Lethenteron reissneri (Far Eastern brook lamprey): 133348038
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Entry
133348038 CDS
T09663
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair and recombination protein RAD54B-like
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
133348038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrj03400
]
133348038
DNA repair and recombination proteins [BR:
lrj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
133348038
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SWI2_SNF2
ZGRF1-like_N
Motif
Other DBs
NCBI-GeneID:
133348038
NCBI-ProteinID:
XP_061416857
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Position
3:complement(14942882..14958124)
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AA seq
879 aa
AA seq
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MYLFSADVEADLIKRPEAARTFLVPRKHXYNSLTPKSPAAMKVQRSEEQNDHTAENNPMK
DNGDCSATKYYSVMWGKASKKKHKKWEGDAVLITSGRLVNLKDMEGKDICKGTGYNKREL
ESLSEGHTLVISGKEIEVMGLISCEDYANGRCFQVSGASCDSAASIATPNKAARPYASPF
RAVTGAPEKSRVTETKVYKPRFNPFAPNALVMPQPSPAHQWQNNAAGLPMGDVVVDPHLV
VHLRPHQREGVVFLYEAVMGMRSPAVQGAILADEMGLGXTLQCIALVWTLLRQGPYGNRP
SLHKVLIVTPGSLVRNWSREFNKWLGVERIRVFTVDQEHKVEEFMKSPIYPVLIISYEMV
LRCIDAVRVIPFGLVICDEGHRLKNSSIKTASAIDSLPCKRRILLTGTPIQNDLQEFYSI
VEFVNPGILGSAAAFRKVFEEPIVQSHQPSASLEDKQLGETRAAELQRLTGLFVLRRTQE
INERYLPPKREFVVMCRPTPLQIQLYRRLLASPAVRSCLNRVTTDRSPHLVCISALKKLC
NDPCLLYKTLQKAEALRKGQKKQDTEEESDVSLYDGLYEEFSLIYNPESTSKLESGKLRV
LARLLEAMHQKTPVERVVLVSNSTQMLDVLARCCSSWGYSWARLDGTTPVSQRQHLLENF
NSRFSTHSVFLLSSKAGGVGLNLVGASRLVLYDIDWNPANDIQAMARVWRDGQHKTVHIY
RFLTTGTIEEKIYQRQVSKQGLSGSVVDAASSARSEHIRFSLEELRNLFTLHEGTCCFTH
DLLGCPCQGDGGILSGANKDSLVERTCQLGRARNSSSSAQRSTKALSMAELMEWHHLSST
GLSSLPDPDLYQAADDITFVMHNETKLCSETTALTDSVP
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgtatctgttttctgcagatgtcgaagcagatcttatcaaaaggcccgaggcagcaagg
accttcttggtgccaagaaaacacnactacaattctcttaccccaaaatcacctgctgca
atgaaagtgcagcgttccgaggaacagaatgaccacactgcagagaacaatccaatgaaa
gataacggggattgttccgctacaaagtactacagtgtaatgtggggtaaagcatccaag
aagaagcacaagaagtgggagggcgatgctgttctgatcacaagtggccgattggtgaac
cttaaagacatggaaggcaaggacatctgcaaaggtacaggctacaacaagcgtgagctg
gagagcctgtcggagggacatactttggtgatcagcggaaaggagatcgaggtgatgggg
ttgatttcgtgtgaagattacgcaaacggaaggtgcttccaggtctccggcgccagctgc
gactcggccgcttctattgccactccgaacaaggctgctaggccctatgcgagccccttc
cgggccgtcacaggagcaccagagaagtcccgcgtcaccgagacaaaagtctacaagcct
cgctttaacccctttgctccaaatgcacttgtgatgccccagccaagtcctgcccatcag
tggcagaacaatgcggccggcctgcccatgggagacgtcgtggtcgacccccacctcgtc
gtgcacctaaggccacaccagcgagaaggggtcgtttttctttacgaggccgtcatgggc
atgaggtctcctgctgttcagggagccatcttggccgatgagatgggcctggggnagacc
ctgcagtgcattgcgctcgtgtggacgctgttgcggcagggcccgtacggcaatcggccc
tccctacacaaggtgctgatcgtcactcccggaagcctggtgcgcaactggagccgtgaa
tttaacaagtggctgggcgtggagagaatccgcgtcttcaccgttgaccaggaacacaag
gtggaggagttcatgaagtcgcccatctacccggtgctcatcatcagctacgaaatggtg
ctgcgctgcatcgatgctgtgcgcgttatccccttcggcctcgtcatctgtgacgagggt
caccgcctcaagaacagcagcatcaaaacggcgtcggccatcgacagcctgccctgcaag
cgacgcatcctcctcacgggtacgcccattcagaatgacctgcaggagttttattccatc
gtggagtttgtgaaccctgggatactgggctccgcggcagccttccggaaggtgtttgag
gaacccatagtccagtcacaccagccctctgcctccctggaggataagcagctgggggag
acgcgcgctgccgagctgcagcggttgacgggcctctttgtgctgcggcgcacgcaagag
atcaacgagcgctacctgccgcccaagcgggagtttgtggtgatgtgccgacccacgcca
ctgcagattcagctctaccgcaggcttctggcgtctccggccgtgcggagctgtctgaac
cgcgtgaccaccgaccgtagccctcacctcgtgtgcatcagcgctctcaagaagctttgc
aatgatccttgcctcctgtacaagacgctgcagaaagcagaagctctccgtaaggggcag
aaaaagcaagacaccgaggaagagtcggatgtgtctctatacgacggactttacgaggag
ttctctttgatctacaacccagagagcaccagcaaactagagtcggggaagctgcgcgtg
ctagctcggctgctggaggccatgcatcaaaaaacacccgttgagcgggtggtactggta
agcaactccacccagatgctcgacgtcctggctcgctgctgttcaagctggggctacagc
tgggcgcgactggacggcacaacgcccgtgtcccaacgacagcatcttctggagaacttc
aacagccgcttctccacgcactccgtattcctgttgagctccaaggccggaggcgtgggc
ctcaacctcgtcggagcttcccgcctcgtcctctatgacatcgactggaaccctgccaat
gacatccaggccatggccagggtatggcgtgatggacagcacaagaccgtgcatatttac
aggtttctgaccacaggaactatcgaggagaagatttaccagcgccaggtgagcaagcag
ggcctgtccggcagcgtggtggatgcggcgtcgtcggcgcgctcggagcacatccgcttc
tcgctggaggaactgcgcaacctgttcacgctgcacgaggggacttgctgcttcacgcat
gacctcctgggctgcccttgtcaaggagatggcggaatcttgtctggagcaaataaagac
agcctggtggagcgtacatgtcagctgggccgggcgagaaactcttcttcgtcggctcag
cgcagcaccaaggctttatccatggccgagctgatggagtggcatcatttatcttctact
ggactaagttcactgcccgacccagacctgtaccaggcggcagatgacattacgtttgtc
atgcacaatgaaaccaagctttgctcggaaaccacagcgctcactgacagtgtaccatga
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