Lethenteron reissneri (Far Eastern brook lamprey): 133348474
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Entry
133348474 CDS
T09663
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent N-type calcium channel subunit alpha-1B-like
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04010
MAPK signaling pathway
lrj04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133348474
04020 Calcium signaling pathway
133348474
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lrj04040
]
133348474
Ion channels [BR:
lrj04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
133348474
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
133348474
NCBI-ProteinID:
XP_061417288
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All DBs
Position
27:16694472..16827533
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AA seq
2120 aa
AA seq
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MILATIIANCIVLALEQHLPNDDKTPLSLRLEETEPYFIAIFCLETAIKILALGFVFHKG
SYLHSGWNIMDFVVVLTGMLAMMGTDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKA
MIPLLQIGMLLFFAILMFAIIGLEFYVGKFHTTCMLNNTEYDSDPCGLEAPARLCPKDLE
CKGYWEGPNYGITQFDNILFAGLTVFQCITMEGWVDVLYNTNDALGNTWNWLYFIPLIII
GSFFMLNLALGVLSGEFAKERERVENRRAFLKLRRQQQLDRELNGYLEWICKAEEVMLEE
EDKHAEDRSALDVLRRATVKRSRNDLINAEEGDGYFSDNSSVDSPFAHGSQRSGRHSGGA
TYFRRKEKHLRFSIRRMVKSQAFYWGVLFMVGLNTLCVAIVHHDQPEELSVFLHYAEFVF
LALFLLEVMLKIYGLGPRPYFHSAFNCFDFGVIVGSMVEMAVSWLRPGSAFGISVLRALR
LLRIFKVTKYWASLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEEGT
PPTNFDTFPAAILTVFQILTGEDWNAVMYDGIKSQGGVKKGMMASCYFIVLTLFGNYTLL
NVFLAIAVDNLANAQELTKDEEEEQEATNKKLLSIKKDAEEISPLSTVNTPSSRPLSVWE
QHSTRLRRSSSDALRVSCEQLYSELDPAAQRRMAYSLHIGPDSHSHLDRPLSVSPRPPAQ
CAYPDGREGWKPSDVSEESSAPQRKQGGSRCPGVAAAANVEGGTDGAGLNHRRGRGHSKA
AATSQDSDPERARSHGATVEPGQERDTETGRGRKRHSNHRHHHHHHHHNHHHHIRRYSPA
DDDVNGLQLPRQPPLSPLPEGGVLDGPARPGESGRPDGAGGHGAPGRSEGPQGAGEQPRH
HKKKHSTCKRRHQPVTPESSLEAPIPEQAEDADNQLNNRRAVTETTAQPHTLGGTPSGQS
QENSIPMNSLGVQLEVLPEKKDEGGGDVNEGGSGPKPMVPFSSMFIFSPTNPIRRACHYV
VNLRYFEITILSVITMSSIALAAEDPVRTDSLHNNVLKYFDFVFTGVFTFEMVVKMVDLG
LFLHRGAYFRDLWNILDFIVVSGALVAFTFTESKGNNLNTIKSLRVLRVLRPLKTIKRLP
KLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGRFYYCTDESKEYEKDCRGYF
LEYDRDKVDPHPREWKRFDFHYDNVLWALLTLFTVSTGEGWPQVLKHSVDATYEERGPSP
GYRMETSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKVMLDCTLEKNERACIDFAISA
RPHTRYMPADRNSLRFRVWTFVVSPPFDYFIMAMIALNTVVLMMKFYGAPAAYDDSLKYL
NIIFTIVFSLECILKLVGFGFLNYFRDAWNVFDLVTVGGSVTDILVTELVNNFINLSFLR
LFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIGMLFFIYAIIGMQVFGNIALDD
GYGINRHNNFRTFFQALMLLFRSATGEAWHEIMLACRSPRPCDELAGRHKSEECGSGFAY
FYFVSFIFFCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLEEFIRVWAEYDPSACGRMK
HSDMQAMLRHMAPPLGLGKRCPAHIAYKRLMRMHMPIEVDGTVHFTSTLVALIRTALEIK
MASGAKDQLAMDMELRREIMTVWQHLSNKTLDLLVPPRTPTDLTVGKVNAVKMILDFYRV
HRSKQVGTEASVPHSRRKIGPTVVPAPLVAKSPQYKLECMQPLLAPTLSAESDCLLSLES
QGRAVSMPRLAGSTQTGPMKRSASAVGNGNRCELDDGVGGAGPKDRMGPATRTAARDGGG
SREGAGPKEGTVPKEGTGLTEGTGLREGTGPKEGAGPREGTGRTKGTGPRDRTRPKEGVE
SKTATLEGVGKGVGSGDRSHTAERTGNHRYRSRERHRQQQQQQHHHPQHYDTDVEAYRTC
SPSLNHERQMSPGPAPSTSGGSTPHRSRRQLPRTPATPRPTLTYTHSGHDAPSTGSQHAH
GAPLRAHRTRAGPAAAAAARGGHAAVTPVSSAQEDGSMVSAVSHQERAPSDRSGLTSRRY
VSESQLSCNYSDAESHERYG
NT seq
6363 nt
NT seq
+upstream
nt +downstream
nt
atgatcctggccacgatcatcgccaactgcatcgtcctggcgctggaacagcacctcccc
aacgatgacaagacacctctctctttgcgcctggaggagacagagccatattttattgcc
atcttctgtctggagacggcgattaagatcctggccctaggattcgtgttccacaaaggg
tcttacttgcacagtggctggaacatcatggactttgtggtggtgctgacaggtatgttg
gcgatgatgggcacagactttgacctgcgaactctgcgcgcagtgcgtgtactgagacca
ttaaaacttgtatcaggaattcccagcctgcaggtggtgctgaagtccattatgaaggcg
atgatcccattgctgcagatcgggatgctcctgttctttgccatcctcatgtttgccatc
atcgggctggagttctacgtggggaagttccacaccacctgcatgctcaacaacacagag
tatgacagcgacccgtgtggcctggaggctccggctcgcctctgccccaaggacctcgag
tgcaagggctattgggaaggccccaactacggcatcacgcagtttgacaacatcctcttt
gcgggactgaccgtgttccagtgcatcaccatggagggatgggtggacgtcctctacaac
accaacgacgcgctgggcaacacgtggaactggctctacttcatccccctcatcatcatc
gggtccttcttcatgctcaacctcgccctgggagtcctgtctggggagtttgccaaggag
cgagagagagtggagaacaggagagcctttctgaagcttcgccggcaacaacagctggat
cgcgagctcaacggctacctcgagtggatctgcaaagctgaggaggttatgctggaagag
gaagacaaacacgcagaggacaggtcagccctcgatgtgctccgcagggccacggtgaag
cggagccgtaacgacctcatcaacgcggaggagggagacggctacttcagcgacaactcg
tccgtggactctccgtttgcgcacggcagccagcgcagcgggcgccacagcggcggcgcc
acctacttccgccgcaaggagaagcacctgcgcttctccatccgccgcatggtcaagtca
caggccttctactggggcgtgctcttcatggtgggcctcaacacgctctgcgtcgccatc
gtgcaccacgaccagcccgaggagctctccgtcttcctgcactacgcggagtttgtgttc
ctggcgctcttcctcctggaggtgatgctcaagatctacgggctgggcccccgcccttac
ttccactcggccttcaactgcttcgactttggagtgattgtggggagcatggtggagatg
gcggtgtcgtggttgcgcccgggatcggcgttcgggatcagcgtgctgcgcgccctgcgt
ctcctgcgcatattcaaggtcaccaagtactgggcatcactgcggaacctcgtcgtgtcc
ctgctcaactccatgaagtcgatcatctctctcctctttctcctcttcctcttcatcgtc
gtcttcgccctgctcggcatgcagctctttggcggacagttcaatttcgaagagggcaca
