Lethenteron reissneri (Far Eastern brook lamprey): 133348412
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Entry
133348412 CDS
T09663
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1-like isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
133348412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrj04121
]
133348412
Enzymes [BR:
lrj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133348412
Ubiquitin system [BR:
lrj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133348412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-rbx1
zf-RING_2
zf-RING_UBOX
zf-ANAPC11
WWE_5
zf-UDP
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
133348412
NCBI-ProteinID:
XP_061417188
LinkDB
All DBs
Position
27:complement(4749328..4850778)
Genome browser
AA seq
835 aa
AA seq
DB search
MMPLLGSEMQLLASGAHPSALAGASPLALAPQPVWRVVVWEWLDDQQPSPLGAPTTQPTP
QPPPQQQPHNGQQQQTTTTHQQSQASTQQQQQLQQQQQLQQQQQQQPATVWRAYSAAVCH
HIETVLRSGGLQGGGGGGMRGGSVSGGGAGGASLGGSGSVVLGQADPTLSPYILDLQSMQ
QFRQDTGTMRPVRRSFYDPSAAPGRGVVWEWESEGGVWTPYPMDVCVTIQNAHEKQHPWL
DLATLGLPILLDFTAMCQIGRLGQTRRRVRRRLDTPYPLLVINSGGGSLAAGPLALPKSQ
SWPVGAGQASGGQGHHGGQHQQMHQQQIQQQQQQQQQQMSLLCACPQCLHQQQQQQSHHH
HQNVQGHAQQQQQQQNMLGVTAYGTVTQRPALSTNNLASTATAGNVTHHQQQQMQMQQAM
SQQQQQQQRRRETFSSPTRQTQGQARSGLTVSRPRSQPALQAIAAGYTPANRGLGMPAIA
MATSVSAPNNLNRPGVKQQRSVVGFTGSARPPGWVASRHACPPACLRMVPALPVKNLGGS
GPINPALAGITGILMCAAGLPVFLTRAPKPVLHPPSVSKGELRAVPGVSGSCRKIKKKHA
RKGGRSPEEVVKKYLQKLKNPPDEDCTICMERLNVPSGYDGMCSHGSVKSEVVGRLGKCG
HAFHALCMLAMYANGNKDGSLQCPTCKTIYGEKTGTQPPGKMEYHVIPYSLPGYSDCKTI
RIIYDIPPGMQGPEHPNPGKKFTARGFPRHCYLPDNETGRKVLRLLIVAWERRLIFTVGT
SSTTGESDTVVWNEIHHKTEFGSNVTGHGFPDPNYLENVQAELAAQGVTEASLVD
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgatgccgctgctcgggtccgagatgcagctcctcgcttcgggagcgcatcccagcgcg
ctggccggcgcctcgccgctcgccctcgccccgcagcccgtgtggcgagtcgtggtctgg
gagtggctggacgatcagcagccatccccgctcggcgcgccgacgacgcagccgacgccg
cagccgccgccgcagcagcagccgcataacggacagcagcagcagacgacgacgacgcat
caacaatcgcaagcgtcaacacagcagcaacagcagctgcagcagcaacagcagctgcag
cagcaacagcagcagcagccggctacggtgtggcgagcatacagcgcagcggtgtgtcac
cacatcgagacggttctgcgttcgggaggtttgcagggcggtggtggtggtggcatgcga
ggtggcagcgtgagtggtggtggggctggcggggctagcctcgggggctcgggcagcgtg
gtgcttggccaagccgacccgacactgtcgccctacatcctcgacctgcagagcatgcaa
caattccgccaggacacggggacaatgagaccggtgcgacggagcttctacgatccctcg
gcggccccgggccgcggcgtcgtgtgggagtgggagagcgagggtggcgtgtggaccccg
taccccatggacgtgtgcgtcaccatccagaacgcgcacgagaagcagcacccgtggctc
gacctggccacgctggggctgccaatcctgctcgacttcacggccatgtgccagatcggg
cggctcggccagacgcgccgccgcgtccgacggcgcctcgacacgccgtacccgctgctc
gtcatcaacagcggcggcggcagcctggccgcggggcctctcgccctgcccaagtcgcag
tcgtggcccgtcggagccggacaggcctccggcggccagggacaccacggcggccagcat
cagcagatgcatcagcagcaaatccagcagcagcagcaacagcaacagcagcagatgtcg
ctgctatgcgcgtgtcctcagtgtttgcaccagcagcagcagcagcagagccaccaccac
caccagaatgtgcagggacatgcccagcagcagcagcagcagcaaaacatgctgggtgtc
accgcctacgggacggtgactcagcggcccgctctgtccaccaacaacctggcctctacg
gccacggctggcaacgtcacgcatcatcagcagcagcagatgcaaatgcagcaggcaatg
tcccagcagcagcagcaacagcagaggagacgcgagacattcagctcgccgacgaggcag
acacaggggcaggccaggtcaggcttgaccgtgagcagaccacggtcacagcccgctctg
caggccatcgccgcgggatacacgccggccaatcgcggcctggggatgccggctatcgcc
atggccacctccgtgtctgccccgaacaacctcaaccggcccggcgtgaagcagcagagg
agcgtggtgggcttcacgggctcggcgcgcccaccagggtgggtggcaagccgccacgcg
tgtccgcctgcttgcctgcgcatggtgcctgcgctgcctgttaagaatctgggtggctct
ggcccaataaatccagccctggcgggcatcacgggcatcttgatgtgcgcggccggcctg
ccggtgttccttacgcgtgcgcccaagcccgtgctgcacccgccctcggtcagcaagggg
gagctgcgcgccgtgcccggcgtgtcgggctcctgccgcaagatcaagaagaagcacgcg
cgcaagggaggtcggagcccagaagaggtcgtgaagaaatacctgcagaagttgaagaac
cctccggatgaggactgcaccatctgcatggagcggctgaacgtgccgtcgggctacgac
gggatgtgcagccacggcagcgtcaagtcggaggtggtgggccgcttggggaagtgcggc
cacgcgtttcacgcgctctgcatgctcgccatgtacgccaatggcaacaaggacggcagc
ctgcagtgcccgacgtgcaagacgatctacggcgagaagacgggcacgcagccgccgggc
aagatggagtaccacgtcatcccgtactcgctgcccggatactctgactgcaagacgatc
cgcatcatctacgacatcccacccggcatgcagggccccgagcaccccaaccccgggaag
aagttcacggctcgcgggttccctcgccactgctacctgcccgacaacgagacgggccgc
aaggtgctgaggctgctgatcgtggcgtgggagcggcggctcatcttcacggtgggcacg
tcgagcaccacgggcgagtcggacaccgtcgtgtggaacgagatccaccacaagacggag
ttcggctccaacgtgacgggccacggattccccgaccccaactacctggagaacgtccag
gccgagttggccgcgcagggcgtcaccgaggccagcctggtggactga
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