Lethenteron reissneri (Far Eastern brook lamprey): 133347724
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Entry
133347724 CDS
T09663
Name
(RefSeq) LOW QUALITY PROTEIN: TBC1 domain family member 9-like
KO
K19951
TBC1 domain family member 8/9
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrj04131
]
133347724
Membrane trafficking [BR:
lrj04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
133347724
Endosome - Golgi transport
Rab GTPases and associated proteins
133347724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_7
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
133347724
NCBI-ProteinID:
XP_061416226
LinkDB
All DBs
Position
26:complement(16984197..17019107)
Genome browser
AA seq
1475 aa
AA seq
DB search
MWLKPEEVLLANALWVTERANPYFLMQRRRGHGDGGGLTGLLVGTLDVVLDSSARISPYR
VLHQTPESQVYWAIATGSSRQEATRHWDWLEQNLLQTLSVFETEEDVTEFVKGKVQGIMA
EEGRQRGGTAGAAGAEQDSDKFMEAVAKFRKLFGMPEEERLVNYYSCSYWKGRVPRQGWL
YLSVNHICFYSLLLGKEAKLVVRWADVMCLERTATVVLPESVRVATRDGDLFFSMFLSVG
ETFRLMERLADMAVRRLLNSGDAAPGSSSASQMDASAGGGSGGGIGGGGGGAAGGGLVGA
GSLPGGLGAAAGGGGGAGGGGPAGGGGGAGGGGNTRSPRKVSALKRDLDARVKSEAYCSA
FRLPRDERLDGHTDCTLWLPFSKMHAAGQLYVSSNYLCFSSREEGLCSLVIPLREVTVVE
KADSSSVLPSPLSVSTRSRTNFLFANLRDRAFLLQRISELLRSSSAVGKQQGAAVAPTPT
AGTPSSQQGSQPQPNGADAGSAAVWRGXSERGATPSNAPQETTEALMTMFHRSDSHTIDL
KQAKELMKEESWSIHFAEFGRGVCMYRTERTRDLVMRGIPESLRGELWMHFSGAIHEMNS
YPGYYAELVRSSMGRMSLVTDEIERDLHRSLPEHPAFQSEMGIAALRRVLTAYAHRNPSI
GYCQAMNIVTSVLLLYTKEEEAFWLLVALCERMLPDYYNTRVVGALVDQGVFEELTREHL
PQLCERMQDLGVISTISLSWFLTLFLSVLPFSSAVCVVDCFMLDGVRMIFQLALAVLHAN
MSKLLSCHDDGEAMTILGSYLDSVTNKDSTLPPITHLHALLSENTEPQPEVDIFQLIRTS
YERFGCIRAEVIEQMRFRQRLRVIQTLEDTTKRNVVRSIMTETQFTLEELEELFVLFKWE
HLRSCYWGSATAATTGNGGAGVSGGGSDGDGGSTAVPVSERHDPSLPYLEQYRVDAAQLH
SLLAALSPWVRGPHPPPLAPRLFRLLDTNRDGLINFKEFVSALGIMYHGDLTEKLKLLYK
LHLPPALSPSEHEETESALEATRFFYEDITPCTPQHVGVPKRAGDAYSDLDINTPEHRAL
WHSRGMVSDVDDAHLAELTEGSLSVDNTRIDKGGAEARDYRYYLRKWAQETELKKESIKD
LPKMNQEQFILLCKSLYSLFAEHPHEQQLYHSIATVASLLLELGEVGKRFSQHRNRTAGN
TATAGNAASSGNAAATAAMNLTANSTDDSIDRMVDEMAEEVASASDVAIGGGQEEAPSMP
RKDERDRASLNNLVVSDDEFNSKDDTSVSSYSVVSAGSIPCSDDGCSSDDGAVVLAAPTA
GGSRRSSGNGGGEAAAGGSCPPRAAPAAAGASSSLAATAAASTPPRRSPARGRPDREWAV
SFEQFLASSLTEAALVSFFEETPPPSSLMERVRSAKTGRAIPECPSPSPTTAVDAVRFPG
DGRAMSPGQGESGDGKTPGRGSPGVADPFAASLAV
NT seq
4428 nt
NT seq
+upstream
nt +downstream
