Lethenteron reissneri (Far Eastern brook lamprey): 133347632
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Entry
133347632 CDS
T09663
Name
(RefSeq) uncharacterized protein LOC133347632
KO
K16499
protocadherin delta 2
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lrj04515
]
133347632
Cell adhesion molecules [BR:
lrj04515
]
Cadherins
Protocadherins
133347632
BRITE hierarchy
Motif
Pfam:
Cadherin
Cadherin_2
Lin-8
REV
Motif
Other DBs
NCBI-GeneID:
133347632
NCBI-ProteinID:
XP_061416057
LinkDB
All DBs
Position
26:complement(9436779..9482537)
Genome browser
AA seq
1704 aa
AA seq
DB search
MPHGSARPPSLRKPRRQRRRTPFSTAVALIALLALHAASGAPQAPSPSQGSPDAQPGPAA
LVATTLRYSVPEESAPGTLVGRAAFDLGLPGPADLRSRNFRSLPSGNGTAYVTASEQSGE
LRLSGKRLDREEICRHGGGGGGGGGGGVGAGHFVGGGGAGGGISSMAGSGRAGGSDGDTD
ACVLSLELMLDSPPLLARVFVSVLDVNDHAPSFAESLVSLEVPESAAVGTRLPLPPASDP
DSGSNGLQRYELVPDGDGGGGVDGERDDAFVLRLEAGGVVSNGLVVWLWGSTAGTGGSAG
SGGAAAAAAGGGGGGPGGINGVGGGGGGGGGTPQSPELVLARALDRETRARHSFVLRAWD
GGSPPRWGAARVTVTVTDVNDHVPRFERSEYLARVREGGPAGQGWPRGGPLVVLRARDPD
EGANGEVRYSLGDHVSDDIRHLFAVDPTSGHVTLRAPLDYETATSYEFSVQARDLGVHSV
PAHARVLVRVLDVNDNAPSIEIMPLARSTGPGEPVSVSEGAPPGTLLALIRATDRDSGPN
GQVTCTLADTAPPLSSSSSSSSPTTVMTAATMPMRLPFELRPSGDDWTLVTSGPLDRESL
VGLATGSAAAATGAGTGGPYHHHQHHQQQLQQQQQPPLHTPALINLTVVATDGGDPPLSS
SATFSVRLADVNDNAPRFSRPSYVFRVGENNIPGAYLGSVSASDPDEGANAAVSYSLVEA
TLDGMPAFTYVSVNPASGAVYALRSFDRGRRHRLLFGVAASDGGHPRLSATAAVTVLVVG
DGAVDDGGDRAAPEFLSPDMGANRSAVVSARAGLPAGSLVLRLRARDPDGFDDVDGVDES
VAGAGPGGGEGGAADVVGTSSGLRYAIAAGNEARWFRVDPRLGDVRAARDLPRRAARFRL
LVTATDCGAGCDAASASAAAVSDSSAPAVTSTATVTVLVSDPEAGPDAGAGDAGGEGDHR
IYEDSGGVGVGGVGGGGAGGRGGTGDDDGGRAFATSFVIIAALGAVSFALLMAMVAIALR
CKHHKARPPADGHSKRERRRERRRERERRRERERDVGACEKPVTPPLGREPSVYRSLLPS
ELTMTRQADEATVPCKDVEEEGGGGGGGGGGGGAGGGTGGPGAGERRASVYAVRTDGAAC
GSRQPDLLPVGPEQARTHKYLDPGALGARNPPRSEADRLSFKDSGHGDSDTGADSDADTA
RGSLSEADGPTHGPTHGPPCTHGPHGTHEKVGVRCTDECRVMGHSDSCWMPHDEHLHHHL
HHQHHLHHRQQQQQQQQQQQQQQQQHSHQPPDQHHHHLHQQQQQQQSQQPQPEVPKTVGV
RTRAPEEPAEKSGVERVPLAQSRGPFSTFGKSLGAFSSSSSSASSSASSSSSSSSSSSSS
ISSASAGKPPESLSLKDFKTSKQAPLSVGQPLATSKSSTKQPVSSPPSSLSSSSSSSQAG
DQGGGMKASAYEAKHPRPPPGTGRGCAETEFTVPFSRDIDYDEADFGGGGGGGSGIRYER
GAPLPPCTAPCCAGPDAGTTAKSPDNSLGATRPVLRPGPYPGPDPGIDADSGTPYPSEGT
EPGHTRFDPNPNANPKAYRPNVSTNPGRLHPNSNTHCNPGANLSCPSTAFTNPSAAPNPH
SNPVSNPQANANVSLCRPPGVARSQGGLMKPRPHPRPGHTKGLFKAGPRPQACCSPSPAT
GGPPRRLPTIPEPLHAETDETELG
NT seq
5115 nt
NT seq
+upstream
nt +downstream
nt
atgccccacggatcagcgaggccaccgtcgcttaggaagccgagacggcagcgcagaagg
actcccttctccacggcggtcgcgctcatcgccttgctggcgctgcacgccgcgtcgggg
gccccgcaagccccatcgccatcgcagggctccccggacgcccagccgggccccgcggcg
