium and associated proteins [BR:
lrj03037
]
Other cilia and associated proteins
Stereociliary proteins
133346624 (TMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
TMEM43
Motif
Other DBs
NCBI-GeneID:
133346624
NCBI-ProteinID:
XP_061414318
LinkDB
All DBs
Position
24:13167002..13204362
Genome browser
AA seq
1508 aa
AA seq
DB search
MSEARNARMTRAARRQKTVRKKSVSLRLLAAYEDDHDGRGSDDDGGLGDTQAEWSDQEEI
MQNIQIQKDIIANIRCRPWPMKQKLKVLKQARQIVEKYEGRLTKTRGYQAAGVALFRKFQ
RCLYNFISLFIPWEMRIKKIESHFGSGVASYFIFLRWLFGINIVLTVMTVAFLVLPELLA
GEPFGTTKSKRIPSDQMNTAQDLDTIWSLGGYLQYSVLFYGYYGNDRKLGRSGYRLPLAY
FLVGMAVFAYSFVALLRKMAKNSRQSLSSASDENFTFCWKVFCAWDYLIGNQETAESKVA
AIATTIRESILEEQEKKKSENRTLRVFLRILANILVLLCLAGSIYIIYFVVDRSQKLEQM
KDELTLWEKNEVSVVVSLITMLAPSAFEIIAALEQYHPRTTLRFQLARVLVLYLGNLYSL
IIALLDKVNIMSAMVNGTEKNAQDRTVRLGGDTPQVVIPSHNSTTIAPALTSPSPSSPPV
TTVDLGQLTNSTFDLITAATTAATTTAAATVAAAATAAVNLTSVLVSTFFANLTAITTSS
SSFSSSSSPSWNNTTPGPHDSVLEGPRGGTEATALNFTVAAARVVAAVVDWANRTSSLAL
SSTGNKPVSNTTTEMSYSSKSSENQCWETYVGQEMLKLSIIDMIFTVASVLLIDFFRGLF
VRFCSDCWCWDLESKFPEYGEFKIAENVLHLVYNQGMIWMGAFFSPILPAFNVLKLIGLM
YLRSWAVLTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTIFSIVRYRPSSGCGPFSG
QEKIYDIVSDTIKTEFPSWFNSVVSYVTTPVVILPALLLLFMLIYYLQSIARSLKVTNND
LRMQLQYERTEDKKKVFQMAAARLQEGGERSSPTHEPQSRGSSAPSSPTQEMLFIPSAES
TPDMPRSHGHPAPVTGVAAPRPTGPAGGNGGSAAGAAAAAAAMPASVGGSGGGGGASAGA
RRGDSTPELAARPRGGHEPALARTPAGRRRAVVGFRREDSIAEAAAAVAASVGGGVRPKP
VAPMSRGAHPAKASSSTPEMARCRTSAAHAVESVRPRPPRSHAHAVPHPERPLEARRPQV
VTREPGRRPGAFFRPPPPGMEWLGPGPAGYLMRMPGGMYVSERHGDPYLQETELLLPISR
KAQRILGYYPGEPVQRGVRYASPRTRVVPRLLPPHLEAKCYRSRHGPPPGAVHAASPREK
RRRSTRDFHGAEERPPSRDHHHHHHHHQQQQHQQQQPHYYQQPSQQQQHRHRRRMESMRA
ARFYIGEGNRSRYSDEEEEEYEDEGNPRAGMSRAQTRVFTAETHRAPEGDLLLPDPDDLR
WPSPPPPPASPPHPLPPPPAQPQQQPQQQQQQQGPPQQQQQQQAESGRRSHTSASSRESS
RGQRQGGDARSLPPPTAPAALTAAHPSESDMSNASSSDQQHSGGTDQYLHIHPHPERRSH
AAAHASDAAKRARPRVSGGGGGEEEAERASVKTSSGGRPDKGQRRAGPSVEETAGAGKKA
TDLVCSNV
NT seq
4527 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagcccgcaacgcgcgcatgacccgggccgctcggaggcagaagacggtgagg
aagaagtcggtgagtctgcgtctcctcgcagcttacgaggatgatcacgacggcaggggc
tcggatgatgatggaggactcggggacacacaggcggagtggagtgatcaggaggagatc
atgcagaacatccagatccagaaggacatcattgccaacatccgctgccggccctggcca
