Lethenteron reissneri (Far Eastern brook lamprey): 133347252
Help
Entry
133347252 CDS
T09663
Name
(RefSeq) calpain-1 catalytic subunit-like isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04141
Protein processing in endoplasmic reticulum
lrj04210
Apoptosis
lrj04217
Necroptosis
lrj04218
Cellular senescence
lrj04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133347252
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
133347252
04217 Necroptosis
133347252
04218 Cellular senescence
133347252
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133347252
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lrj01002
]
133347252
Enzymes [BR:
lrj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
133347252
Peptidases and inhibitors [BR:
lrj01002
]
Cysteine peptidases
Family C2: calpain family
133347252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
133347252
NCBI-ProteinID:
XP_061415348
LinkDB
All DBs
Position
25:12680840..12749546
Genome browser
AA seq
726 aa
AA seq
DB search
MPFFYIVDDLPQSPCAPRLEHFVEQQHHRQYRASAIRSRAERLQEPPGRDPRRFAELRAD
CLRSGSLYVDRDFLAGDAVLGPSLCGQRCSWRRPTEICYNPQFIVNGATRTDIKQGALGD
CWLLAAIASLTLHPRLLARVVPEGQSFSDGYAGIFHFQFWQFGEWVDVVIDDLLPTQNNK
LAFLHSTDRNEFWSALLEKAYAKLNGSYEALKGGSIAEAMEDFTGGVFEFYDLKKAPPDL
YRIMRKGLEKASMMGCSIDITSMFDLEARLPNGLVKGHAYSITGLDQIVSGTLCIAHDVF
FEGQDVRLVRIRNPWGEVEWNGAWSDNSWEWRVVDVSERRRLEQVRAEDGEFWMSFSDFK
RNFSKMEICNLSPDTLRTQSDSRHWTVTAHEGRWLRGCTAGGCRNYAGTFWTNPQFHLRL
HEEDDDPDDDEVACSFIVALMQKNMRRQKRDLLTIGYAIYEAPPGCTHLPGEFFVRNSSR
ARSHNFINLREVSDRFRLPPGHYVIVPSTYEPHQEADFLLRVYCEKMNRSRESDDRIGAN
IEEPSMPVELVETDEDRRFTQVFKKLAGEDMEISPRELQDLLNKVTAKHGELKSDGFSLY
ACQSMVALMDSDGSGKLGLPEFKLLWEKIKMWQAIFRKYDEDRSGTMSSYEMRAALNAAG
FHLNNQMYQLITMRYADESMTIKFNDYITCMVRLEAMFRIFHALDKDKRGVIRLGLGLWL
QLTMYA
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgccgttcttctacatcgtggacgacctgccccagtcgccgtgcgcgccccggctggag
cacttcgtggagcagcagcaccaccgccagtaccgcgccagcgccatccgcagccgcgcc
gagcgccttcaggagccccccgggcgcgacccgcggcgattcgcggagctgcgcgccgat
tgcctccgcagcggctccctctacgtggaccgcgacttcctcgcaggggacgcagtgctg
gggccctcgctgtgcggccagcggtgcagttggcgcaggcccacggaaatatgctacaac
ccacagttcattgtgaatggagccacaagaaccgacatcaagcagggggctctgggcgac
tgctggctgctggcagccattgcatccctgaccctgcaccccaggctgttggctcgcgtg
gtgccagaaggacagagcttcagcgacggctacgccggcatcttccacttccagttctgg
cagtttggtgagtgggtggacgtggttattgacgacctgctacccacgcagaacaacaag
ctggctttcctgcactccacagaccgcaacgagttctggagtgcgctgctcgagaaggca
tatgcaaagctcaatggctcatatgaggccctcaagggtggcagcattgccgaagccatg
gaggacttcacgggcggcgtgttcgagttctacgacctgaagaaggcacctccagatctc
taccgcatcatgcgcaagggcttagagaaggcgtctatgatgggctgctcgattgatatc
acaagcatgtttgacctggaggcacgactgcccaatgggctggtgaaaggccacgcctac
tccatcacgggccttgaccagattgtttcaggaacattgtgcattgctcatgatgtgttt
tttgagggacaagatgtaaggttggtgcgaatcaggaatccgtggggagaggtggagtgg
aatggggcctggagcgataactcatgggagtggagggtcgtagatgtttcggagagacgt
cgactggagcaggtccgagcggaggatggagaattctggatgtccttctcggacttcaag
cgtaacttttccaagatggagatctgcaacctgtcgcccgacacgctgcgcacgcagagc
gactcgcgacactggacggtgacggcgcacgagggacgctggctgcgcggctgcaccgcc
gggggctgccgcaactacgcagggacgttctggaccaacccacagttccacttgcgattg
cacgaggaggacgatgacccggatgacgatgaggtggcctgctcgttcatcgtcgccctc
atgcaaaagaacatgcggcgtcagaagcgagacctactcaccatcggctacgccatttac
gaggcgccgcccgggtgcacgcacctgccgggggaattctttgtgcggaactcctcgcgc
gcccgcagccacaacttcatcaacctgcgcgaggtgtcggaccgcttccgcctgccgccc
ggccactacgtcatcgtgccgtccacgtacgagccgcatcaggaggccgacttcctgctc
cgggtctactgcgagaagatgaacagatcgagagagtcggacgacagaattggtgccaac
attgaagagcccagcatgcccgtggagttggtggagacggacgaggaccggaggtttaca
caggtcttcaagaagctggccggcgaggacatggagatcagccccagggaactgcaggac
ctcttaaacaaagttactgccaaacatggcgagctcaagtccgacggattcagcttgtac
gcctgccagagcatggttgccctcatggattctgatggaagcggaaaactcggccttccc
gaatttaaactgctctgggagaaaatcaaaatgtggcaggcaatcttcaggaagtatgat
gaggatcgttcgggtaccatgtcgtcgtatgaaatgcgagcagctctcaatgcagcagga
ttccacctgaacaaccagatgtatcagctgatcaccatgcgctacgccgacgagagtatg
accatcaagtttaatgactacattacctgtatggtgcgattggaggccatgttcagaata
ttccatgcccttgacaaagacaaacgtggcgttatcagactgggactgggtttgtggctg
cagttgaccatgtacgcatga
DBGET
integrated database retrieval system
