Lethenteron reissneri (Far Eastern brook lamprey): 133347706
Help
Entry
133347706 CDS
T09663
Name
(RefSeq) transcription factor Sox-9-B-like
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lrj03000
]
133347706
Transcription factors [BR:
lrj03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
133347706
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
133347706
NCBI-ProteinID:
XP_061416188
LinkDB
All DBs
Position
26:complement(12500987..12506831)
Genome browser
AA seq
534 aa
AA seq
DB search
MMSDEHDKHMSDVPSPDMSETCSVGSPADSLAGSDSDSQSCGSKRCSDREDGAGASGLLL
AGGPGGVLDGGVVFGLGRDAGSGKKMDEDDKFPACIREAVSQVLKGYDWTLVPMPVRVNG
SSKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLSENEKRPFVEE
AERLRVQHKKDHPDYKYQPRRRKSGKNGQSESDSSGEQTHITTNAIYKALQADSPSGDVH
SPGEHSGQSQGPPTPPTTPKTDAQSNKLDIKREGRPLQEGGRQQIDFSNVDIRELSREVI
SNMESFDVNEFDQYLPPNGHPGHGQSVAASYGGTGYSINGHAWLSKQQQQQQQQQQQQHT
LSSPPPPPAISSPEQRAHVKTEQLSPSHYSDQQQQQQQPQQQQHSPQQQQQQQQPQQAQQ
AQQQVQQQQQLGGYSPFSIQHYGAAVVPAISRSQYSYADHHHHHHHQSSAAAAAYYSGHS
AGQAAGLYSGFSYMGPSQRPSYTPIADATGVPSIPQPHSPPSWEQPVYTQLTRP
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcagacgagcacgacaagcacatgtcggacgtgcccagcccagacatgtcggag
acctgctccgtgggctcgcccgccgactcgctggcgggctccgacagcgacagccagagc
tgcggctccaagcgctgttcggaccgcgaggacggcgccggcgcgagcggtctcctgctc
gccggcggcccgggaggggtgctggacggcggggtggtattcggcctcggcagagacgcg
ggctccggcaagaagatggacgaggacgacaagttccccgcctgcatccgcgaggccgtg
agccaggtgctcaagggctacgactggaccctcgtgcccatgcccgtgagggtgaacggc
tcctccaagtcgaagccgcacgtgaagaggcccatgaacgcgttcatggtgtgggcgcag
gcggcgcgccgcaagctcgccgaccagtacccgcacctgcacaacgccgagctgagcaag
acgctgggcaaactgtggcgcttgctgagcgagaacgagaagcgtccgttcgtggaggag
gcggagcgcctgcgggttcagcacaagaaggaccaccccgactacaagtaccagccgagg
cggagaaagtcgggcaagaacggccagagcgagtccgactcgtcgggcgagcagacgcac
atcaccaccaacgccatttacaaggcgctccaagcggactcgcccagcggggacgtgcac
tctcccggcgagcactctgggcagtcccagggcccacccacgcctcccacgaccccgaag
acggacgcgcagtccaacaagctggatataaagcgcgaggggcgccctctgcaggaaggc
ggccgccagcaaatcgacttcagcaacgtggacatacgggagctcagtcgggaggtcatc
tccaacatggaatcgttcgacgtcaacgaattcgaccagtacctgccacccaacggtcac
cccggtcacggccagagcgtggcggcctcttacggaggcacaggctacagcatcaatgga
cacgcctggctgtccaagcagcagcagcagcaacagcagcagcagcaacagcagcacacg
ttgtcatcaccaccaccaccacctgccattagcagtcccgagcagagagcgcatgtcaag
actgagcagctgagtcccagccactacagcgaccaacagcagcaacaacagcagccgcag
cagcagcagcattcgcctcaacaacaacagcagcagcagcagcctcagcaggcacagcag
gcacagcagcaagtgcaacagcagcagcagctgggaggctacagcccctttagcatccag
cactacggggcagctgtagtgccggctataagcaggtcccagtacagctacgcggaccac
catcaccaccaccaccatcagagctctgcggcggccgcggcttactacagcgggcattct
gcggggcaggcagccggcctgtactccggcttctcctacatggggccctcgcagcggccg
tcttacactcccatcgcggacgccacgggggtgccctccatcccccagccgcacagcccc
ccgtcctgggagcagcccgtgtacacccagctcacgaggccatga
DBGET
integrated database retrieval system