ctggtggccaccaccctgcgctactccgtgccggaggagagcgcgccgggcacgctggtc
ggccgcgcggccttcgacctgggcctcccgggccccgccgacctccgctcgcgcaacttc
cgctcgctgccctcgggcaacggcaccgcgtacgtgacggccagcgagcagagcggggag
ctgcggctcagtggcaagcggctagaccgggaggagatctgccggcacgggggcggcgga
ggtggcggcggcggcggtggagtaggtgccggacattttgttggcgggggaggtgccggt
ggcggcatctcctcgatggcggggtcagggcgtgcgggaggttccgatggagacacggac
gcctgcgtgctgtccctggagctcatgctggactcgccgccgctgctggcgcgggtgttc
gtcagcgtcctcgacgtcaacgaccacgcacccagtttcgccgagtcgctcgtctcgctg
gaggtgccggagagcgccgccgtggggactcgactgcccctgccgcccgccagcgacccg
gactccggctccaatggactccagcgctacgagctggtgccagacggagacggcggcggc
ggcgtcgacggagagagagacgacgcgttcgtcctgcgtctcgaggctggaggtgtggtg
agcaacggcctggtggtgtggctctggggcagcaccgccggtaccggtggtagcgctggc
tctggcggtgctgccgccgccgctgctggtggtggtggtggcgggcccggtggcatcaac
ggcgttggtgggggcggtggaggaggcggaggaacccctcagtcgcccgagctggtgctg
gcgcgagccctggaccgagagacgcgcgcgcgccactcgttcgtgctgcgcgcgtgggac
gggggcagccccccgcggtggggggcggcgcgcgtcaccgtcaccgtcaccgacgtcaac
gaccacgtcccacgattcgagcgcagcgagtacctggcgcgcgtgcgcgagggcggcccg
gctggacagggctggccacgaggaggccccctcgttgtgctgcgtgcacgtgaccccgac
gagggtgctaacggggaggttcgctactcgctgggcgaccacgtctccgacgatatccgc
cacctcttcgctgtcgaccccacgagcggccacgtcaccttgcgagctcctctggactac
gagacggcgacgtcgtacgagttctcggtgcaggcgcgggacctgggcgtgcacagcgtc
cctgcccacgctcgcgtcctcgtccgggtgctcgacgtaaatgacaacgcgcccagcatc
gagatcatgcctctggctcgcagcacgggcccaggggagccggtttcggtgtcggagggg
gcgccgcccggcacgctgctcgcgctcatccgcgccaccgaccgcgactcgggccccaac
gggcaggtgacgtgcaccctcgccgacaccgcccccccactctcctcctcctcctcttcg
tcatcgccaacgacggtcatgacggcggcgacgatgccgatgcggctcccgtttgagctg
cgcccgtcaggcgacgactggacgctggtcacctctgggccgcttgaccgcgagagcctc
gtaggcctcgccaccggctccgccgctgccgccaccggtgccggcaccggtggaccgtac
caccaccaccagcaccaccagcagcagctgcagcagcagcagcagccgccgctgcacacg
ccggcgctcatcaacctcacggtggtggcgacggacggcggcgacccgccgttgtcatcc
agcgcgaccttttcggtgcgcctcgccgacgtcaacgacaacgccccgcgcttctcgcgc
ccctcttacgtgttccgcgtcggcgagaacaacatccccggcgcctacctgggctcggtg
agcgccagtgaccccgacgagggcgccaacgcggccgtctcctactcgctggtggaggcc
acgctggacggcatgccggccttcacctacgtgtccgtaaacccggcgagcggcgcggtg
tacgcgctgcgcagcttcgaccgcggccgccgccaccggctgctgttcggcgtggcggcg
agcgacgggggccacccgcggctctcggccaccgccgccgtcaccgtcctcgtggtgggc
gatggcgccgtcgacgacggcggcgaccgcgcggcgcccgagtttttgtcgcccgatatg
ggcgccaaccgcagcgccgtggtgagcgcgcgggcggggctgcccgcaggctcgctcgtc
ctgcgcctgcgtgcccgcgatcccgacggcttcgacgacgttgatggcgtcgacgaaagc
gtcgccggggcagggcccggcggaggcgaggggggcgccgccgacgtcgtgggcaccagc
tcggggctgcgctacgccatcgcggcggggaacgaggcgcgctggttccgcgtggaccct
