Lethenteron reissneri (Far Eastern brook lamprey): 133347048
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Entry
133347048 CDS
T09663
Symbol
SPTBN1
Name
(RefSeq) LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04517
IgSF CAM signaling
lrj04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
133347048 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133347048 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lrj04812
]
133347048 (SPTBN1)
Cytoskeleton proteins [BR:
lrj04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
133347048 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
133347048 (SPTBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
MG280
DUF2935
Motif
Other DBs
NCBI-GeneID:
133347048
NCBI-ProteinID:
XP_061414926
LinkDB
All DBs
Position
25:3951320..4005379
Genome browser
AA seq
2360 aa
AA seq
DB search
MTAVSKDLEGSMDIQQQYESINNRWEASEEDWDNENSSARLFERSRIKALADEREAVQKK
TFTKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGEKLPKPTRGKMRIHCLENVDK
ALQFLKEQKVHLENMGSHDIVDGNHRLILGLIWTIILRFQIQDISVETEDNKERRSAKDA
LLLWCQMKTAGYQNVNIHNFTTSWRDGLAFNAIVHKHRPDLIEFDKLKKSNAHHNLQNAF
NIAEQKLGLTKLLDPEDISVDQPDEKSIITYVVTYYHYFSKMKALAVKGKRIGKVLESAI
ETDQMIDKYETLASELLEWIEQTIIILNNRKFANSLTGVQQQLQAFSTYRTVEKPNKFTE
KGNLEVLLFTIQSKMRANNQKVYTPREGKLVNEINKAWERLEKAEHERELALRNELIRQE
KLEQLARRFDRKAALRETWLSENQRLVTQDNFGVDLPAVEAATKKHEAIEADIAAYEERV
QAVVDVARELEAEDYHEVRRVCSRRDNVLRLWEYLQELLAARRHRLEANLALQRVFQEML
HIVDWMDEMKVRLLSQDYGKHLLGVEDLLQKHALVEADITVQADRVKAVNAAAQRFSSED
DAYKPCDPHVVSERATHLEERYAELCSLAAERRSKLEESRKLWRFFWEMAELEGWVREKE
PLLSSGDVGKDLTGVLRLLGQHRAVEDELNGRSADLKQTVREGEEMADAGHFGADDIRAR
VAEMHVLWASLEDLAAQRKRRLQVAESLYQFQADADDIEVWMEDTLRIVSSDDMGHDEFS
TQSLNKKHKDVTEEISSYRPVLDALHEQAQGLPDEVTVNAGVPDRLEALEQRYRELVELS
RVRKQRLQDALALYKMYSEAEACELWIDEKSQWLNAMDVPEKLEDLEVIQHRFEGFEPEM
NSQASRIAVVNQLARQLMHAGHPSEQDIKAKQDHLNSVWSDFRELVDQKKEALSSALSIQ
NFHLECNETKAWIREKTKVIESTQELGNDLAGVMALQRKLSGMERDLAAIQTKLADLQGE
AERLASMHPEQQDAILGRLAEINQVWDNLKETLQNREESLGEASKLQQFLRDLDDFQTWL
SKAQTAIASEDMPNTLPEAEKLLAQHEAIKNEIDNYQDDYQRMRDMGEVVTRDQSDPQYM
FLHQRLQALDTGWNELNKMWENRHSLLSQSHGFQAFLKDARQADGFLSNQEYVLGHVEMP
ATLESAEEAIKNHEDVMTTMDTNDEKIVGALETGRRLLTEDNTYADKIQEKVDSIDERHK
KNRMTAEDVLARLKDNRDLQRFLQDCQELTLWINEKMLTAQDMSYDEARNLHTKWQKHQA
FMAELASNKEWLEKIDEEGQQLMVEKPETEPMVKEKLSELHELWDELENTTQLKAQRLFD
ANRAELFTQSCADLDKWVNQIESQISSDDHGNDLTSVNILIKKQQMLENQMEVRKKEVEE
LQSQATVLCQEGKGRDEVDSQRLTVENRFEQVLAPLQQRRDKLLASKEVHQYIRDLEDEI
LWVEERMPLAASRDHGNNLQTVQLLIKKNQNLQKEIQGHEPRIEDIRERGEDLIARGSVD
PEAIHERLEDLRALWATMIVEAKDRHIRLEESLKAQQYYFDVAEAEAWMSEQELYMIADE
KAKDEQSAVAMLKKHQILEQSVENYSDVIHQLSETSRNLVTSRHPESERIGLRQSQADKL
YAGLKDLAEERRGRLEERHKLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLSER
FAEFARDTATIGQERVDSVNRIADALIEAGHSDSASVADWKDGLNEAWADLLELIDTRTQ
MLAASYELHRFNHDAREVLSRINEKQMQLPEELGRDQNTVESLQRKHTTFENDIQALGVQ
VKVLQEDAERLRGSYAGEKVEDIERREEEVVAAWKGLLDACEARKLRLADTGEKFRFFSL
VRDLMLWMENTIRQINAQEKPRDVSSVELLMNNHQGIKAEIDTRNDNFTTVIELGKSLLA
RQHYATDEIKEKLGQLTDKRKEMISKWEDRAHWLKLILEVHQFARDAGVAEAWLLAQEPH
ITTQEVGESVDEVEQLLKRHEAFEKSVSTWDERFNVLEKHTTLELLELRKQQKEEEERQQ
QQQELQAQLEAKKLEDQIRAEQQRIRTQEVTQNGISSDQESPKQGSKMLDPSVNGNGDNE
ADGARKLTPEPSPSSDPRKPHTLHSQSVSTLPGKAEEGSAFRKEGFLLRKHEWESHNKKA
SSRSWHTLYCVLHNQEFGFYKDSKNMNTGNTYHNEIPVNLANAVCDVATDYKKKKHVLRL
KLPDGNEYLLQAKDDEEMANWIHSIKAAASSRDSSSPSSQDSQAPMRSKTMPSGPPSEAT
SPEKKEKDREKRFSFLKMKK
NT seq
7083 nt
NT seq
+upstream
nt +downstream
nt
atgactgcggtaagcaaagacctggagggcagcatggacatacagcagcagtacgagagc
atcaacaaccgatgggaggcaagcgaggaggactgggacaatgagaacagctcggcaagg
ctctttgagcgctcccgaatcaaggctcttgctgatgagcgtgaggccgtacagaagaag
accttcaccaagtgggtgaactctcacctggcgcgcgtgtcctgccgcatcaccgacctc
tacacggacctgcgcgatggccgcatgctcatcaagctccttgaggtcctatctggggag
aagctgcccaagccgacgcgtggcaagatgcgcatccactgcctcgagaatgtggacaag
gcgctgcagttcctcaaggagcagaaggtgcacctggagaacatgggctcgcacgacatc
gtggatggaaaccaccgtctcatcctgggcctcatctggaccatcatcctgcgtttccag
attcaagacatcagcgtggaaaccgaagacaataaggagagaagatccgctaaggacgcc
ttactcctgtggtgtcagatgaaaacagctggataccagaatgtcaacatacacaacttc
acgaccagctggcgagacggtctggccttcaatgccatcgtccacaaacacaggcctgat
ctgattgagtttgacaaactgaagaagtccaatgctcatcacaatctgcaaaatgctttc
aacatcgctgagcagaaactcggactcactaagcttcttgatcctgaagacatcagtgtg
gaccaacctgatgagaagtccatcatcacctacgtagtcacgtactaccattatttctcc
aagatgaaggccttggctgttaagggcaagcgcattggaaaggtgctggaaagcgccatt
gaaacagaccagatgattgataaatatgagacgctggcatcggaacttctggagtggatt
gagcagaccatcatcattctcaacaaccgcaaatttgccaactctctgaccggggtgcag
cagcagctgcaagccttcagcacctaccgcaccgtggagaagccaaataaattcacagag
aaagggaacctggaggtacttctcttcaccatccagagcaagatgagagcaaacaatcag
aaggtgtacactccccgggagggcaagctcgtcaacgagatcaacaaggcctgggagcgc
ctggagaaggcggagcacgaacgggagctggctctgcggaacgagctcatccgacaggag
aagctggagcagctggctcgacgctttgaccgcaaagcggctcttcgcgagacctggctc
agcgagaaccagcgcctcgtcacacaggacaactttggcgtggacctgccggccgtggag
gcggccaccaagaagcacgaggcgatcgaggccgacatcgcggcctacgaggagcgcgtg
caggccgtggtggacgtggcacgcgagctggaggccgaggactaccacgaggtgcgccgc
gtgtgttcgcggcgcgacaacgtgctgcgcctatgggagtacctgcaggagctgctggcg
gcacgacgccaccgcctcgaggccaacctcgctctgcagcgcgtcttccaggagatgctg
cacatcgtcgactggatggacgaaatgaaggtgcggctgctttcacaagactacggcaaa
cacctgctgggcgtggaggacctgctgcaaaagcatgcactggtggaggccgacatcacc
gtgcaggctgaccgagtcaaggccgtcaatgcagcggcacaaaggttttccagcgaagac
gatgcatacaagccgtgcgacccccacgtcgtcagcgagcgggctacacacctggaggag
cgctatgcagagctgtgctcgctggccgccgagcggcgctccaagctggaggagtctcgc
