Lethenteron reissneri (Far Eastern brook lamprey): 133348282
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Entry
133348282 CDS
T09663
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 1-like
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lrj03036
]
133348282
Chromosome and associated proteins [BR:
lrj03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
133348282
BRITE hierarchy
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
LIG3_BRCT
BRCT
DEAD
DUF6187
Motif
Other DBs
NCBI-GeneID:
133348282
NCBI-ProteinID:
XP_061416996
LinkDB
All DBs
Position
27:1549833..1557644
Genome browser
AA seq
1009 aa
AA seq
DB search
MKRMCQRAGRHDEEEEEGGGGDDDDDNEGKQQEEEDEEISIIVYLGDIEKRGKLQEKIKS
GGFHILLTTYELCLKDAAFLGSLPWSVLVVDEGHRLKSQSSLLHQALLEFDIGQRVLLTG
TPVQNNLAELYSLLSFVSAGTFAPEGLRAFVQRFAGVGSDPERASELGDLLGPFVLRRLK
TEVAAELPAKTELVLYHGVSALQKQYYRAILSRDLDALEDPTTGARVRLMNILMQLRKCV
DHPYLFNGAEPEPFVEGEHLVSASGKLLALDRILALLRREGHRALIFSQMTRMLDILQDF
LEFRGYSYERLDGSVRGEERHLAIKSFGQKDIFVFLLSTRAGGVGLNLTAADTVVFVDSD
FNPQNDAQAAARAHRIGQTRPVKVIRLIGRSTVEEVIYRRAGAKLRLTHAVTAQMREDSD
SNDMKDESPKQLSEILLAGLGTLMESDEGSSVEMDLQAILGESRDGCWVIKEPPAEGVDA
PPRRGALRRQTEDDRRILESADYLRAPASSSDLTALSLLRQDMNSRAGGAGGSSQSSAAL
ALPVRRERLPLTEEERAKRKERRRQLDRERDRALAAKRARMDVERQRKKLALWKEAGYES
LNVALRGEGAASDDASGSDEDVEGGASDEEEDEEGEGGQIRYVLGDVTLPDAPAGRNAIV
VHCVDNSGRWGHGGLFSALDKRSTQPKRHYARAGKMGDLALGDAHLIPVDDRVSRAGGVD
TLALVVAQSRDPNNVLSGISLAALETGLRRVRRAARRLRAGVHLPRIGHATPGFNWYATE
RLVRKHLVSRGVPTYIYYHPRRTRQGAAASAARPSSTPKPAAFASSAASTTSVASAQTAA
QSAATHKPGPSVSACIKPASAAALSPSSSSSSSSLTRPPPLSSSSSPSLAAGPGDPNAAG
SPTGQSDSWSLGFPDFMSGVRARFLGLPEAEVARLARYLVTFDGDVSAGVDADTTHLVTA
GREPGSGDAETLREAVRRRPDLTVVTAAWLRACFSAREKLPCAPFVVDV
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggatgtgccagcgggcaggccgccacgacgaggaggaggaggaggggggaggt
ggcgacgatgacgacgacaacgaggggaagcagcaggaggaggaggatgaggagatctcc
ataatcgtgtacttgggggacatcgagaaacggggcaagctgcaggagaagatcaaatcg
ggaggattccacatcctgctcaccacctacgagctgtgcctcaaggacgcggccttcctc
ggcagcctgccgtggtccgtcctggtggtggacgagggccaccgcctcaagtcgcagagc
tcgctgctgcatcaggcgctgctcgagttcgacatcgggcagcgcgtcctgctcacgggc
acgcccgtccagaacaacctggcggagctctactccctgctcagcttcgtgtcggcgggc
accttcgcgcccgagggcctgcgggccttcgtgcagcgcttcgcgggcgtcggcagcgac
cccgagcgcgcctcggagctgggcgacctcctgggccccttcgtgctgcgccgcctcaag
acggaggtggcggccgagctgcccgcgaagacggagctggtgctctaccacggcgtgtcg
gcgctgcagaagcagtactaccgcgccatcctgtcgcgcgacctcgacgccctggaggac
cccacgacgggcgcgcgcgtcaggctcatgaacatcctcatgcagctgcgcaagtgcgtc
