Lethenteron reissneri (Far Eastern brook lamprey): 133346748
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Entry
133346748 CDS
T09663
Symbol
ITGB4
Name
(RefSeq) LOW QUALITY PROTEIN: integrin beta-4
KO
K06525
integrin beta 4
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04382
Cornified envelope formation
lrj04510
Focal adhesion
lrj04512
ECM-receptor interaction
lrj04810
Regulation of actin cytoskeleton
lrj04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133346748 (ITGB4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133346748 (ITGB4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
133346748 (ITGB4)
04810 Regulation of actin cytoskeleton
133346748 (ITGB4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133346748 (ITGB4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lrj04147
]
133346748 (ITGB4)
04515 Cell adhesion molecules [BR:
lrj04515
]
133346748 (ITGB4)
04090 CD molecules [BR:
lrj04090
]
133346748 (ITGB4)
Exosome [BR:
lrj04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
133346748 (ITGB4)
Exosomal proteins of bladder cancer cells
133346748 (ITGB4)
Cell adhesion molecules [BR:
lrj04515
]
Integrins
Integrin beta subunits
133346748 (ITGB4)
CD molecules [BR:
lrj04090
]
Proteins
133346748 (ITGB4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Integrin_B_tail
EGF_integrin
Pur_ac_phosph_N
PSI_integrin
Ig_DSCAM-DSCAML_C
I-EGF_1
EGF_2
EGF_Teneurin
EGF_TEN
SEA
vWA_SIBA-E
Kelch_4
Motif
Other DBs
NCBI-GeneID:
133346748
NCBI-ProteinID:
XP_061414582
LinkDB
All DBs
Position
3:12699457..12765319
Genome browser
AA seq
1944 aa
AA seq
DB search
MEAAWLLVFLAAFGLSHGQTQGINQCLSNNPLTCRECLKIGPKCSYCFEEGFTEKRCDLL
ENLQAKRCGQITMVRTSSEVMKSLSTSDMMSSRYAQVSPQSMNIKMRPGDSLKFDMQVIE
PLKTPVDLYFLMDDSNSMNDDLDNLKKLGKQLAGVVQELSEDFHIGFGKFVDKVVAPQTD
MRPEKLKQPWEDSDPPFSFKNVIPLTSDVQHFQDKLQGERISGNRDAPEGGFDAMLQVAV
CTKEIGWRNRTTHLLVFSTESAFHYEADGANVLAGILKRNDEQCHLTPDGDYTEGETQDY
PSVPTLVRLLGKNNIIPIFAVTQHAIEWYTSLAKFFPDSTYGELQEDSSNIIQLLQSSFK
ALRSKLQLQAEGLPRYLKAEFLQVAADGTEKDASVVTATPGQIVNYRVKLTADERYNERS
LCDMTPRERSNINFTLKPARFYDGLNINAEILCDCPCEATPVSNPMCSGNGRLTCGHCYC
NDGWLGSNCNCSKLGTSQLVNAASCTRPGDSEPCSKRGDCVCGSCFCWPRPNPLEKYYGQ
YCECDNFQCPRANGIICNGRGDCSCGKCECSAGWTGEACQCPLGVETCRDGRGGICNGRG
TCHCGVCECDKQQFSGSTCEVCLKCLGLCEDTRSCVQCQAWGTGEKKGDECGRCSPQTVM
VDELKGANSVLEVCKFKDEEDGCVYHYTVENSPDDRSEYRIETLKKKECPAAGFLWLIPL
IMFLIPLLGLLAFLCWKCCVGGFACCKGYQKVPIGAWTKGRTVGWTEDQYLFHQNALTAD
