Lethenteron reissneri (Far Eastern brook lamprey): 133347995
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Entry
133347995 CDS
T09663
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrj03041
]
133347995
Enzymes [BR:
lrj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133347995
Spliceosome [BR:
lrj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
133347995
BRITE hierarchy
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
133347995
NCBI-ProteinID:
XP_061416767
LinkDB
All DBs
Position
26:complement(15416048..15425717)
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AA seq
694 aa
AA seq
DB search
MPGYSDRDRGDRDRGRDRWGRDSSPRFGSSRGFGGGDRGGGGGGGMRKFGQPGEKLRKVK
WDMSKLPRFEKNFYVESPNVVRRSQHEVDEYRRKKEITVKGQSCPKPVFNFEEASFPSYV
MDVIKQLNFKEPTPIQAQGWPLALSGQDMVGIAMTGSGKTLAYLLPAIVHINHQPFLERG
DGPVVLVLAPTRELAQQVQQVAQDYGRLSRIKSTCVYGGAPKGPQLRDLERGVEICIATP
GRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRTIVDQIRPDRQTLMWSATWPRE
VRQLAEDFLKSYIQINVGSIELSANHNILQIVDVCMDSEKDSKLIRLMEEIMAEKENKTI
IFVETKRRVDDLTRRMRRDGWPAMCIHGDKSQPERDWVLSEFRTGKAPILIATDVASRGL
DVEDIKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPSNLRQANDLVNVLREANQ
AINPKLLELAGGARGGKGRSRYRGGGGGGGSYRDDSDDDRRDRFGSRFGSGRDRDRDRGG
RDRDSGSSRDRGYGLSGGNRDSGSNRDADSNNSQSQMLQKSLLGLAPQGGLSLIGQPGLL
GLIPSFSAARDGKLAQVGGDQSSQQSAQQQQQFLTASTPQISTLLAQQYSQYQSPMPLMS
LNFIPDLNQANFCLPANGVVPPPPPPPPPPGVKN
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgccggggtacagcgatagggatcgcggcgatagagatcgcggccgcgacaggtggggt
cgtgattccagcccgcgcttcggcagcagccgcgggttcggtgggggtgaccgcggtggt
ggtggcggcggcggcatgaggaaattcgggcagcctggcgaaaagctgcgcaaggtcaag
tgggatatgagcaaactcccacgctttgagaagaacttctacgtggagagtcccaacgtg
gtacgccggagccagcatgaggtggatgaatacaggcggaagaaggagatcacagtcaaa
gggcagagctgtcccaaaccggttttcaatttcgaggaggccagcttcccttcctacgtg
atggacgtcataaagcagctgaactttaaggagcccaccccgatccaggcacagggatgg
cccttggcgttgagcgggcaggacatggttggcatcgccatgacgggctcaggaaagacc
ctggcttatttgcttccagccatcgtgcacattaaccaccagcccttcctggagcgtggc
gatggcccagtggtgctggtgctggcaccaacgcgtgagctggcacagcaggtgcagcag
gtcgcgcaggactacggccgattgtcacgcatcaagtccacgtgcgtgtacggcggagcc
ccaaagggcccacagctgcgcgaccttgagagaggagttgagatctgcatcgccaccccg
gggcgcctcattgacttcctggagtcgggcaagacgaacctacggcgctgcacctacctg
gtgctggatgaggccgatcgcatgttggacatgggcttcgagccacagatccgcaccatc
gtcgaccagatccggccggaccggcagacactcatgtggagcgccacgtggccccgggag
gtacgacaacttgcagaggacttcctgaagagctacatccagatcaacgtgggctccatt
gagctatcggccaaccacaacatcctgcagattgtcgacgtgtgcatggacagcgagaaa
gacagcaagctgatccgcctgatggaggagatcatggcagagaaggaaaacaagacgatc
atctttgtggagactaaacggcgtgtggatgacctgacacggaggatgaggcgcgacgga
tggccggcaatgtgcattcatggagacaaaagtcagccggagcgagattgggttctgagt
gaatttcgcactggcaaggcccccatcctcattgcgactgatgttgcttccagaggacta
gacgtggaagacatcaaatttgtcatcaattacgactacccaaactcgtcggaggactat
gtacaccgcataggccgcacagctcgcagcaccaacaagggcactgcctacaccttcttt
actccatccaacctccgccaggccaacgacctggtgaacgtcctacgagaggccaaccag
gccatcaaccccaagctgctagagctggctggtggggcccgtggaggcaaaggtcgctcc
cggtaccgtggtggtggtggaggtggcggcagttaccgcgatgacagcgatgacgatcga
cgtgaccgcttcggtagtcgctttggctccggccgagatcgcgaccgagaccgtggtggt
cgggaccgcgatagcgggagcagtcgggatcgtgggtacgggttatcgggagggaacaga
gactctggctcgaaccgagatgctgacagtaacaacagccagagccagatgctgcaaaaa
agcctgcttgggttagcaccacaaggtggtctatccctaataggccagccaggtctcctg
ggactgatcccttctttctctgctgccagggacggtaagttggcccaggtgggtggggac
caaagctcgcagcagtcagcgcagcagcagcagcagtttcttacagcgagcacgccccaa
atctcaaccctccttgcgcagcagtacagccagtaccagtcacccatgccgctcatgagc
ctcaactttattcctgacttaaaccaggctaacttctgtttgcctgcgaatggtgttgtg
ccccctcctcccccaccccctcctcccccaggagttaaaaattga
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