Lethenteron reissneri (Far Eastern brook lamprey): 133347640
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Entry
133347640 CDS
T09663
Name
(RefSeq) cytoplasmic FMR1-interacting protein 2 isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04519
Cadherin signaling
lrj04810
Regulation of actin cytoskeleton
lrj05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
133347640
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
133347640
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
133347640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrj03019
]
133347640
Messenger RNA biogenesis [BR:
lrj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
133347640
Factors involved in mRNA localization
Other mRNA localization factors
133347640
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
BP28CT
WASH-4_N
Motif
Other DBs
NCBI-GeneID:
133347640
NCBI-ProteinID:
XP_061416074
LinkDB
All DBs
Position
26:9716387..9749113
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AA seq
1268 aa
AA seq
DB search
MNMAQAQVSLEDALSNVDLLEELPLPDQQPCIEPPPSSILYQANFDTNFEDRNAFVTGIA
RYIEQATVHSGMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEP
EVTKLMRFMYFQRKAIERFCGEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNM
KCSVKNDYSAYKRAAQFLRKMSDPQSIQESQNLSMFLANHNRITQSLQQQLEVIPGYEEL
LADIVNLCMDYYEGRMYLTPGEKHTLLKVMGFGLFLMDGSVSNIYRLDAKKRINLGRIDR
YFRQLQVVPLFGDMQIELARYIETSAHYEDNRSKWTCTCSTLSPQYICEQMVQIRDDHIR
FTSELSRHSNSEVVTGSGQDGHKSDEQHKELCDLALRGLQLLSRWSAHVMEVYSWKLVHP
TDKFSNKDCPDNAEEYERATRYNYSSEEKCALVEVIAMIKGLQVLMGRMESVFNQAIRHT
VYAALQDFAQITLREPLRQAVKRKKNLIISILQAIRKTCGDWEGGAEPASDPCLRGEKDP
KGGFELHVPRRTVGPSSTQLYMVRTMLESLIADKSGSRKTLRSCLEGPTITAIEEIHRSS
FFYTHLLNFSEALQACCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPS
MMEYVLYPLDLYNDSAHYALTKFKKQFLYDEIEAEVNLCFDQFVYKLSDQIFAYYKALAG
SVLLDKRFRTECKNHGVVIPYPPSNRYETLLKQRHVQLLGRSIDLNRLVTQRVTAAMYKS
LELAISRFDSENLTSIVELEALVEVNRLTHKFLSKRLTLDNFDAMFREANHNVSAPYGRI
TLHVFWELNYDFLPNYCYNGSTGRFVRTPYPFTQDLQRDKPPNVQPHYLFGSKPLNIAYT
HVFATYRNFVGAPHLRTMCRLLGYQGIAVVMEELLKIIKSLLQGTILQYVKTLMEVMPTI
CRLPRHEYGSPGILEFFHHQLKDIVEYAELKTDVFQSLREVGNAVVFCLLTEQSLSQEEV
CDLLHAAPFQNILPRVYVKEGERLETKMRRLEQKYSSLHLVPLIERLGTAQQIAIAREGD
LLTKERLCCGLSMFEVILQRAGTCLDDPVWRGPPPANGVMHVDECVQFHRLWSAMQFVYC
IPVGTHEFTAEQCFGDGLNWAGCAVMTLLGQQRRFDLLDFCYHLLKVQRQDGKDDVIKNV
PLKKMVERIRRYQILNNSIFAVLNKYLRGSEWDPAHTAPPPHGHSDGLPAEHVRCFQPPI
HQSLASTI
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgaacatggcgcaggcccaggtgagcctggaggacgccttgtccaacgtggacctgctt
gaggagctgcccctgcctgaccagcagccgtgcatcgagcctccaccctcctccatcctc
taccaggcgaacttcgacaccaactttgaagaccgcaatgcgtttgtgacggggattgcg
cgctacatcgagcaggcaaccgtgcactcaggcatgaacgagatgctggaggaaggacag
gagtatgctgtgatgttgtacacctggagaagttgttcacgcgcaattccccaggtgaag
tgtaacgagcaaccaaaccgcgtagagatctacgagaagacggtggaagtgctggagcca
gaggtcaccaagctcatgcgcttcatgtatttccagcgcaaggccattgaacggttctgt
ggcgaggtgaagcgtctgtgccacgctgagcgcaggaaggacttcgtgtcggaggcatac
ctcctcacgctgggaaaattcatcaacatgttcgccgtacttgacgaactcaagaacatg
aaatgcagcgtgaagaacgactacagtgcttacaagagggctgcccagtttttgaggaag
atgtctgatccacaatccatccaggagtctcagaacctgtccatgttcctggccaatcac
aaccgcatcacccagtccttacagcagcagttggaggtgatccctgggtacgaggagctg
