Lethenteron reissneri (Far Eastern brook lamprey): 133347725
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Entry
133347725 CDS
T09663
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6-like
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03015
mRNA surveillance pathway
lrj03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133347725
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
133347725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrj03019
]
133347725
Messenger RNA biogenesis [BR:
lrj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
133347725
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Gene cluster
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
133347725
NCBI-ProteinID:
XP_061416227
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Position
26:17026365..17043405
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AA seq
658 aa
AA seq
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MADGVDHIDIYADVGEEFNQEQEYSGHDNVDLYDDVIVPTASNGEEADEADFQDSLTPLD
QPGKHTTTVALAGDRRLGYIYNGKRVALYVGNLTWWTTDEDLVNALQAIGVTDIQEIKFY
ENRANGQSKGFALVSVSLEASYRKVMDLLPKRELHGQNPIISPCNRQSLNQLEMQSRGPS
GQMSGEGRAGPPGSGPRGSPFPPPPVGPGGGGVRGRFPSPGPGPVGPNMDRPFPGHPGPP
PGGPPPFQVQGPPRGMPPGPPGPIGPPMPVHGPPPMGLVGPPPRADRPPPPVVFPGQPFP
HPNHPHPHQHPHPLQHPHPHQHPHPHPQQFHGEPPRGLPLPLHPHGVPPMGPGGFGPMPP
GPPQQGPPPPPPPHPHGHPHQPPPGLMPPRPGPPLPPPPSSSAPPGHPPGPPPHMGLLPP
PGLPPPAPHVNPAFFPPGNHSGGGGGGGGGGGGGGGGAGNNVGPPGGDPRGPPPPEGYGQ
PPQFERGDFRKQEFGRTPSPSLGYRFHTEMEPANNSLSEVEFEEIMNRNRAISSSAISRA
VSDASAGEYGSAIETLVTAISLIKQSKVSSDERCKVLVSSLQDCLHGIESKSYGSGGRKR
ERSRERDHSRSREKSRRHKERSRSRDRHEEYYRERSRERDRHRDRDRDREREREYRHR
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggcgtggaccatatagacatctacgccgacgtcggggaggagtttaaccag
gagcaggagtacagcggccacgacaacgttgacctttacgacgacgtgatcgtcccgacc
gcgagcaacggcgaggaggcagacgaggctgacttccaggactctctgaccccgctcgac
cagccggggaaacacaccaccaccgtcgcccttgccggggaccgccgtctaggctatatc
tataacggcaagcgcgtggctctgtatgtaggcaatctcacctggtggacaaccgacgag
gacctcgtgaatgccctgcaagcgattggcgtcaccgacattcaagagatcaagttctat
gagaacagagccaacggacagtctaaagggtttgcgttggtgagcgtgagcctggaggcc
tcgtaccgcaaggtgatggaccttctgcccaagcgcgagctccacggacagaaccccatc
atctccccgtgcaaccgccagtctctcaaccaactcgagatgcagtctcgtgggccaagt
gggcagatgtccggggagggccgtgctggtcccccaggcagcggccctcgcgggtctccc
ttccctcccccgcccgttgggcctggcggcggtggtgtgagaggccgctttccttcgccg
ggcccaggtcccgttgggcccaacatggacaggccattccctggtcaccctgggcctcct
cctggaggacccccgccattccaagtgcagggccccccccgcgggatgccccctggccct
cctggacccatcggtccccccatgcccgtgcatggcccgcctcccatgggcctcgtgggc
cccccgcctcgggccgaccgccccccaccgcccgtagtctttcccgggcagcctttcccc
cacccaaatcacccccaccctcaccaacacccccacccccttcagcacccccaccctcac
cagcacccccaccctcacccacagcagttccacggggagcccccccgcgggctaccgctc
ccacttcacccccatggcgtaccccccatgggcccagggggcttcgggccaatgccgcct
ggcccccctcaacaggggcccccaccgccacccccgccccacccacacgggcaccctcac
cagcctcccccaggcctcatgccccccagaccgggacctccgttgcccccgcctccctcc
tcatcggctcccccggggcacccgccggggccgcccccccacatggggctgctgcccccg
ccggggctgccccctcccgcgccgcacgtcaaccctgccttcttcccgcccggcaaccac
agcggcggtggtggcggtggtggcggcggcggtggtggtggcggtggaggtgctgggaac
aacgttgggcctcccgggggtgacccgagaggccccccgccccccgaggggtacgggcag
cccccacaatttgagcgaggagattttcgcaagcaagagtttggacgcacgccctcgcca
tctttggggtaccgctttcacacggaaatggagccagcgaacaacagcctgagcgaggtc
gagtttgaggagatcatgaatcgcaaccgagccatctcgagcagcgcgatctcccgcgcc
gtgtccgatgccagcgcaggcgagtacggtagcgccatcgagaccctcgtcacggccatc
tcgctcatcaagcagtcgaaggtgtcgagcgacgagcgctgcaaggtgctcgtaagctcg
ctgcaggactgcctgcacggcatcgagtccaagtcgtatggctccggagggaggaaacgc
gagaggtcgcgtgagcgcgatcacagccgttcgcgagagaagagccggcggcacaaagag
cgatcgcgtagccgcgaccggcacgaggagtactaccgggagcggagccgcgagcgagat
cgccaccgcgaccgcgacagggaccgtgaacgcgagcgcgagtaccggcaccgctga
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