YVDTPLARAGPLGGPDIVKWKVTDNVHKPAATIPPPSMQETVYHGITLRLARLMNDNLAQ
PGTPENKTLIKEVEQNLNTVYGNVIGTQTVRNTVLRLQPNAGKRDRNVVVDTVLPAPRSA
LREIMETTEKQVNLGAFSKVPVVPGFYTVATDRDAHGEVEYQEGVDAQDVRVPLFVKEED
DMEKKLLVEATSVPEGLARITRRNVHITIIKDMAKSIVSFVQPAYTIRNAVSKVVVPVDR
NILEESPAQIKYQTHDLSAIARQDYEPTEGVLKFTPTEKDKEISIPILPARSSPSQLYAQ
PRQFEVELFDPKLGARIGRYKRSIITLLDDRDPGLLEFSKTSQVHKQGQAEIHVPVVRTR
GHDGDVRVKWKTLPSLPSRPSAYQNMSGELAMPDGEIQKSITIPYRQPVDPTRDDNFQVV
MYEPSGGVALGQRKETVVTVSAHGQEVIVPDSMQKSHMDMSGPGDVEAEALNGKTIRINW
TPPPGATVNGYKVRYWIDGEDEGDGQLVETKTTEVQLTSLYAYCDYLMCVYAITPRGLGP
ASEVVTCRTLEEVPGEPGRLAFTIVSATTLQLSWGEPPETNGLITGYEASYTPISEDGRS
IGQTKRVEVQGNKRRVMLIENLRPMVPYRYLVRARNSAGWGPPRESTLNIANQSTRPLSI
PIIPDVPIVDAQGPDDYAGFYMYGAMEGGGKALPSTSDDSYSYHTLPSKQGQTGGSSMTT
STTIHQSHHHQTMLGTLELPGMSGGSQHMHTLTRSTHGGSSTLGDAYGWDFTTGTWSQRG
ASSYDELDARELGSVVMETSASQVSTVLHESAVSYHSLQQTSHGAGVSMTGSRNRTQSEE
AQEVLHQLDLALQPSPRSPAILGTPGIPEAPGRLVFSATGPTSLRVNWQKPQSDTQVMGY
RVTYQSLSGGSPRNVEIADPNQVTVTVDQLLPNEAYLFKVMACSDKGWGQEREGVITIES
QVNPASPHIPIPGSPFTLSTPNAPGPLVFTALTPSSLQLKWEKPMKPQGPIQGYVVSCEP
VHPIAGSVGEPRIFTIDDQDETSLVVNDLLENVPYKFKVKTKTSQGYGPEREGIITIESQ
NGFQQDFSGGMDVMMHPASSQQFVSQSSSMQSEVFDFPGDMMQGIMGVTQMVGQTGIITK
KVTTVTKTTKMDSGTVSKQGEMRF
NT seq
5835 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagcgtggctcttggtgttcctggctgcctttggcctgagtcacgggcagacc
caagggataaaccaatgtctctcaaacaaccccctcacctgcagggaatgcctcaagatc
gggcccaagtgctcctactgcttcgaagagggtttcacggagaagcgctgcgacctgctg
gagaaccttcaggccaagcgatgcggccagatcaccatggtgcgcacgtcctccgaagtg
atgaagagtttgtccacttcggacatgatgagctcacgctacgcccaagtgtctccacag
tccatgaacatcaagatgagaccaggggactcgctcaagtttgacatgcaggtaattgag
cccctcaagacgcctgtcgacctctacttcctcatggacgactccaactccatgaacgac
gacttggacaacctcaagaagctgggcaaacagctggctggcgtcgtgcaggagctctcc
gaggatttccacattggcttcggcaagttcgtcgacaaggtggtggcgccgcagacggac
atgcggccggaaaagctgaagcagccgtgggaggacagcgacccccccttctccttcaag
aacgtcatcccgctcacgtccgacgtgcagcacttccaggacaagctgcagggcgagcgg
atctcgggcaaccgcgacgctcccgagggcggcttcgatgccatgctgcaagtggccgtg
tgcacgaaggagatcggctggcgcaaccgcaccacccacctgctggtgttctccacggag
tcggccttccactacgaggccgacggagccaacgtcctcgcggggatcctcaagcgcaac
gacgagcagtgccacctgacccccgacggcgactacacggagggcgagacgcaggactac
ccctccgtgcccacgctcgtgcgcctgctgggcaagaacaacatcatccccatctttgcc
gtcacgcagcacgccatcgagtggtacacgagtctggcgaagttcttcccggactcgacg
tacggagagctccaggaggactcctccaacatcatccagctgctgcagtcctccttcaag
gctctgcgctccaagctgcagctgcaggccgaggggctcccgcgctacctcaaggccgag
ttcctgcaggtggcggccgacggcacggagaaggacgccagcgtggtgaccgcgacgccg