ctggccgacattgtgaacttgtgcatggattactacgaggggcgcatgtacctcacgccc
ggcgagaagcacaccctgctcaaggtgatggggtttgggctgttcctgatggacggctcc
gtcagcaacatctaccgtctcgacgccaagaagagaatcaacctcggacgcatagaccgc
tacttccggcagctgcaggtggtgccgttgtttggagacatgcagatagagctggcgcgg
tacatagagaccagtgcccattacgaggacaaccgctccaagtggacgtgtacttgcagc
acgctcagcccccagtacatctgtgagcagatggtgcagatccgtgatgaccacatccgt
ttcacctctgagctgagccgacacagcaacagcgaggtggtgaccggctcaggccaggat
ggacacaagtcagatgagcagcacaaggagctgtgtgatctggcgctgcgtggactgcag
ctgctgtctcgctggagcgcacatgtcatggaggtgtactcatggaagctcgtgcaccct
acggacaaattctctaacaaggactgcccagacaatgcagaggaatatgagcgtgcgaca
cgctacaactactccagcgaggagaagtgtgcactggttgaggtgattgcaatgatcaaa
gggctgcaggtgctcatggggcgcatggagagtgttttcaaccaggcgatccggcacacc
gtgtacgccgcgctgcaggactttgcacagatcacgctccgagaaccgctccgccaagcg
gtcaagcgcaagaagaacctcatcatcagcatcttgcaggcgatccgcaagacgtgcggg
gactgggagggcggcgcagagccagcctctgacccctgcctgcgtggggagaaggacccc
aagggtggcttcgagctgcacgtgcccaggcgcacagtggggccgtctagcacacagctg
tacatggttcgcaccatgctagagtctctgatcgctgacaaaagcggctcgcgcaagact
ctgcgctcatgccttgagggcccaaccatcaccgccatcgaggagatccaccgctcgtcc
ttcttctacacccacctccttaacttcagcgaggccctgcaggcatgctgcgacctctca
cagctgtggtttcgggagttcttcctggagctgacaatggggcgacggattcagttccct
atcgagatgtccatgccctggatcctcacagaccatatcttggagacgaaggagcccagc
atgatggagtatgtgttgtacccactggacctgtacaatgacagtgctcactacgccctc
accaagttcaagaaacagttcctgtatgatgagatcgaggctgaggtgaacctctgcttt
gaccagtttgtttacaagctttcggaccaaatctttgcttactacaaggcgctggctgga
agtgtgctgctggacaagcgtttccgaacagagtgcaagaaccatggcgtggttatcccc
tacccaccttcaaaccgctacgaaacactgctcaagcagcgccacgtgcagctcctcggc
cgctcgattgacctgaatcgcctggtaacgcagcgtgtgacggccgccatgtacaagtcc
ctggagcttgccatctcccgcttcgacagcgagaaccttacctccatcgtggagctggag
gccctggtggaggtgaaccgcctaactcacaagttcctcagcaagagactcaccttggac
aactttgacgcaatgttccgtgaggcgaaccacaacgtgtcggcgccgtacgggcgtatc
actctgcacgtcttctgggagctcaactatgactttctgcccaactactgctacaacggc
tccactgggaggtttgtacgcacgccgtaccccttcacgcaggacctgcagagagacaaa
cctcccaacgtgcaaccacactacctcttcggctccaagcccctcaacatcgcatacacg
cacgtgttcgccacgtaccgcaactttgtgggagcgccgcacctgcgtaccatgtgccgc
ctccttggctaccagggcatcgccgtggtgatggaggagctgctcaagatcatcaagagc
ctgttgcagggaacaatcctgcagtacgtgaagaccctgatggaggtgatgccgacgatc
tgtcgcctgccgcgacacgaatacggctctcctggcatcttggagttcttccatcaccag
ctgaaggacatcgtggagtacgcagagctcaagactgacgtcttccagagcctcagggag
gtcggcaacgctgtcgtcttctgcctacttaccgagcagagcctgtcccaggaggaggtg
tgcgatctactccacgccgcgccctttcagaatatccttcctcgagtctacgtcaaggag
ggggaacgtttggaaactaagatgcgtcgtttggagcagaaatactcatccctgcacctg
gtgccgctcatagaacggctgggaactgcacagcaaatcgccatcgcccgagagggagac
ctgctcaccaaggagcgcctctgctgtggcctatccatgttcgaggtgatcctgcagcga
gcgggcacgtgcctggacgaccccgtgtggcgaggaccaccgccggccaacggcgtgatg
cacgtggacgagtgcgtgcagttccaccgcctgtggagcgccatgcagtttgtctactgc
atccccgtgggcacgcacgaattcactgcagagcagtgctttggagacgggctgaactgg
gcgggttgtgcggtgatgacgctgctcgggcagcagaggaggtttgacctcctcgacttc
tgctaccacctgctcaaggtgcagaggcaggacggcaaggacgacgtgatcaagaacgtg
ccattgaaaaagatggtggagcggatccggcgataccagatcctaaacaacagcatcttc
gccgttctcaacaagtatctacgcggctccgagtgggacccggcccacacggcgccaccg
ccacacgggcacagtgacgggcttcccgccgaacacgtgcgctgcttccagccacctatc
caccagtcgctcgccagcaccatctaa
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