cccccaaccaactttgatactttcccagcagccatcctcactgtgttccagattctaacc
ggggaggactggaatgccgtgatgtacgatggcatcaagtcccagggcggggtgaagaag
ggaatgatggcatcgtgctatttcatcgtcctcaccctctttgggaactacaccctgctc
aacgtgttcctcgccattgccgtggacaacctcgcgaacgcccaggagctcaccaaggat
gaagaggaggagcaggaagcgacgaacaagaagctgttgtcgattaaaaaggacgccgaa
gagatcagccccttgtctaccgtgaacacacccagcagccgccctctgtcggtgtgggag
caacactcgacccgcctgcgccgctccagctcggacgccctcagggtcagctgcgagcaa
ctgtacagcgagctggaccccgcggcccagcggcggatggcctactcgctccacatcggg
ccggactcgcacagccacctggaccgcccactcagcgtctccccgcgccctcctgcccag
tgtgcgtacccagacgggagagagggctggaagccaagtgacgtttcggaggaatcgagc
gctccccagcggaagcagggcggctctcggtgcccgggtgtcgccgctgccgcgaatgtc
gaggggggcaccgacggcgccgggctcaaccatcgcagggggcgcggccacagcaaagcc
gcggcgaccagccaggactcggaccccgagagagcacggagccatggcgccacagtggag
cccggccaggaaagagatacggagacagggcggggaaggaaacgccactccaatcaccga
catcaccatcatcaccatcaccataatcaccaccatcacattcgcaggtacagcccggct
gacgatgatgtcaacggattgcagttgccacgccagcccccgctgtccccgctccccgag
gggggggtgctggatgggccggcgaggccgggggagtcggggaggccggatggggccggt
gggcacggggcgccaggtcgctcggaggggccgcagggagccggagaacagccgagacat
cacaagaagaaacattccacctgcaagaggaggcaccagcccgtgacgccggagagctcc
ttggaagcccccatccccgagcaggcggaagacgccgacaaccagctcaacaaccgacga
gccgtcaccgagacgacggcacagccgcacacgctcggaggcacgcccagcggccagtca
caggagaacagcatccccatgaacagccttggcgtgcagctggaggtgctgccagagaag
aaagacgagggtggaggggatgtcaacgaaggaggaagtggaccaaagcccatggtgcct
tttagctccatgttcatttttagtccaaccaacccgattcggcgcgcgtgtcactacgtg
gtgaacctgcggtattttgagatcaccatcctgtccgtgatcaccatgagcagcatcgcc
ctggcggccgaggaccccgtccgcaccgactctctgcacaacaacgtgctcaagtacttt
gacttcgtattcaccggagtgttcaccttcgagatggtcgtcaagatggtcgacctcggg
ttgtttctgcaccgaggagcgtactttcgtgacctctggaacattttggacttcatcgtc
gtcagcggagccctggtggcgttcaccttcacagagagcaaggggaacaatctgaacacg
attaagtccctgcgagtgctgcgcgtgctgcgccccctcaagaccatcaagcggctcccc
aagctcaaggcggtgttcgactgcgtggtcaactcgctcaagaacgtgctcaacatcctc
atcgtctacatgctcttcatgttcatcttcgccgtcatcgccgtgcagctcttcaaaggc
cgattctactactgcacagacgagtccaaggagtacgagaaggattgccgtggctacttc
ttggagtacgaccgcgacaaagtggaccctcacccgcgcgagtggaagcggttcgacttc
cactacgacaacgtcctgtgggctctgctcacgctgtttacagtctccacgggggagggc
tggccacaggtcctgaagcactcggtggacgccacgtacgaggagaggggccccagcccc
ggctaccgaatggagacctccatcttctacgtcgtctatttcgtcgtcttccccttcttc
ttcgtcaacatcttcgtggcgctcatcatcatcaccttccaggagcagggggacaaggtc
atgttggactgcactctggagaagaacgagagggcgtgcatcgactttgcgatcagcgcg
cgcccgcacacgcgctacatgccggccgaccggaacagcctccgcttccgcgtgtggacg