nt
atgtggctcaagccggaggaggttctgctggcaaacgcgctgtgggtgacggagcgcgcc
aacccgtacttcttgatgcagaggcgacgcggccacggcgacggaggcggtctcacaggc
ctgctggtgggcaccctggacgtggtgctggactcgagcgcccgtatcagcccgtaccgt
gtgctgcaccagacgcccgagtcgcaggtctactgggccattgctaccggaagctctcgg
caggaggcaacgcggcactgggattggctggaacagaacctgctgcagacgctgagcgtg
ttcgaaacggaggaggatgtcacggagttcgtcaagggcaaagtgcagggtataatggca
gaggaggggcggcagcgcggcggcacggccggtgcggcgggagccgagcaggactcggat
aagttcatggaggccgtggccaagttccgtaagctgttcgggatgcccgaggaagagcgc
cttgtcaactactactcctgcagctactggaagggccgcgtgccgcgccagggctggctc
tacctcagcgtcaaccacatctgtttctactcgctgctgctcggcaaggaggccaagcta
gtggtgcgctgggcggacgtgatgtgcctggagcgcaccgccacggtggtgttgcccgag
agcgtacgcgtggcgacgcgcgacggcgacctcttcttctccatgttcctctccgtgggt
gagacgttccgtctcatggagcgtctcgccgacatggccgtgcgccgcctgctcaacagc
ggcgacgccgccccgggctcctccagcgcctcccagatggacgccagtgcaggcggcgga
agtggcggcggcattggcggtggcggtggcggagctgcgggcggtgggcttgttggtgcc
gggtccctccccgggggccttggggccgctgctggtggtggtggcggcgccggcgggggg
ggacctgcgggggggggtggcggggcgggcggcgggggcaacacgaggtccccgcgcaag
gtgtcggcgctcaagcgagacctggatgcgcgcgtgaagagcgaggcatactgctcagca
ttccgcctgccccgcgacgagaggctcgacggacacacggactgcacgctgtggctgccc
ttcagcaagatgcacgccgccgggcagctctacgtctcctccaactacctgtgcttctcc
agccgcgaggagggcctctgcagccttgtcatcccactcagagaggtgacggtggtggag
aaggcggacagctcgagtgtgctaccgagcccgctgagcgtgagcacgcgctcccgcacc
aacttcctcttcgccaacctgcgcgaccgcgccttcctgctgcagcgcatctccgagctg
ctgcgcagcagctccgccgtgggcaagcagcagggtgcggcggttgcccccacgccgacc
gcgggcacgccgtcctcccagcagggctcccagccgcagcccaacggcgctgacgctgga
tccgcggcagtctggcgtggatagtcagaacgaggggcaacacccagcaacgcaccccag
gagaccacggaggcgttgatgaccatgtttcaccgctcggacagccacaccattgacctc
aagcaggcgaaggagctgatgaaggaggagtcgtggagcatccactttgcggagtttggc
cgcggcgtgtgcatgtaccgcacggagcgcacacgcgacctcgtcatgcgcgggatccct
gagtcactgcgcggggaactctggatgcacttctctggcgcgatccacgagatgaactcg
tacccaggctactacgcggagctcgtgcgcagcagcatgggtcgcatgagcctcgtgacg
gacgagatcgagcgcgacctgcaccgctcgctacccgagcacccggccttccagtcagag
atgggcatcgccgcgctgcgccgtgtgctcactgcctacgcacaccgcaacccctccatc
ggatactgccaggccatgaacatcgtgacgtccgtgctgcttctgtacacgaaggaggag
gaggccttctggctgttggtggctctgtgtgaacgcatgctgcccgactactacaacacg
cgcgtcgtcggagcgcttgtggaccagggcgtgtttgaggagctgacacgggagcacctg
ccccagctgtgcgagcggatgcaggacctgggtgtcatctccaccatctccctgtcatgg
