Lethenteron reissneri (Far Eastern brook lamprey): 133346943
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Entry
133346943 CDS
T09663
Name
(RefSeq) platelet-derived growth factor receptor alpha-like
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04010
MAPK signaling pathway
lrj04020
Calcium signaling pathway
lrj04144
Endocytosis
lrj04510
Focal adhesion
lrj04540
Gap junction
lrj04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133346943
04020 Calcium signaling pathway
133346943
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133346943
09144 Cellular community - eukaryotes
04510 Focal adhesion
133346943
04540 Gap junction
133346943
09142 Cell motility
04810 Regulation of actin cytoskeleton
133346943
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lrj01001
]
133346943
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
lrj04090
]
133346943
Enzymes [BR:
lrj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
133346943
Protein kinases [BR:
lrj01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
133346943
CD molecules [BR:
lrj04090
]
Proteins
133346943
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
C1-set
Adeno_E3_CR1
ADC
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
133346943
NCBI-ProteinID:
XP_061414749
LinkDB
All DBs
Position
25:complement(36379..96643)
Genome browser
AA seq
1306 aa
AA seq
DB search
MMFGLHILLASIILGCCCCALDLPRVSPNASEVTVEVGQRLAVRCEASARVVWVDPQNAA
VSTPPATTATAQTEAIPEFGLFSTWLRIENATLQHNGVYTCQYHHEDMSRYDEADATDGT
EARGATVRVYVQDGRSLFVPSRSEHAQVVIVHAGDVATLPCLVTSPRTAVSLRHDAAPAA
AAPGSGSSSSMPPRLSATTHRNNVAVGESVTRQMQRSAQTPQHQIATNQSAHSSNTPSNA
LQKQPLPIVNPADYIQKLEDKINGKAGVPPSNAMASTGPSSNVTTVHSTESGGVSFAAAV
PSAGTPRAAWYVPGVGLQANLLPGRYRCVARLEGRTQESEEYHVMVLAVSQLHPVVDSPR
AVVRRGDTITLTCTVTGNDIVTFTWRHPRKPVDGDTSHTSVHERRIPGGGMQIVHTLTVP
LADERDTGVYTCTTENSYGQANESTHITVLDKGFVRVRPHIGPDESAMLLSSPLYEVDIF
AFPPPLSVFWTKDGRRLFDKNKHRHRPNDQAQFARHHQEGKQPTEGSGPDHKRRKQTGDS
KTNDNLITSSRTDPSRSDAQKMMDARFGRRLENDRQTAASEQTGGGPFRRDRASEPADKA
APDSQQDDKKGLRSDDHGDSHAHIGFEAVDPRNNHYRGWLGLSRVALSDEGLYSIVVENS
DGNASYSFYLSINVPAAITKLSDNPEQGDNGWSGAHRVVCVARGSPKPRLEWFACSQQHS
CTETIHWTLIYVSNATAPAGLGSGLPADANSSRRANPAAGFDYSNVNPDKEGISVQEWAD
PSKGISSSTITFDPATLVTPTAVRCVATNPFQTDEQILSLLNTDSKVGLTVLSVVLFLLV
LSIALLVVAIVICNRKPRYEVRWKVIESVSPDGCEYTYVDPMQLLYDRRWEVPRSTLKFG
RVLGCGAFGKVVEASIQGTETPCVAVKMLKANSSMSERRALMSELKIMSHLGAHLNIVNL
LGACTVGGPVYIITEFCCHGDLVNFLHRNKYAYLHWLKDAQQSLKRPAASSTCAESMYMD
MRPGDDDNYVRSEARVDRVLYTVVDGVYYMDTQRDDEPFYACCELDGASPLTSTDLLSCA
YQVAQGMAFLASKNCVHRDLAARNVLLANHRVVKICDFGLARDLEKDTNYISRGNTFLPV
KWMAPESIFDNVYTTLSDVWSYGVLLWEIFSLGGSPYPGMAIDAHFYGQLKAGLHMDKPE
HATEDLFEIMKACWALRASQRPTFSQLVKTVGKLLPPTYLQAYDQTSEQFCDRRNKIHNS
VHTNVRVDVSSTADPEDKTESDREGGLFYLQLKTEDVQPEWETSFL
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atgatgttcggcctacatatattgctggcctccattattctgggctgctgctgctgtgct
ctggatcttccacgcgtgagccccaacgcgagcgaggtgactgtggaggtcgggcagagg
ctggccgtgaggtgtgaggcctcggcccgcgtggtttgggtcgatcctcaaaacgccgcc
gtctcaacgccgcccgcaaccacagccacggcgcagacggaagccatacctgaattcggc
ttgttttcaacttggctacgaattgagaatgcgacgctgcaacacaatggtgtgtacacg
tgtcagtaccatcacgaagacatgagtagatacgacgaagctgacgccactgatgggaca
gaggcacgaggtgccactgtgagagtttatgtgcaagacgggcgctcgctgttcgtgccc
tcgcggagtgagcacgcgcaggtggtgatcgtgcacgcgggggacgtggcgactctcccg
tgcctcgtcacctcgccacgcacggcggtgtcgctccgtcacgacgccgccccagcagcc
gccgcgcctggcagcggcagcagcagcagcatgccgcctcgactgtccgcaaccacgcac
agaaacaacgtcgcagtgggagaaagtgtcacccgccagatgcaacgtagcgcccaaacg