ggccagatcgtgaactaccgcgtgaagctgacggcggacgagcgttataacgagcggtcg
ctgtgcgacatgacacccagggagcgcagcaacatcaacttcacgctgaagccggcgcgc
ttctacgacggcctcaacatcaacgcggagatcctgtgcgactgcccgtgcgaggccacg
ccggtgtcgaaccccatgtgcagtgggaacggacgcttgacctgcggccactgctactgc
aacgatggctggctgggctccaactgcaactgcagcaagctggggacgtcgcagttggtg
aacgcggcgtcgtgcacgcggcccggcgactcggagccctgctcgaagcgcggcgactgc
gtgtgcggcagctgcttctgttggccgcggcccaacccgctggagaagtactacgggcag
tactgcgagtgcgacaacttccagtgcccgcgcgccaacggcatcatctgcaacggtcgc
ggcgactgcagctgcgggaagtgtgagtgcagcgccggctggacaggggaggcgtgtcag
tgtcccctgggtgtggaaacatgccgcgatggccgtgggggaatctgtaacggccgcggg
acgtgtcactgcggcgtgtgcgagtgtgacaagcagcagttcagtggctctacctgcgag
gtctgcctgaagtgcctgggcctgtgcgaggacacgcgctcgtgcgtgcagtgccaggcg
tggggcaccggcgagaagaagggcgacgagtgcggacgatgctccccgcaaaccgtcatg
gtcgacgagctcaagggagccaactcggtgctcgaggtttgcaagttcaaggacgaggag
gacggctgcgtgtaccactacacggtggagaactccccggacgaccgcagcgagtacagg
atcgagacgctcaagaagaaggagtgcccggcggctggcttcctgtggctcatccccctc
atcatgttcctcatcccgctgctcggcctgctcgccttcctgtgctggaagtgctgcgtc
ggcggcttcgcctgctgcaagggataccaaaaggttccgattggagcctggactaaaggt
cgcacggtgggctggacggaggaccagtacctgttccaccagaacgcgctgacggccgac
tacgtggacacgccactggcccgcgccgggcccctgggcggccccgacatcgtcaagtgg
aaggtgacggacaacgtccacaagccggcggccaccatcccgcctcccagcatgcaggag
acagtgtaccatggcatcacccttcgcctggcgcggctcatgaatgataacctggcgcag
ccgggaactccggagaacaagaccctcatcaaggaggtggagcaaaatctgaacacggtg
tacggcaacgtcatcggaacgcaaaccgtccgcaacacggtgctgagattgcagccgaat
gctggcaaaagggacaggaacgtggtggtggacacggtgctcccggcgccgcgctcggcc
ctccgggagatcatggagaccacggagaagcaggtgaacctgggcgccttcagcaaggtg
cccgtcgtgccgggcttctacaccgtggccaccgaccgcgacgcccacggcgaggtggag
taccaggagggcgtggacgcgcaggacgtgcgcgtgccgctcttcgtcaaggaggaggac
gacatggagaagaagctgctggtggaggccacgagcgtccccgaggggctggcgcgcatc
acgcgccgcaacgtgcacatcaccatcatcaaggacatggccaagagtatcgtgagcttc
gtgcagccggcgtacaccatccgaaatgccgtctccaaggtggtggtgcctgtggaccgc
aacatcctggaggagagccccgcccagatcaagtaccagacccacgacctctcagccatc
gcccggcaggactacgagcccacggagggagtcctcaagttcactccgacggagaaggac
aaggagatctccattccgatcctgccggcacgcagctccccgtcccagctctacgcccag
ccgcgccagttcgaggtggagctcttcgaccccaagctgggcgcccgcatcggccgctac
aagcgctccatcatcacgctcctggatgaccgcgaccccggcctgctggagttctccaag
acctcgcaggtgcacaagcagggccaggcagagatccacgtgccggtggtgcgcacgcgc
ggccacgacggcgacgtgcgcgtcaagtggaagacgctgccctcgctgccgtcgcgcccc
tccgcctaccagaacatgtcgggcgagctggcgatgcccgacggcgagatccaaaagagc