ttcctcacgctcttcctgtccgtgctgcccttctccagcgccgtctgtgtggtcgactgc
ttcatgctggacggggtgcgcatgatcttccagctggccctggccgtgctgcacgccaac
atgagcaagctgctgtcgtgccacgacgatggcgaggccatgaccatcctgggcagttac
ctggacagtgtcaccaacaaggacagcacgctgccaccgataacgcatctgcacgcgctg
ctgtccgagaacaccgagcctcagccggaagtggacatcttccagctcatccgcacgtct
tatgagaggttcggctgcatccgggctgaggtgatagagcagatgaggttcaggcaacgt
ctgagagtcatccagaccctcgaggacaccaccaagagaaacgttgttcgctccatcatg
actgagactcagttcactctggaagagctagaggaactctttgtgctcttcaagtgggag
cacctgcgcagctgttactggggaagtgccaccgccgccaccaccggcaatggtggcgct
ggtgttagcggcggcggcagcgatggcgacggcgggagcacggcggtgccggtcagcgag
cggcacgacccgagcctgccctacctagagcagtaccgtgtggatgcggcgcagctccac
tcgctgctcgcagcgctgtcgccgtgggtgcgggggccgcaccccccgccgctcgcgccg
cgcctctttcgcctgctcgacaccaaccgcgacggcctcatcaacttcaaggagtttgtg
agcgcgctcgggataatgtaccatggagacctgaccgagaagctgaaactcctctacaag
ttgcatcttcctccagctctcagtccctcggagcacgaggagacagagtcagcgctggaa
gccacgcgattcttctatgaggacatcacgccatgcaccccacagcacgtgggagtgccc
aagcgggcaggcgacgcttacagcgacctcgacattaacacccccgagcacagggcactg
tggcactctcgtgggatggtgagcgacgtggacgacgctcacctggcagagttgactgag
ggctccttgagtgtggacaacacacgcatagacaaaggcggagcagaggccagggactac
cgctactacctgcgcaagtgggcccaggagacggagctcaagaaggagagcatcaaggac
ttgcccaagatgaaccaggagcagttcatcctgctgtgcaagtccctgtattcgctgttc
gcggagcatccgcacgagcagcagctctaccactcgatcgccacggtggccagcctgctg
ctggagctcggcgaggtcggcaagcgcttcagccagcaccgcaaccgcaccgccggcaac
acagccaccgccggcaacgctgcctcctccggaaatgccgccgccaccgccgcgatgaac
ctcacggcgaacagtacagacgacagtatcgaccggatggtggacgaaatggcggaggaa
gtggcctcggcgtcggacgttgcgatcgggggcggccaggaagaggctccgtcgatgccg
cgcaaggacgagcgcgaccgcgcgtcgctcaacaacctcgttgtgtcggacgacgagttc
aactccaaggacgacacgtcggtgtcatcctactctgtcgtgagcgccggctccatcccc
tgctcagacgacggctgctcctctgacgacggcgctgtcgtgctggcggcacctaccgcc
gggggctcgcgccggtccagcggtaacggcgggggggaggctgcggccggcggctcctgc
cctcctcgagccgctcctgcagctgcaggcgcttcatcgtcgttggcagcaacggcggca
gcgtcgacgccgccgcggcggtcgccagctcgcgggcgccccgaccgcgagtgggccgtg
agcttcgagcagttcctggcgtcgtcattgacggaggctgcgctggtgtcgttctttgaa
gaaacgcctccgcccagcagcctcatggagcgcgtgcggtccgccaagacgggccgtgcc
atccccgagtgcccctcgccatccccgaccactgccgtcgacgccgtgaggtttcccggg
gatggccgggccatgtcgccagggcagggagagtccggtgacggcaaaacgccaggtcgc
ggaagccccggtgttgccgatcccttcgctgccagcctagcggtttag
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