aagctgtggcgcttcttctgggagatggccgagctggagggctgggtgcgcgagaaggag
ccgctgctgtcgtcgggcgacgtcggcaaggacctgacgggcgtgctgcgcctgctgggg
cagcaccgcgccgtcgaggatgagctcaacggccgctcggccgatctcaagcagacggtg
cgcgaaggcgaggagatggccgacgcgggacacttcggcgccgacgacatccgcgcgcgc
gtcgccgagatgcacgtgctgtgggccagcctggaggacctggcggcgcagcgcaagcgg
cgactgcaggtggccgagagcctgtaccagttccaggcagacgccgatgacatagaggtg
tggatggaggacacgctgcgcatcgtctccagcgacgacatgggccacgacgagttctct
actcagtcgctcaacaagaagcacaaggacgtcaccgaggagatctccagctacaggcct
gtgttggatgcgctgcacgagcaggcgcaggggctcccagatgaggtgacggtcaacgcc
ggcgtgccggaccgcctggaggctctggagcagcgctaccgcgagctcgtggagctgtcg
cgcgtgcgcaagcagcggctgcaggatgccctggcactctacaagatgtacagcgaggcg
gaggcctgcgagctgtggattgacgagaagagccagtggctcaatgccatggatgtgccc
gaaaagctggaggacctggaggttattcagcacaggtttgaaggttttgaaccagagatg
aacagccaggcttctcggatagcagtcgtaaaccaactggctcggcagctcatgcatgca
ggacacccaagcgaacaagacatcaaggctaagcaagatcatctcaactctgtgtggagc
gacttccgagagcttgtggaccaaaagaaagaagcactgagctctgccctgagcatccag
aacttccacctggagtgcaacgaaactaaagcgtggatccgcgagaagactaaagtcatc
gagtccacacaggagctgggcaacgacctcgctggcgtcatggccttgcagcgcaagctg
tctggcatggagcgagacctcgctgcaattcagacaaaattggccgacttgcaaggcgag
gcggagcgtttggcctcaatgcaccccgagcagcaagatgccatcttgggccgccttgcg
gagattaaccaggtgtgggacaacctgaaggagacgctgcagaatagagaggagtcgctg
ggagaagccagcaagctgcagcagttcttgcgtgacctcgatgatttccagacctggctg
tctaaagctcagacggcgattgcatcggaggatatgcccaacacgctcccggaagcggag
aagctgctggcgcagcacgaagctatcaagaacgagatcgacaactaccaagacgactac
cagcgcatgcgcgatatgggcgaagtggtgacacgcgatcagagtgacccgcagtacatg
tttctgcaccagcgcctgcaggcgctcgacacgggctggaatgagctcaacaagatgtgg
gagaacaggcatagcctactgtcccagtcacatggcttccaggccttcctgaaggatgcc
cgccaggcagacggcttccttagcaatcaggagtacgttctgggccatgttgagatgccg
gccaccttggagagtgccgaggaggccatcaagaaccacgaggacgtcatgacgaccatg
gacacgaacgatgaaaaaattgtcggcgcgctggagaccggcaggaggctgctcaccgag
gacaacacatacgcagacaagatccaggagaaggtggactccatcgatgaaaggcataag
aagaaccgtatgacagctgaagatgttcttgctcgactcaaggacaaccgagatctccag
aggttcttgcaggattgccaagagctcaccttgtggatcaatgagaagatgctgacagcc
caggacatgtcgtacgatgaggcacggaacctgcacaccaagtggcagaagcaccaggcc
ttcatggccgagctggcgtccaacaaggagtggctggagaagattgatgaggaagggcag
cagctaatggtggagaagccggagactgagccgatggtgaaagaaaagttgtcagagctg
cacgagctgtgggatgagctggagaacaccacacagctcaaggcccagaggctctttgac
gcaaaccgtgcagagctgttcacgcaaagctgtgctgacctggacaagtgggtcaatcag
attgagtcgcagatcagctctgacgaccacggcaatgacctcaccagcgttaacatcctg
atcaagaaacaacagatgctggagaatcagatggaggtgcggaagaaggaggtggaggag
ttgcagagccaagcgaccgtgctgtgccaggaggggaaaggacgggatgaggtggatagc
caacggctcacggtggaaaaccgctttgagcaagtgctagcgcccttgcagcagcggcgc
gataagctgctggcatccaaggaggtgcatcagtacatccgggacctcgaggatgagatc