atgaagcaaaagcttaaagtgctcaagcaagcccgtcagattgtggagaagtacgagggc
cgcttgaccaagacgcgtggataccaggcggcaggagtggcgctcttccgaaaattccag
cgatgtctctacaacttcatctcgctcttcattccgtgggagatgcgcatcaagaagatc
gagagtcacttcggctcgggagtggcgtcctacttcatcttcctgcgctggctcttcggc
atcaacatcgtcctcaccgtcatgaccgtcgccttcctcgtgctgcccgagctgctggcc
ggagaaccgttcggaaccaccaagagcaagcggatcccctctgaccagatgaacacggca
caggatctcgacaccatctggtcgctgggaggctatctgcaatactcggtgctcttctac
ggctactacggaaacgaccgcaagcttggccgctccgggtaccgcctgcccctcgcctac
ttcctcgtgggcatggcggtgttcgcctacagcttcgtggcgctgctgcgcaagatggcg
aagaactcgaggcagagcctgagcagcgcctcggatgagaacttcacgttctgctggaag
gtcttctgcgcctgggactacctgatcggcaaccaggagacagccgagagcaaagtggcg
gcaatcgccaccaccatccgcgaatcaatcctggaagaacaagaaaagaagaagagtgaa
aacaggaccctgcgggttttcctccgcatcctcgccaacatcctggtgctgctgtgcctc
gcgggcagcatctacatcatctacttcgtggtggatcgctcgcagaagctggagcagatg
aaggacgagctcacgctctgggagaagaacgaggtgagcgtcgtcgtgtccctcatcacc
atgctggctccctccgccttcgagatcatcgcggcgctggagcaataccacccgcgcacc
actctccgcttccagctcgccagggtcttggttctgtacctgggcaatctctacagcctc
atcattgccctcctggacaaggttaacatcatgagtgccatggtgaacggcacagagaag
aacgcgcaggaccgcacggtgcgtctcggcggggacactccccaagtcgtcatcccctcc
cacaactccaccacgatcgccccggcgctgacgtcaccgtcaccatcatcaccacctgtc
acgacagtcgatctgggccaactcacgaattccacctttgacctcatcaccgccgccacg
accgccgccaccactacggcagccgccacggtcgccgccgccgccaccgccgccgtaaac
ctgacgtccgtgctggtgtcgaccttctttgccaacctcacggcaatcacgacctcctcc
tcctccttctcctcctcctcttcaccctcgtggaacaacacgacgcccggaccgcacgat
agcgtcctcgaaggcccccgtggcgggacggaggcgacggcgctgaactttacggtggcg
gcggcgagggtagtggcggcggtggtggattgggccaaccggacgtcctccctggcgctg
agctccaccgggaataagcccgtctcgaacacgaccaccgagatgtcgtactcgtccaag
tcgtcggaaaaccagtgctgggagacctacgttgggcaggagatgctcaagctgtcgatc
atcgacatgatcttcacggtggccagcgtgctgctcatcgacttcttccggggcctcttc
gttcgcttctgcagcgactgttggtgctgggacctcgagagcaagtttcccgagtacgga
gagtttaagatcgccgaaaacgttcttcacctcgtctacaaccagggcatgatctggatg
ggcgctttcttctctcccattctgcccgcgttcaatgtgctcaagctcatcggcctcatg
tacctgcgcagctgggccgtgctcacctgcaacgtgcctcaccagcaggtgttccgcgcc
tcgcgctccaacaacttctacttggccatgctgctcttcatgctcttcctctgcatgctg
cccaccatcttctccatcgtccgataccgcccgtccagtggatgcggccccttcagcggc
caggaaaagatctacgacattgtgtcggacacgatcaaaacggagttcccgtcgtggttc
