Lethenteron reissneri (Far Eastern brook lamprey): 133348313
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Entry
133348313 CDS
T09663
Name
(RefSeq) tuftelin-interacting protein 11-like isoform X1
KO
K13103
tuftelin-interacting protein 11
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrj03041
]
133348313
Spliceosome [BR:
lrj03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
133348313
Other components
Complex C specific factors
133348313
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Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
betaPIX_CC
Motif
Other DBs
NCBI-GeneID:
133348313
NCBI-ProteinID:
XP_061417036
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Position
27:2213477..2227738
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AA seq
880 aa
AA seq
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MSMSHLYGRDEDVNVERFEVTDWDLENEFNPERVRHRQSKEEAVYGVWAEDDDDDDERPG
FSGGRSKNRDFTAPVSFVSGGVKRPAAEEEEDEDDDEEAASGKGSGGEEDGARLGPWNEA
LQRAKGGRGARQSQKGGIRPSRTVAGLPPEKGFGSWERHTKGIGQKLLQKMGYVPGLGLG
KNAQGIVLPVEAKVRKGRGAIGAHGPERTKQSLRDFPAPKSDEEEEEEFKQQLSQWRKEP
GTGAGATKKGPRYTYRTVEELKAKGLGRKVAPPSQLSQVKVIDLTGKSQKVYYSYDQMSQ
RHSVPSDEAEAAEGEAASPSESKRKGFALPELEHNLQLLVELTEQDIVQTDRRLRHEKNQ
VVAMQHEAQRLEALLEQEDRAVERLGRVLAVAESCERRARSLEGDVPPGEGEPPLGLADA
ARVFRSLQSEFYEEYRAFDLATLAVLTVQPLLKQSFAGWDPLKDPSFGLDVAREWKAILE
ESQNVLQTVHPQLGPLAGSSGGGGGTNMDPYHRLMWDTWMPCVRSAVVRWQPRACEPMVD
MVEHWMEFLPPWILNNVLEQLIFPKLQREVENWNPLTDTVPIHAWIHPWLPLMGGARLEP
LYSPIRSKLGSALQRWHPSDPSAKLILRPWKEVFSPGSWEAFMLKHILPKLGMCLSDFVI
NPHQQHLDPFRWVIDWEGMLSPASLVTLLDKHFFAKWLQVLCAWLSNNPNYEEIIKWYQG
WKSLFSEQLLAHVTVKEKFSEALDIMNRAVSMPHGPVGFTQPGAREHIAYLTQTERRRDF
QPDGGPAPPPTSTVPPGPQGPPGPAVGVAQPVPLSFKELVQARAEENNIVFMPLLGRRHE
GKQLYTFGRQVAYIDRGVVFVQGEKTWVPTSLQSLVDSAK
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcgcacttgtacgggcgcgacgaggacgtgaatgtggagcgtttcgaggtg
accgactgggacttggagaacgagttcaaccccgagcgcgtgcgccaccgccagagcaag
gaggaggccgtgtacggggtctgggctgaggacgacgacgatgacgatgagaggcccgga
ttctcgggcgggaggagcaagaaccgcgacttcacggcccccgtgagcttcgtgagcggc
ggagtgaagcggcccgccgccgaggaagaggaggatgaagacgacgacgaggaggcggcc
tcgggcaagggctccggcggcgaggaggacggcgcccgtctggggccctggaacgaggcg
ctgcagagggcgaagggtgggcgcggcgccaggcagtcccagaaggggggcatcaggcct
tcccgtaccgtggccggactgccccccgagaagggcttcggcagctgggagcgacacacg
aagggcattgggcaaaagctgctgcagaagatgggctacgtccccggcctgggactgggc
aagaacgcgcagggcatcgtcttgccggtggaagccaaggtccgcaagggccgaggagcg
atcggagcgcacggtcctgagcgaacaaaacagtcactccgtgatttcccggctcccaag
tccgacgaggaggaagaggaggagttcaagcagcagctgagccagtggcggaaggagccc
ggcaccggagccggcgccaccaagaagggtccacggtacacctaccgcaccgtggaggag
ctcaaggctaaggggctaggccgcaaggtggcgccgccctcacagctcagccaagtcaag
gtaatcgacctgactggcaagagccagaaggtttactacagctacgatcagatgagccag
cgccacagcgttccgtcagacgaggccgaggccgcggagggagaagccgcatcgccgagc
gagagcaagcgcaaggggttcgccctgccagagctggagcacaacctccagctgctggtg
gagctcacggagcaggacattgtgcagaccgaccgtcggctgcgccacgagaagaaccag
gtggtggctatgcagcacgaagcccagcggctggaggcgctgctggagcaggaggaccgc
gccgtggagcggctgggccgcgtgctggccgtggccgagtcctgcgagcgccgcgcccgc
tcgctcgagggggacgtgccgccgggggagggggagccgccgctcggcctcgccgacgcg
gcccgggtcttccgctcgctgcagagcgaattctacgaggaataccgcgccttcgacctc
gccacgctcgccgtgctcaccgtgcagccactcctcaagcagagctttgccgggtgggac
cccctcaaggacccgtcgttcggcctggacgtggcgcgcgagtggaaggccatcctggag
gagagccagaacgtgctgcagaccgtgcacccacagctgggcccgctcgccggcagtagc
ggcggcggtggaggcaccaacatggacccctaccaccgcctcatgtgggacacgtggatg
ccgtgcgtgcgttccgccgtggttcggtggcagccgcgtgcctgcgagcccatggtggat
atggtggagcactggatggagttcctgccgccctggattctcaacaacgtcctggagcag
ctcatcttccccaaacttcagcgcgaggtggaaaactggaacccgctgacagacacggtg
cccatccacgcgtggatccacccgtggctgcccctgatgggcggcgctcggctagagccg
ctctactcgcccatccggagcaagctgggcagcgccctgcagcgctggcatcccagcgac
ccttccgccaaactcatcctgcggccgtggaaggaggtgttctccccgggcagctgggag
gccttcatgctcaagcacatcctgcccaagctcggaatgtgtctctcggacttcgtgatc
aaccctcaccagcagcacctggaccccttccgctgggtgatcgactgggaagggatgctg
tctcccgccagcctcgtcacgctgctcgacaaacatttctttgccaagtggcttcaggtg
ctgtgcgcgtggctcagcaacaaccccaactacgaggagatcatcaagtggtaccagggc
tggaagtcgctcttctcggagcagctgctggcgcacgtcaccgtcaaggagaagttcagc
gaggcgctggacatcatgaatcgcgccgtgtccatgccgcacggacccgtgggcttcacg
cagcccggcgcacgcgagcacatcgcctacctcacccagaccgagcgccggcgagacttc
cagcccgacgggggcccagcgccccctccgacctcgactgtccccccgggcccccagggc
ccaccgggccccgccgtgggcgtcgcgcagccggtgccgctgagcttcaaggagctggtg
caggcgcgagccgaggagaacaacatcgtgttcatgccgctgctgggccggcgccacgag
ggcaagcagctgtacacgtttgggcgccaggtggcgtacatcgaccgcggcgtcgtcttc
gtgcagggagagaagacgtgggtgcccacgtcgctacagagccttgtcgacagcgccaag
tga
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