ctttgggtggaagagcgcatgccactggctgcatctagagaccacggaaacaatcttcaa
accgtccaactgctcatcaagaaaaaccagaacctgcagaaggagatccagggtcacgag
ccgcgcatcgaggacatacgcgaacgcggggaagatttaattgctcgtggcagcgtcgac
ccggaggccatccatgaaaggcttgaggacctgcgtgcgctgtgggccaccatgatcgtg
gaggccaaggaccgccacatccggcttgaggagtccctcaaggcccagcagtactacttc
gatgtggctgaggcggaggcgtggatgagtgagcaggagctctatatgatcgccgacgag
aaagccaaggacgagcagagtgccgtggccatgctgaagaagcaccagatcttggagcag
tcggtggagaattactcggatgttattcaccagctgtcagaaaccagtcgcaacctcgtc
acttccaggcatccagaaagcgagcgcattgggctgcgacagtcccaggcggacaagctc
tacgctggcctcaaggacttggcagaggagcgacgggggcggctggaggagcggcacaag
ctattccaactcaaccgcgaggtggacgacctggagcagtggattgccgagcgcgaggtg
gtggccggctctcatgagttgggccaggactacgaacacgtcaccatgctgagcgaacgt
tttgcggagtttgcacgcgacacggcgacgatcggccaggagcgtgtggacagcgtgaac
aggatcgcagacgcgctgatcgaggctggccactcggactccgcctcggtggctgactgg
aaggatggcctcaatgaggcatgggccgacctcctggagctcatcgacacacgcactcag
atgctggccgcctcgtatgagctgcatcgcttcaatcacgacgcacgtgaggtgctgtcc
cgtatcaacgagaagcaaatgcagctgcctgaggagctgggccgtgaccagaacacagtg
gagagcctacagcgcaagcacaccaccttcgagaacgacatccaggcactcggcgtgcag
gtgaaggtgctgcaggaggatgcggagagattgagaggaagctacgcaggggagaaagtg
gaggacatcgagcggcgggaggaagaggtggtggccgcctggaaggggctgctggacgcc
tgtgaggctcgcaagctgcggctagccgacactggcgagaagttccgcttcttcagcctc
gtgcgggacttgatgctctggatggaaaacacaatccggcagatcaacgcccaggagaag
ccgagggatgtctcttcagtggagttgctgatgaacaaccaccagggaattaaggcggaa
attgacacccggaatgacaacttcacgaccgtcatcgagcttgggaaatctctactagcc
cgtcaacactacgcaacagacgagataaaagagaaacttggtcagctgactgacaagcgg
aaggaaatgatcagcaagtgggaggacagagcccactggctcaaactgatcctcgaggtg
caccagtttgcgcgcgacgcgggggtggccgaggcttggctgctggcccaggagccacac
atcaccacgcaggaggtcggcgagagcgtggacgaggtggagcagctgctcaagcgccac
gaggcctttgagaagtccgtctccacatgggatgagcgattcaacgtgctcgagaagcac
accaccctggaacttctggagctgcgcaaacaacagaaagaagaggaggagaggcagcag
cagcagcaggaactacaggctcagttagaagccaagaaactcgaagatcagatcagagct
gaacaacaaaggatacgaacgcaagaggtcacacaaaacggcatctcttccgaccaagaa
tcacccaagcagggctccaaaatgctggatccatcggtgaacggcaatggcgacaacgag
gcagacggtgcgaggaagctgaccccggagccatcgccatcgtccgaccctcggaagccc
cacacgctgcattctcagtccgtgtccacattgcctggcaaggccgaggaaggatcagcc
ttccgcaaagaaggcttcctgttgcgtaaacacgagtgggagtcgcataacaagaaggcg
tccagcaggtcttggcacacactgtactgcgtgctgcacaaccaagaatttggattctac
aaggattccaagaacatgaacactggaaacacctaccataatgaaatccccgtcaatttg
gccaacgcggtgtgcgacgttgccacggactacaagaagaagaagcacgtgctcagactt
aagcttcctgatggaaatgaatacctgcttcaggccaaagatgatgaggagatggccaac
tggatacacagcatcaaggcagcagcttcgagccgggactcgagctcgcccagcagccaa
gacagccaggcgcccatgcgctccaagaccatgccgtccggccctcccagcgaagccacc
agccctgagaagaaggagaaggatcgggagaaaaggtttagcttccttaagatgaagaag
tag
DBGET
integrated database retrieval system