aactcggtggtgagctacgtgaccacgcccgtcgtgatcctgcccgctctgctgctgctc
ttcatgctgatttactacctgcagtccatcgccaggtccctgaaggtcacgaacaatgac
cttcggatgcagcttcagtacgagcgtacagaggacaaaaagaaagtgtttcaaatggca
gcagcgcggctgcaggagggcggcgagcgctcctctccgacccacgagccccagagccgc
ggctcttccgccccgtcctcgccgacgcaggagatgctcttcatcccctccgcggagtcc
acccctgacatgccgcgctcgcacggccacccggcgcccgtgacgggggtcgcggcgccg
cggcccacgggccccgccggcggaaacggaggatcggcggcgggcgccgcggcggcggcc
gctgcgatgccggcctccgtcgggggtagcggcggcggcggcggcgcatccgcgggcgcc
cgtcgcggagactcgacgcccgagttggcggcgcgcccgcgcggggggcacgagccggcg
cttgcgagaacgccggcgggcaggaggcgggcggtggtggggttccggcgggaggactcg
atagcggaggcggcggccgcggtggcggcgagcgtcggtggcggcgtgaggccgaaaccc
gttgccccgatgtcgcgcggagcgcaccccgcgaaggccagctcctccacccccgagatg
gcgagatgtcggacgagcgcagcgcatgcagtggagagcgtgaggccacggccacccagg
tcccatgcgcacgcggtgccgcacccggagcggccgctcgaggccaggaggccgcaggtg
gtgacgcgagagcccggtcgacgccccggggccttcttcaggccaccacctccgggcatg
gagtggctcggtccgggccccgccggctacttgatgcgcatgccgggcggcatgtacgtg
tccgagcggcacggtgacccctacctgcaggagaccgagctcctgctgcccatcagccgc
aaggcacagaggattctgggatactaccccggcgagccagtgcagaggggagtccggtac
gcctcgcccagaacccgcgtcgtgccgcggctgctgcccccgcacctggaggccaagtgc
taccgctcacgccacggccccccgccgggcgccgtgcacgccgcgtctcctcgtgagaag
cggcgccgctccacccgcgacttccacggcgcggaggagcggcctccgtcccgtgaccac
caccaccatcaccaccaccaccagcagcagcagcaccagcagcagcagccgcattactac
cagcagccatcgcagcagcagcagcacaggcaccgtcgccgcatggaaagcatgcgcgcc
gcacgcttctacatcggcgagggaaaccgctcgcgctactcggacgaagaggaggaggag
tacgaggacgaggggaacccccgagcggggatgtcgcgcgcgcagacgcgggtcttcacg
gcggagacgcaccgcgctcccgagggcgatctcctcctgccggaccccgatgacctccgc
tggccctcgccgccaccgccaccggcatccccgccacatccgctgcctccgccgccagcg
caaccacagcaacagccgcagcagcagcagcagcagcaggggccaccgcagcagcagcag
cagcagcaggcggaatcgggccgcaggtctcacacctcggcatcgagccgcgagtcttca
cgggggcagcgccagggcggggacgcgaggtcgctgccaccgccgacggccccggccgcg
cttaccgccgctcacccgtccgagtcggacatgtccaacgcatcgagcagcgaccagcag
cacagcggcggcacggaccagtacctgcacatccacccgcacccagagcggcggtcgcac
gcggccgcgcatgcctccgacgccgcgaagagggcgcggccgagggtcagcggcggcggc
ggcggggaggaggaggccgagagggcctccgtgaagacgtccagcggcggacgtcccgac
aagggccagaggagggccgggcccagcgtggaggagacggcgggagccgggaagaaggcg
acggacttggtctgctcgaatgtgtga
DBGET
integrated database retrieval system