atcaccatcccgtaccgccagcccgtcgacccgacgcgcgacgacaacttccaggtggtg
atgtacgagccgtcgggcggcgtggcgctgggccagcgcaaggagaccgtggtcaccgtc
agcgcgcacggacaagaagtcatcgtgccggacagcatgcagaagtcgcacatggacatg
tccggcccgggggacgtggaggccgaggctctgaatgggaaaacgatccgtatcaactgg
acgccaccgcccggagccaccgttaacggatacaaggttcgctactggatcgacggggag
gacgagggcgacgggcagctagtagagaccaagacgacggaggtgcagctcacgagcctc
tacgcgtactgcgactacctgatgtgcgtctacgccatcaccccacgcggcctggggccc
gcgtcggaagtggtgacctgccgcacgcttgaggaagttccgggtgagccgggccgcctg
gccttcaccatcgtgtcggccaccacgctgcagctgagctggggggagccgcccgagacc
aacggcctcatcacgggctacgaggcgtcgtacacgcccatcagcgaggacggacgctcc
atcgggcagaccaagcgcgtggaggtgcagggcaacaagcggcgcgtgatgctcatcgag
aacctgcggcccatggtgccgtaccgctacctggtgcgggcgcgcaacagcgccggctgg
gggccgccacgcgaatccaccttgaacatcgccaaccagtccacgcggcccctctccatc
cccatcatcccggacgtgcccatcgtggacgcccagggccccgacgactacgcgggcttc
tacatgtacggcgccatggagggcggcggcaaggcgctgcccagcacctccgacgactcc
tacagctaccatacgctgccctcgaagcagggccagacaggcggcagttcgatgaccacg
agcacgacgatccaccagagccaccaccaccagaccatgctgggcacgctggagctgccg
ggcatgtcgggcggctcgcagcacatgcacacgctcacgcggagcacgcacggtggctcc
tcaacgctcggcgacgcctacggctgggatttcacgaccggcacttggagccagcgcgga
gcctcaagctacgacgagctggacgcgcgggagctagggagcgtcgtcatggagacttca
gctagccaagtgtccactgtgctgcacgagtcagcggtgtcctaccacagcctgcagcag
acgagccacggggcgggcgtgtcgatgaccggctcgcgcaaccgcacgcagtcggaggag
gcgcaggaggtgctgcaccagctggacttagccctgcagccctctccccgcagccccgcc
attctgggcacgcccggaatccccgaggctcccggccgcctcgtcttctcggccacgggc
cccacgtccctccgcgtcaactggcagaagccgcagagcgacacccaagtgatgggctac
cgcgtgacctaccagtccctctcgggaggctccccgcggaatgtggagatcgccgatccc
aaccaggtgaccgtcacggtggaccagctgctgcccaacgaggcgtacctcttcaaggtg
atggcgtgcagcgacaagggttggggccaggagcgcgagggcgtcatcaccatcgagtcg
caggtcaacccggcgagcccgcacatccccattccaggctcaccattcacgctgagcacg
cccaacgcgccgggcccgctggtgttcacggcgctcaccccgtcctcgctgcagctcaag
tgggagaagccgatgaagccccaggggcccatccagggctacgtggtgtcctgcgagccc
gtccaccccatcgcgggcagcgtgggcgagccacgcatcttcaccatcgacgaccaggat
gagacgagcctggtggtgaatgacctcctggagaacgtgccctacaagttcaaagtgaag
accaagacgagccagggctacgggcccgagagagagggcatcatcaccatcgagtctcag
aacggtttccagcaggacttctccggcgggatggacgtgatgatgcacccggcttcctcc
cagcagtttgtctcccagtccagcagcatgcagagcgaggtgttcgacttccctggggac
atgatgcaaggaatcatgggtgtaacgcagatggtgggtcagacaggcatcatcaccaag
aaggtcaccaccgtcaccaagacaaccaaaatggactcgggcaccgtgtccaagcagggg
gaaatgaggttctag
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integrated database retrieval system
