Lethenteron reissneri (Far Eastern brook lamprey): 133347666
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Entry
133347666 CDS
T09663
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1 isoform X1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrj03041
]
133347666 (DDX1)
03016 Transfer RNA biogenesis [BR:
lrj03016
]
133347666 (DDX1)
Enzymes [BR:
lrj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133347666 (DDX1)
Spliceosome [BR:
lrj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
133347666 (DDX1)
Transfer RNA biogenesis [BR:
lrj03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
133347666 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
ResIII
Motif
Other DBs
NCBI-GeneID:
133347666
NCBI-ProteinID:
XP_061416122
LinkDB
All DBs
Position
26:complement(10933840..10951824)
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AA seq
741 aa
AA seq
DB search
MTAFSEMGVMPEIAQAVEEMGWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKGGKVSVSSKPAVLNKWQMNPYDRGTAFAIGPDGLCCQSREFKDWH
GCRSTKGVTKGKYYYEITCNDEGLCRVGWSTIKAALDLGTDKFGFGFGGTGKKSNNKQFD
TYGESFTMHDVVGSYIDMDAGTIKFAKNGKDLGLAFEIPPPLKGQAMFASCVLKNGELQF
NMGEEDFKFPPKDGYIALAKAPQNCTATSEYRGSTAMAQPKNQPNAPKALIIEPSRELAE
QTYNNVCQFRKHVDNPKLRELLIIGGVAAKDQLQGIIDGVDIVIGTPGRIDDLVSTGKLS
VSQVRFFVLDEADGLISQGNLDFITRLHRQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPIWVDLKGEDCVPESVHHVVVPVNPKADRSWERLTSNRIMTDGVHQKDNTRPGAN
SSEMWSEAVKLLKGEYVLCAIREHKMDQAIIFCRTKLDCDNLEQYMIKSGGGPDKKQHQY
SCVCLHSDRKPNERKINLERFKKAEVRFMICTDVAARGIDITGIPFVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVATEKEKVWYHVCANRGRGCYNTRLKDEGGCTIWYNEQQLLA
DVEEHLGITVQQVEPDIKVPADEFDGKVVYGQKKAAGGSGGYKGHVDLLAPSVQELAALE
SEAQLSFLQLGFLPNQSFRAF
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgacggctttctcggagatgggtgtgatgcccgagattgctcaggctgtggaggagatg
ggctggctacttccaacagacattcaggcggaatctattccactcattcttggaggtggt
gatgtcctcatggctgcagaaactggcagtggtaaaactggagcattcagcatccccgtc
atccagattgtgtacgagactctgaaggaccagcaggagggaaaaggaggaaaagtttca
gtgagttccaaaccagcagtgttgaacaagtggcagatgaacccatatgataggggcact
gcgttcgcaattgggcctgatggactctgctgccaaagccgagagttcaaggactggcat
ggctgtcgctccactaaaggtgtcaccaaaggaaaatactattatgaaataacgtgcaac
gatgaaggtttgtgccgtgtgggttggtccacaataaaagctgctcttgacttgggcact
gacaagtttggttttgggtttggtggaacggggaagaaatccaacaacaagcagttcgac
acttatggagagtcattcacaatgcatgacgttgtgggatcctacattgacatggatgct
ggaaccatcaaatttgccaaaaatggcaaagatttgggtttggcatttgaaatccctcca
cctctgaagggccaagctatgtttgcttcctgtgttctgaagaatggagaactgcagttt
aacatgggcgaggaagacttcaagttcccacccaaggatggctacatcgctctggccaaa
gcacctcagaactgcacagctacatccgaatacagaggcagcacggccatggcacagccc
aagaaccagcccaacgctcccaaggctcttatcattgagccatcgcgggagctagcagag
cagacctacaacaacgtctgccagttcaggaagcatgtggacaacccaaaactgagagaa
ttgctcattatcggtggtgtggcagcaaaagatcaactgcagggcataatcgatggggtt
gacattgttattggaacacctggcagaattgacgatctcgtttcaactggcaagctgtca
gtgtcccaagtgcgcttctttgtgttggatgaagcggatgggttgataagtcaaggaaac
cttgacttcatcacacgtctccacagacagatccctcaggtcacatcagatggcaagcga
ctgcaggtgatcgtgtgctcggccaccctgcattccttcgatgtgaagaaactgtccgag
aagatcatgcacttcccaatctgggtggacctgaagggggaggactgcgtgcccgagtct
gtgcaccatgtggtggtgcctgtcaatcccaaggccgaccgctcctgggagcgcctgacc
agcaaccgcattatgacagatggtgtgcatcagaaggataatacaagacctggagccaac
agctctgagatgtggtcagaggccgtcaagttactgaaaggcgagtacgtcttgtgtgcc
attcgtgagcataagatggaccaggcgatcatcttttgccgtaccaaactcgactgcgac
aacctggagcagtacatgattaaatctggaggagggcctgacaaaaaacaacaccagtac
tcctgcgtttgcctgcacagcgaccgaaaaccaaacgaacgcaaaatcaacctggaaagg
tttaagaaagcggaagtgcggttcatgatttgtactgatgttgcagcaagaggcatcgat
attactgggattccttttgtgataaacgtgacacttcccgacgaaaagcagaactacgtc
catcgcattggcagagtaggcagagctgagagaatggggttggccatctccttggtagca
acggaaaaagaaaaggtgtggtaccacgtgtgcgccaaccgcgggcgcggttgctacaac
acgaggctgaaggatgaaggtggctgcaccatctggtacaacgagcaacagctcctagca
gatgtggaggagcacctgggcatcaccgtccagcaggtggagccagacatcaaagtgcct
gcggacgagtttgacgggaaggtggtgtacggccagaagaaagcagctggaggcagcggc
ggctacaagggccatgtggacttgctggcgccgagtgtgcaggagcttgccgcacttgag
agcgaagctcagttgtctttcctgcaactggggttccttcccaaccagtcgttccgcgcc
ttctga
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