ttcgtggtgtcgcccccctttgactacttcatcatggccatgatcgccctcaacaccgtc
gtgctcatgatgaagttctacggcgcgccggccgcctacgacgactcgttgaaatacctc
aacattattttcaccatcgtcttttccctggagtgcatcttgaaactcgtcggcttcggc
ttcctgaattatttccgcgacgcttggaatgtcttcgacctcgtcaccgtcggagggagc
gtcacggacattttagtgacggaactcgtgaacaatttcatcaacctgagtttcctgcgg
ctgttccgcgccgcccgtctcatcaagctgctgcgccagggctacaccatccgcatcctg
ctctggaccttcgtgcagtccttcaaggctttgccgtacgtctgtctgctcattgggatg
ctcttcttcatctacgccatcatcggcatgcaggtgtttggcaatatagcgctggatgac
ggctatgggatcaaccgccataacaactttcgaacgttcttccaagcgctgatgcttcta
ttcaggagtgcgacgggcgaggcgtggcacgagatcatgctggcgtgccgctccccgcgg
ccgtgcgacgagctcgcgggccgccacaagagcgaggagtgcggcagcggattcgcctac
ttctacttcgtctccttcattttcttctgctccttcctgatgctgaacctgtttgtggcg
gtgataatggacaactttgaatacctcaccagagactcgtccatactcgggcctcaccac
ctggaggagttcatacgcgtgtgggccgagtacgatccttccgcctgtggcaggatgaag
cactcggacatgcaggccatgctgcgtcacatggcccctccgctggggctgggcaagcgc
tgcccggcgcacatcgcgtacaagcggttgatgcggatgcacatgcccatagaggtggac
ggaaccgtacacttcacgtccacgctggtggcgctcatccgcacggccttggaaatcaag
atggcgtccggggcaaaagaccaactggccatggacatggagctgaggagagagatcatg
acagtgtggcagcacctgtccaacaaaaccctggatctgttggtgccgcccagaacgcct
accgacttgacggtggggaaggtgaacgccgtgaagatgattttggatttttaccgagtg
caccgaagcaagcaggtgggcacggaggcgagcgtgccgcactccaggcgtaagatcgga
cccactgtggtgcctgctccccttgttgccaagtctccgcaatacaagctggagtgtatg
caaccattgttggccccaaccctcagtgccgagagtgactgtctgctttccctggagagt
caggggcgagctgtgtccatgccgcggctagctgggagcacgcagacgggcccaatgaag
agatcagcgtctgccgttggaaatggaaaccgatgcgagttagatgacggtgtgggtgga
gcggggcccaaggacaggatggggcctgctacgagaacagccgcacgtgacggaggaggc
tcgcgagaaggagcaggcccgaaggaggggaccgtcccgaaggaggggacaggcctgaca
gaagggacaggcctaagggaaggcacaggcccgaaggagggggcaggcccacgggagggc
acgggacgaaccaaggggacggggcccagggacaggacaaggcccaaagagggtgtggag
tctaagacagccactttagagggggtggggaaaggtgtggggtctggagaccgctctcat
accgcggagagaactggaaaccatcgctaccgatcacgcgagcgacaccgtcaacagcag
cagcagcagcatcatcatccccagcattatgacactgacgtggaggcctacaggacgtgc
tcgcccagcctcaatcatgagagacaaatgagcccgggccccgccccgtccacgtcgggg
ggcagcaccccgcaccggtcccggcggcagttgccgcgcacgccggccacgccgcggccc
acgctcacgtacacgcacagcgggcacgacgcgccctcgacgggctcgcagcacgcgcac
ggcgcgccgctcagggcgcaccgcacgcgcgcgggccccgccgccgccgccgccgcccgc
ggcgggcacgcggccgtgacgccggtctcctcggcgcaggaggacggctccatggtgtcg
gccgtgtcgcaccaggagcgcgcaccctccgaccgctccgggctcacgagccggcgctac
gtgtcggaatcccagctgagctgcaactacagcgatgcggagagccacgagagatacggc
tag
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