Lethenteron reissneri (Far Eastern brook lamprey): 133347727
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Entry
133347727 CDS
T09663
Symbol
COPB1
Name
(RefSeq) coatomer subunit beta isoform X1
KO
K17301
coatomer subunit beta
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrj04131
]
133347727 (COPB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lrj04147
]
133347727 (COPB1)
Membrane trafficking [BR:
lrj04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
133347727 (COPB1)
Exosome [BR:
lrj04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
133347727 (COPB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatamer_beta_C
Coatomer_b_Cpla
HEAT_2
HEAT
Cnd1
HEAT_EZ
Arm
Motif
Other DBs
NCBI-GeneID:
133347727
NCBI-ProteinID:
XP_061416230
LinkDB
All DBs
Position
26:complement(17141689..17161475)
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AA seq
957 aa
AA seq
DB search
MTAAENVCYTLINIPSDSEPPTEISLKNDLEKGDIRAKTEALKKVIVMILSGDKLPGLLM
TIIRFVLPLQDHTLKKLLLVFWEIVPKTTPDGKLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKEAELLEPLMPAIRTCLEHRHNYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPT
ERARFIRCIYNLLQSSSPAVRYEAAGTLVTLSSAPTAVKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKDHPSHERVLQDLVMDILRVLGTPDLEVRRKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVTEHEDTDKFRQLLVRTLHSCSVRFPDVAASIIPVLMEFLSDTNELAAGDV
LVFVREAVQLFESLRPLIIEKMLEVFHSIKAVKIQRGALWILGEYCNSKEDIQSVMTEVR
RSIGEIPIVETEIKKAAGENKIDEEVSMVPAQKLVTEMGTYATQSALSTARPSKKEEERP
PLRGFLLEGDFYVGAAMATTLTKLALRYIALVDDKRKQNSFVAEAMLLMSSVLHLGRSSL
PKKPITEDDVDRIALCLRVLSELSPLLSDIFNKECRRSLSNMLSAKLEEEKRSLKKESEK
RTVSVQADDPITFMQLMAKSENSSKEDQFQLSLLAATGHSQKKEAADPLSSKLSKVTQLT
GFSDPVYAEAYIHINQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPY
DFANIKANVKVASTENGIIFGNIVYDVTGAASDRNCVVLNDIHIDIMDYIQPATCSDAEF
RQMWAEFEWENKVTVSTNILDLMEYLKHILKSTNMKCLTPEKFSPQALLGNCGFMAANLY
ARSIFGEDALANVSIEKPTHLGPDASVTGHIRIRAKSQGMALSLGDKINLSQKKAAV
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgacggccgccgagaatgtgtgctacacgctcatcaacatccccagtgactcagagcct
cccactgagatcagcctcaagaatgacttggagaagggtgatatccgtgccaagacagag
gcgctgaagaaggtgattgtgatgatcctgagcggcgataagttgccggggctactcatg
acaatcatccgcttcgtgctgcctctgcaagaccacacactgaagaagttgctgcttgtc
ttctgggagattgtgcccaagacgacgcccgatggcaagctgctgcaagagatgatcctt
gtgtgcgatgcctacaggaaggacctgcagcatcccaacgagttcatccgtggctccact
ctgcgtttcctgtgcaagctgaaggaggcggagctgctggagccgctcatgccggcgatc
cgcacgtgcctggagcaccggcacaactacgtgcggcgcaacgccgtgctcgccatctac
accatttaccgaaactttgagcacctgatcccggacgccccggagctgatccacgacttc
ctggtgaacgagaaggatgcgagctgcaagcgcaacgccttcatgatgctcatccacgcc
gaccaggatcgtgccctggactatctgagcacctgcatcgaccaagtgcagacgtttggc
gacatcctgcaactcgtcattgttgagctcatttacaaggtgtgccacgccaaccccaca
gagcgcgcccgcttcatccgctgcatctacaacctgctgcagtcgtcgagccccgcggtg
cggtacgaggcggcggggacgctcgtcacgctctccagcgcccccaccgccgtcaaggcg
gcggcccagtgctacattgacctcatcatcaaggagagtgacaacaacgtgaagctcatt
gtgctcgatcgcctcatcgagctgaaggaccacccgagccacgagcgagtgcttcaggac
ctggtgatggacatcctgcgtgtgctgggaactcccgatctggaggtgcgcaggaagact
ctgcagctcgcgctggacctggtgtcctcgcgcaacgtcgaggagctggtgatcgtgcta
aagaaggaggtgatcaagaccaacaacgtgacggagcacgaggacacggacaagttccgc
cagctcctcgtgcggacactacactcgtgcagcgtgcgcttcccggacgtggctgccagc
attatccccgtgctgatggagttcctgagcgacactaatgagctggcggcgggcgacgtg
ctggtgttcgtgcgggaggccgtgcagctcttcgagagcctgcggccgctcatcatcgaa
aagatgctcgaggtcttccactccatcaaggctgtcaagatccagcgtggggcgctgtgg
atcctaggcgagtactgcaactctaaggaagacatccagagtgtcatgacggaggtgcgc
cgctccatcggagagatccccattgtggagacggagatcaagaaggccgcgggtgaaaac
aagattgacgaagaggtgtcgatggtgcccgcgcagaagctcgtcaccgagatgggcacc
tatgccacgcagagcgctctcagcacggctcgtccttccaagaaggaggaggagaggcca
cccctgcgcgggttcctcttggaaggagatttctacgtgggtgcagccatggccaccacc
ctcaccaagctggccctgcgctacatcgcgctggtggacgacaagcgcaagcagaattca
tttgtggcagaggcgatgctgctcatgtcaagcgtgctgcacctgggccgctcgtcgctg
ccgaagaagccgatcaccgaggacgacgtggaccgcattgcactgtgcctgcgtgtgctg
tccgagctctcgccgctgctctccgacatcttcaacaaggagtgccgtcgctcgctctcc
aacatgctctctgccaagctggaggaggagaagcgatcgctcaagaaggagagtgagaaa
cgcacggtgagcgtgcaggccgacgacccgatcacattcatgcagctcatggccaagagc
gagaactcctctaaggaggaccagttccaactgagcctgctggctgccacgggccactcg
cagaagaaggaggccgccgaccccctctcctccaagctcagcaaggtgacgcagctgacg
ggcttctcggatcctgtgtatgccgaggcgtacatccacatcaaccagtacgacatcgtg
ctggacgtgctggtggtgaaccagacgagcgacaccctgcagaactgcacgctggaactc
gccaccctcggggacctgaagctggtggagaagccgtcgccgctcacgctggctccctac
gactttgccaacattaaggccaacgtgaaggtggcctccaccgagaacggcatcatcttc
ggcaacattgtgtacgacgtgacgggcgcggcgagtgacaggaactgcgtcgtcctcaac
gacattcacatcgacatcatggactacatccagcccgccacttgctctgatgccgagttc
cggcagatgtgggccgagttcgagtgggagaataaggtcaccgtgagcaccaacatcctc
gacctcatggaatacctgaagcacatcctcaagtccaccaacatgaaatgcctcactcca
gaaaagttttcgccgcaggcactgcttgggaactgtggcttcatggcggcgaacctgtac
gcacgttccatcttcggggaggacgcgctcgcgaacgtgagcattgagaagcccacgcac
ctgggccccgacgcctccgtcaccggacacatccgcattcgtgccaaaagccagggcatg
gcactcagcctgggagacaagattaacctgtcccagaagaaagctgctgtgtga
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