gaccacccctacctgttcaacggcgccgaacccgagcccttcgtggagggcgagcacctg
gtgagcgccagcggcaagctgctggcgctcgaccgcatcctggcgctgctgcgccgcgag
ggccaccgcgcgctcatcttctcgcagatgacgcgcatgctcgacatcctgcaggacttc
ctcgagtttcgcggctacagctacgagcgcctggacggctccgtgcgcggcgaggagcga
cacctggccatcaagtcgttcggccagaaggacatcttcgtcttcctgctgagcacgcgc
gccggcggcgtcggcctgaacctcacggccgccgacacggtcgtcttcgtggacagcgac
ttcaacccgcagaacgacgcgcaggcggccgcacgggcccaccgcatcgggcagacgcgg
ccggtgaaggtgatccggctcatcgggcgcagcaccgtggaggaggtgatataccggcgg
gcaggagccaagctgcggctcacgcacgccgtgacggcgcagatgagggaggacagcgat
tccaacgacatgaaggacgagtctccgaagcagttgtcggaaatcctgctggccggcctc
gggacgctgatggagtcggacgagggctcctccgtggagatggacctacaggccattctg
ggagagagccgcgacgggtgctgggtgatcaaggagccgcccgcggaaggcgtggacgct
cctccgcggaggggcgcgctccgtcggcagacggaagatgaccggcgcattctggagagc
gcggattacttgagggcgcccgccagctcgtccgacctcaccgccctgtcgctgctgcgt
caggatatgaacagccgggcgggcggcgccgggggttcgtcgcagagttcggcggcgctg
gccctgcctgtccggcgcgagcggttgccgctcacggaggaagagcgagccaagaggaag
gagcggcgccggcagctggacagggagcgcgaccgcgccctggccgcgaagagggcccgc
atggacgtggagcgtcagcgcaagaagctggcgctctggaaggaggccggctacgagtcg
ctcaacgtggcgctgcgcggggagggcgccgcgtcggacgacgcaagcggaagcgacgaa
gacgtcgagggtggcgcttcggacgaggaggaggacgaagagggggagggggggcagatc
cgctacgtcctgggcgacgtgacgctgcccgacgcccccgcggggcgcaatgccatcgtg
gtgcactgcgtggacaactcgggccgctggggccacgggggcctcttttccgcgctcgac
aagaggtcgacgcagcccaagcgccactacgcgcgcgccggcaagatgggagacctggcg
ctcggggacgcgcacctcattcccgtggacgaccgcgtgagccgcgccggcggcgtcgac
acgctggccctcgtcgtggcccagagccgcgacccgaacaacgtcctgtcggggatctcg
ctggcggccctggagacgggcctcaggcgcgtgcggcgagcggcacgcaggctccgcgcc
ggcgtccacctgccgaggatcgggcacgcgacgccgggcttcaactggtatgccacggag
aggctcgtccgcaagcacctggtgtcgcgcggcgttcccacgtacatctactaccacccg
aggaggactcgccaaggggctgctgcgtccgccgcccggccttcctccacgcccaaaccc
gcagccttcgcctcatccgcggcctccacgacctctgtggcctccgcccaaacggcggcg
caatccgcggcgacccacaagccgggccccagcgtgtccgcctgcatcaaaccggcttca
gctgccgccctctctccatcctcttcctcatcctcctcctcgttgacccgtcctcctcct
ctgtcgtcgtcgtcgtcaccgtctctcgcggccggtcccggcgacccgaacgcggccggt
tcaccgacggggcagtcggactcctggtcgctggggttcccggacttcatgtcgggggtg
cgcgcgcgcttcctcgggctccccgaggcagaggtggcgcgcctcgcccgctacctcgtc
acgttcgacggcgacgtgagcgccggcgtggacgccgacaccacgcacctggtgacggcg
gggcgggagcccggctccggcgacgccgagacgctgcgggaggcggtgcgccggcggccc
gacctcaccgtggtgacggccgcgtggctccgggcctgcttctccgctcgcgagaagctg
ccctgcgctccgttcgtcgttgacgtttaa
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