cgcctgggcgacgtgagggcggcgcgcgacctcccgcgccgcgcggcgcggttccgcctc
ctcgtcacagccaccgactgcggcgccggctgtgacgctgcctcagcctctgccgccgcc
gtctccgactcctcggcgcccgcggtgacgtccacggccaccgtcaccgtgctcgtgtcc
gaccccgaggcagggcctgacgctggagcaggcgacgccggcggagagggcgaccaccgg
atttatgaagacagcggcggcgtcggcgtcggtggcgttggcggcggcggcgccgggggt
cggggcggcaccggcgacgacgacggggggagggccttcgccacgtcgtttgtgatcatc
gcggcgctgggcgcggtgtcgttcgcgctgctcatggcgatggtggccatcgcgctgcgc
tgcaagcaccacaaggcgcggccgcccgcggacggacacagcaagcgcgagaggaggcgc
gagcgaaggcgggagcgcgagcggaggcgcgagcgggagagggacgtgggggcatgtgag
aagcccgtcacgccacccctgggacgagagcccagcgtgtaccgctcactgctcccgtcg
gagctgaccatgacgcggcaggcggacgaggccaccgtcccgtgcaaggacgtggaggag
gagggcggtggcggcggcggtggcggcggaggaggaggcgccggcggaggcacggggggg
ccaggcgcgggcgagcgcagggcctccgtctacgccgtccgcaccgacggcgccgcgtgc
gggagccgccagccggacctcctgcctgtgggacctgagcaagcgaggactcacaagtac
ctggacccaggggctttgggggcccgaaatcctccacgcagcgaggcagacaggctgagc
ttcaaggacagcggacacggggacagcgacacgggcgcggacagcgacgcggacacggcg
cgagggtcgctcagcgaagccgacggccccacgcacggccccacgcacggcccgccctgc
acacacgggccacacgggacgcacgaaaaagtcggtgtccgctgcacggatgagtgccgg
gtcatgggccactcggactcgtgctggatgccccacgacgagcacctccatcaccacctt
caccaccaacaccacctccaccaccggcagcagcagcagcaacagcagcaacagcagcaa
cagcagcaacaacagcacagccaccagccgcccgaccaacaccaccaccaccttcaccag
cagcagcagcagcagcagtcgcagcagccgcagcctgaggttcccaagaccgtgggtgta
cgaacccgcgcgccagaggagccggcagaaaagtccggcgtcgagcgagtgccgttggcc
caatcacggggcccgttctccacctttggcaagagcctgggggccttctcttcgtcgtca
tcatcggcatcgtcctcagcgtcgtcctcctcttcgtcctcgtcctcctcgtcttcgtcc
atctcgtcggcctcggcgggcaagcctccggagagcctctcgctcaaagattttaaaaca
tccaagcaggcaccgttgtctgtcgggcagcccctggcaacgtcaaaatcctccactaag
cagcccgtgtcttctcctccgtcatcgttatcttcgtcgtcgtcgtcaagtcaagccggg
gatcaaggtggggggatgaaggcctcagcctacgaggccaagcatccacggccgcctccg
ggcaccggccggggctgcgccgagacagagttcacggtgccgttcagtcgcgacatcgat
tatgacgaagccgattttggtggtggcggcggtggcggcagcggcatacgctatgagcga
ggtgcaccactaccgccctgcaccgcgccctgctgtgccggccccgatgcggggacgacc
gccaagtcccccgacaacagccttggtgccacccggccagtcctcaggcccggtccttac
cctggccctgaccccggcattgacgccgactcgggcaccccgtacccatcggagggcacc
gagcccgggcacacgcggttcgaccccaaccctaatgccaacccaaaagcataccgaccc
aatgtcagcactaacccgggaaggcttcacccaaattctaacacccactgtaaccccggt
gccaatctgagctgcccaagcactgcatttactaaccccagtgcagccccgaacccacac
tccaaccccgtgtccaacccccaggccaacgccaacgtgagcctctgcaggcctcccggg
gtcgcaaggtcccagggaggcctcatgaaaccgcgtccccacccgaggccgggccacacc
aagggcctcttcaaggccgggcctcggcctcaggcctgctgctcgcccagtccggctacc
ggggggccccctcgcaggctacctacaattcctgagcccctgcacgcagagacggatgag
acggagctcgggtag
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