Lethenteron reissneri (Far Eastern brook lamprey): 133348289
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Entry
133348289 CDS
T09663
Name
(RefSeq) pseudouridylate synthase 1 homolog isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lrj03016
]
133348289
Enzymes [BR:
lrj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
133348289
Transfer RNA biogenesis [BR:
lrj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
133348289
Prokaryotic type
133348289
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
133348289
NCBI-ProteinID:
XP_061417009
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All DBs
Position
27:1455589..1464211
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AA seq
532 aa
AA seq
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MRQASLVSLRWCLHLGAFLRPPPPPSLLLLLRGHAAVRMATPCSATLAPSPPPPRPHTSS
PPLAPDCGRDAVAMEKNGEARGPDGKGDSQGPQEKGASRGLHGNGHGRGPAPRLLLQEEE
AQSRRGPETNGEAPGPAENGDSSQGVQQQKEGGGSADSEGSPVAKRARLEGGPEVARKKF
PKKKVALLVAYSGKGYHGMQRNAGNAAYRTIEDELVEALVRAGCIPDNHAADMRKMSFQR
CARTDKGVSAIGQVVSLKMWLIDDVVNKINAHLPQQIRIMGMQRVTNGFNSKQLCDARTY
IYLLPSFTFGPKGQGEWDGEGERDTAWEESFRLPEETLSHVNALLRRYVGTHNFHNFTSG
KGAQEASARRYVTEAYCQPPSLQHGIEFALIRIRGQSFMLHQIRKMVGLVVAVARGHAGD
QRMQDAFANDKLDVPKAPGLGLVLERVHYDRYDSRYAGDGVHAALAWPELAPALTEFAER
HVHAGIVAAEREEGSMRRWLGTLDKHDFTSSLARAVHSQVKREDSDGNSESE
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgcggcaggcatcgctggtgtcgctgcgctggtgtctgcacctcggcgcgttcctccgt
ccaccgccaccaccgtcgttgctgctgctgctgcgaggacacgcggcggtccgcatggcc
acgccgtgctccgcaactctcgccccttcccctcctcctcctcgtccccacacctccagc
ccgcctctcgcccctgactgtggccgcgacgcggtcgctatggagaagaacggcgaagca
cgcggccccgacgggaaaggggacagccagggcccccaggaaaagggggcctcgaggggt
cttcacggcaacgggcacggcaggggcccggccccccgtctcctcctgcaggaggaggag
gcacagagtcgaaggggccccgaaactaacggggaggcgccgggccccgcggagaacggg
gacagcagccagggggtgcagcagcagaaggaaggggggggttcagcggactccgagggg
tcgcctgtggccaagagggcccggctcgaggggggccccgaggtagcgaggaagaagttc
cccaagaagaaggtggcgctgctcgtggcctactcgggcaagggctaccacggcatgcag
cggaacgcagggaacgcggcgtaccgcaccatcgaggacgagctggtggaggcgctggtg
cgggccgggtgcatccctgacaaccacgccgccgacatgcgcaagatgtccttccagcgc
tgtgcgcgcacggacaagggtgtttcagccattgggcaggtggtgtccctcaaaatgtgg
ctcatcgacgatgttgtgaacaagatcaacgcccacttgccccagcagatccgcatcatg
ggcatgcagagggttacgaacggattcaactcgaagcagctttgcgacgcgcgcacctac
atctacctcctgcccagcttcacgtttgggcccaagggacagggcgagtgggacggggag
ggggagcgggacacggcgtgggaggagagcttccggctgccggaggagacgctgtcgcac
gtgaacgcgctgctgcggcgctacgtgggaactcacaacttccacaacttcacgtcgggc
aagggcgcccaggaggcgagcgcacggcgctacgtgacagaagcgtactgccagccgccg
tcgctgcaacatgggatcgagtttgcgctcattcgaatcagaggccagagcttcatgctg
caccagatccgcaagatggtggggctggtggtggcggtggcgcggggccacgccggcgac
cagcgcatgcaggacgccttcgccaacgacaagctcgacgtaccgaaagcgccggggctc
gggctggtgctcgagcgcgtgcactacgaccgctacgattcgcgctacgcgggcgacggc
gtgcacgcggcgctcgcctggcccgagctggcgccggcgctgaccgagttcgccgagcgc
cacgtgcacgcggggatcgtggcggcggagcgcgaggagggcagcatgcggcgctggctc
ggcacgctggacaagcacgacttcacgagcagcctcgcgcgcgccgtacacagccaggtg
aaaagagaagattcggacggcaacagcgaatcggagtga
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