Lethenteron reissneri (Far Eastern brook lamprey): 133346961
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Entry
133346961 CDS
T09663
Name
(RefSeq) spastin-like isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrj04131
]
133346961
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lrj04812
]
133346961
Enzymes [BR:
lrj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
133346961
Membrane trafficking [BR:
lrj04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
133346961
Cytoskeleton proteins [BR:
lrj04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
133346961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_22
TIP49
AAA_5
Vps4_C
AAA_14
MIT
Mg_chelatase
IstB_IS21
NPHP3_N
DUF815
AAA_16
AAA_2
nSTAND3
AAA_24
Motif
Other DBs
NCBI-GeneID:
133346961
NCBI-ProteinID:
XP_061414791
LinkDB
All DBs
Position
25:542236..573640
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AA seq
671 aa
AA seq
DB search
MHPSAAGKGNKKRKGPHRPSRTGATGATGGSTGSSGGGGGGSVGSGSKPDRVSLHKRNLH
NFSYPLLAVFGVLRFLAFHLWLLIAYVCERLSDLHARRAEPQPEGQAEQGQAEEGQAHDG
QREQRQQGQGPEDATQRLHAHHKNAFECISAALKIDEEDKGRKEEAVEWYRRGISQLEQG
IRISIEGEGEQIDRARRLQAKMKTNLVMAKDRLELLEVGSLPRRRDPLTHKSQSLPRWGP
GNSSSPRTHAHHHHCVQPTGSNHQRHRSAGGGLNLTGLPRPVGSSFPLSLPSGATSSAAA
AAAAAAAATVNPLPRQGSPPSPASGLYRQLSQPALSATTKAAGVKGSSRPSSRGSTPLSS
PSRKMELKNLRNVDSKLASLILNEIVDSVLSVQWDDIAGQELAKQALQEIVILPSLRPEL
FTGLRAPAKGLLLFGPPGNGKTMLAKAVASESSATFFNISAASLTSKYVGEGEKLVRALF
SVARELQPSIIFIDEVDSVLCERREGEHEASRRLKTEFLVEFDGVQSSGEDRVLVMGATN
RPQELDEAVLRRFSKRIYVSLPEEETRLKLLTRLLGKHGNPLSHADRAHLARITEGYSGS
DLTALAKDAALGPIRELDPEQVKNMSANEVRNIRTSDFEDSLKKIKRSVNIVTLEGYMKW
NSDYGDTAAVA
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgcatccctcggccgccggcaagggaaacaaaaagaggaaggggccgcaccggccgagc
cgaaccggggccaccggggccaccggggggagcacgggcagcagtggtggaggaggaggt
ggaagcgtcgggagcggctccaagcccgacagggtgtccctgcacaagcgcaacctccac
aacttctcgtacccgctgctcgctgtgttcggagtgctcaggttcctcgccttccatctg
tggctgctcatcgcctacgtgtgcgagcgcctgagcgacctgcacgcacggcgtgccgag
ccgcaacccgaagggcaggcggagcaggggcaggcagaggaagggcaggcccatgatggg
cagagggagcagcgccagcaggggcaggggcccgaagacgccacccagcgcctgcatgcc
caccacaaaaacgcgttcgagtgcatctcggctgcgctcaagattgacgaggaagacaaa
ggccgtaaggaggaggcagtggagtggtataggagaggcatctcccagctggagcaggga
atccgcatctccatcgagggggaaggagagcagatagacagagcgcggcgtttgcaggcg
aaaatgaaaacgaacctggtgatggcaaaagaccgcctggaacttctcgaggtgggaagc
ctgcccagacgcagggatccgctcacccacaagagccagtccctgccacgctggggcccc
gggaattctagcagtcctcggacccacgcgcatcatcaccactgcgtccagcctaccggc
agcaaccaccagcgccacaggagcgccggagggggtctcaacctgaccggcctaccgcgg
cctgttgggtcctctttcccactctcccttccctccggggctacctcatcggcagcagcg
gcggcagcagcagcagcagcggcgacagtgaatccactgcccaggcagggctcgccaccc
agccccgcatctgggctgtaccgccaactgagccagccagccctttcagccaccaccaag
gctgctggggtgaagggttcgtctcggcccagcagccggggcagcacgccactctcttcc
ccctcgcgcaaaatggaactcaagaacctgcgcaacgtggacagcaaactggccagcctc
atcctcaatgagatcgtggacagtgtcctctcggtgcagtgggacgacatcgcggggcag
gagctggccaagcaggctctgcaagagatcgtcatcctgccctcgctacggccagagctc
ttcacagggctccgcgcaccggccaaaggcctcctgctctttggcccgccaggaaacggc
aagacgatgctggcaaaagctgtggccagcgagtcgagcgccaccttcttcaatataagc
gcggccagtctcacctccaaatatgtgggagagggcgagaagctggtgcgagccttgttt
tctgtggcgagggagctgcagccttcgatcatattcatagatgaggtggacagtgtactg
tgtgagcggcgggagggcgagcatgaggcgagccggcgtctcaagacggagttccttgtg
gagtttgatggggtgcagtcttctggggaagaccgcgtgctggtcatgggagctacaaac
cggccccaagagctggatgaggctgtgctccgccgcttctccaagaggatctacgtctcc
ttgcccgaggaggagacgcgcctcaagctgctcacgcgcctgctggggaagcacggcaac
ccgctcagccacgcggaccgggcacacctggctcgcatcacagaaggatactctgggagt
gacctcacagcgcttgctaaagacgcagccttgggccccattcgtgaactggacccagag
caggtgaaaaacatgtcagcaaatgaggtgagaaacatccgaacatcagactttgaagac
tcgcttaagaagatcaagcgcagtgtgaacatagtcactctggaaggctacatgaagtgg
aacagcgattacggagacacggccgctgtggcctga
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