ccgcaacaccaaattgccacaaaccaaagtgcgcactcctcaaacacccccagcaatgca
cttcaaaagcagccgctccccatcgtgaaccctgctgattacatccaaaagctcgaagac
aaaattaatggcaaagccggagtgcctccttccaatgctatggcgagcacagggccgtct
tcgaatgtcacaaccgtccactccaccgaatccggcggagtgtcgttcgctgccgcggtg
ccgagtgcgggaaccccccgggcagcgtggtacgtgcccggcgtgggcctgcaggcgaac
ctgctgcccgggcgctaccgctgcgtcgcacgtctggagggacgcacgcaggagtcggaa
gagtaccacgtgatggtgctcgcagtctcacagctccatcccgtggtggactcgccacgt
gccgtggtgcggcgtggcgacacgatcacgctcacgtgcaccgtgacgggcaacgacatc
gtcacgttcacctggagacaccctcgcaagccggttgatggggacacgtcgcacacgagc
gtgcacgagcggcgcattcctggcggcggcatgcagatcgtgcacacgctgaccgtgccg
ctggccgacgagcgcgacaccggcgtgtacacgtgcacgaccgagaattcgtacggacag
gcgaacgagagcactcacatcaccgtgttggacaaggggtttgtccgcgtgcggcctcac
atcggccccgacgagtctgcaatgctcctgagttcgcccctctacgaggtggacatcttc
gcatttccacctcctctctctgtcttctggacaaaagacggcagacgcttgtttgacaag
aacaaacaccgccatcgcccaaacgatcaggctcagttcgctcgtcaccaccaggaagga
aagcaaccgaccgaaggtagcggaccggaccacaagcgccgcaagcagacgggtgacagc
aagacgaacgataacctcataacgagcagtcggaccgaccccagccggagcgatgctcag
aaaatgatggacgctcgattcgggaggcgcttggagaacgacaggcagactgctgcgagt
gagcagactggcggaggtccgttccgtcgcgatcgagcaagtgagcctgcggacaaagct
gcgcctgacagccaacaagacgacaagaaggggttgcgctccgacgatcatggagacagc
cacgcacacattggctttgaagctgtagatccacggaataaccattaccgcggctggctg
ggcctcagccgcgtggcgctaagcgatgaaggcctctactcgatcgtggtggagaacagc
gatggcaatgccagctacagcttctacctgtccatcaatgtgccagcagccatcacgaag
ctgtcggacaacccggagcagggcgacaatggctggagcggggcgcaccgcgtggtgtgc
gtggcgcgtggctctcccaaaccacgcctcgagtggttcgcctgcagccagcagcacagt
tgcacagaaacaattcattggaccttgatctacgtcagcaatgccacagctcctgcaggg
ctaggctcaggcctgccagctgacgctaattcaagccgcagagccaatccagctgctggc
ttcgactacagcaacgtgaacccagacaaagagggtatatctgtgcaggagtgggccgat
cccagcaaggggatcagcagcagcacaatcaccttcgatcccgcgacattggtgacccca
accgctgtgcgctgcgtggccacaaaccccttccaaactgatgagcagatcctgtcccta
ctgaacacggactccaaggtggggctcacagtgctgtcggtggtgctgttcctcctcgtc
ctttccattgcccttctcgtcgttgccatcgtcatttgtaataggaaaccacgttacgag
gtgcggtggaaagtgatcgagtcggtgagcccagacgggtgcgagtacacgtacgtggac
ccgatgcaactcctgtatgaccgacgctgggaagttccccgaagcactctgaaatttggt
cgggtcctgggttgtggcgcatttggtaaagtggttgaggcaagcatacagggcacggaa
actccgtgcgtggctgtcaaaatgcttaaagccaactcgtccatgagtgaaaggagagcg
ctgatgtctgagctgaagatcatgagccacctgggcgcacatctcaacatcgtcaacctg
ttgggggcctgcactgtgggaggtcctgtctacataattaccgagttctgttgccacggt
gatctggtgaacttcctgcacaggaacaagtatgcgtaccttcactggctaaaggatgct
cagcaatcgctcaagaggcctgcagcaagctctacatgtgctgagagcatgtatatggat
atgaggccgggagatgatgacaattacgtgcgttctgaagcacgtgtagatcgcgttcta
tacacagtggtggatggggtctattatatggatacccaaagagatgacgaaccattctat
gcctgctgtgaacttgatggcgcgtcgcccctcacgtcgacagacctcctgagctgtgcc
taccaggtggcacagggcatggcgttccttgcctccaaaaattgcgtacacagagacctg
gctgcccgtaacgtgctgctcgcaaaccaccgagtggtcaaaatttgtgactttggactg
gcgagagatctggagaaagacaccaattacatatccaggggcaatacgttcctgccggtg
aagtggatggccccagagagtatatttgacaacgtgtacacaacactcagcgacgtgtgg
tcctacggtgtgctgttgtgggaaatattctcgctcggaggcagtccttaccctggaatg
gcaattgatgcacacttttatgggcagctgaaagctggacttcatatggacaaaccagaa
catgcgacggaagacctgtttgaaataatgaaggcttgctgggcactcagggcatcccaa
agacccacattctcccagctcgtgaaaacagtgggaaagcttctaccaccgacatactta
caggcatacgatcaaacgagcgagcagttttgtgatagacgcaacaagatacacaacagt
gtgcacacaaatgtgcgcgtggatgtgagcagcacggcagatccagaggacaaaactgag
tcagacagggaaggtggcttgttctaccttcaactcaaaacggaagatgtacagcccgag
tgggaaaccagtttcttgtga
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