Lethenteron reissneri (Far Eastern brook lamprey): 133348763
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Entry
133348763 CDS
T09663
Name
(RefSeq) helicase SRCAP-like
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
SEO_C
Motif
Other DBs
NCBI-GeneID:
133348763
NCBI-ProteinID:
XP_061417720
LinkDB
All DBs
Position
28:2890551..2918855
Genome browser
AA seq
3178 aa
AA seq
DB search
MYHGEDKLDVRLSGPGSEKTISSSGDGSSSNNKQTGHGIISSQPPAAVHSAEPAEQDSSE
AMGVHRPVLTSSTAQHGIPGMSRDSNASQNANIIPGTSPEFKEELLSTRLLEPDQTLTLD
SQLQTHVWQSSQSPCVKNRSPEVVNAALLETGHELSEACFAEHALDSPVAYRLQHSLSEC
PSNQIETVVENSLEVVQQECSLSSFENFLTKADLPTTLESGELGSLQEDFVVSHDMEQDN
PTSEQLTSTVTISEPHSTPSSVCPEESGDVKNIEQATELLEKSRLSGLICEHDQSEMQKL
RVIHREQVSELYFLQRGGNMVDLQIFLKKPPPQPLQLFLQEKSLDDVEEEGSSETISASS
GHAVGIQHHPAAAVLTSGNSEGPTIHNTTSLAKQASPEGIGPLRSSSRTAALVSSPGSTR
VTRQHCSLTSEAGSTGVPVSRNLQTSLPGSHSTGSRGHASSQPRSLSISSVCASAIDGKD
DIAERAKQEADIQQRVAHLKKAGLWSLKKLTRVTEPPRPKTHRDYLLEEMQWLAGDFAQE
RRWKRALAKKLARTVVRFHEEQKQKEERAKKEELSKLRRIAANIAKEVKYFWTNIEKVVQ
FKQQSLAEEKRKKALDKQLNYIVDQTEKYSDWLSRGLNNSIATSHTGSLSSSPARTEAED
GDFEPTDESDDEETIAQAEREEAASREARRREIELLRREGELSLEELLDSLPPEMLTSPW
QSDFRDGRIGSRQHSRRRSGNLHANGKAWTPTRQDDDDDDDDGQLDEAHCASEEGDVDVD
EDTEDDSVKEGSRHGKRSDSITDDDEFDAEDEDDEDVEETIEEQEGMEGTASHQQELDEL
AREGEMPLEDLYKMYASAYEEQQADEVVSEPPLIVEDVREEVEVKEMEPKSQKEVKNDDN
KPESVDSPTVSNRDENDDQEMEGDEEGSDLGMKFLVTDDKEPQSQAAEEGADGVGPKKEI
TDIAAAAESLQPKGYTLATAQVKTPVPFLLRGSLREYQHIGLDWLVTMNEKMLNGILADE
MGLGKTIQTIALLGHLACDRGNWGPHLVVVPTSVMLNWEMEFKRWFPAFKILTYYGVPKE
RKQKRQGWTRPNAFHVCITSYKLVLQDHQAFRRKKWKYLILDEAQNIKNFKSQRWQSLLN
FNSQHRLLLTGTPLQNSLMELWSLMHFLMPHVFQSHREFREWFSNPLTGMIEGSQEYNES
LVKRLHKVLRPFLLRRIKMDVEKQMPKKYEHIVRCRLSKRQRYLYDDFMSQATTRETLAS
GHFMSVINILMQLRKVCNHPNLFDPRPITSPFITQGICYTTASLVLTALEYDPWRHVDLS
IFDLVNAENQLSRYEAEVFLPNRKVTRKLIEEISTAPDPPPRPKPVRMKVNRMVQPVQKS
EGRTVVMVNAPKSLVQNSLQKPLPSTATDGILPTASPAAVAQRLIAGVSTEQLPSPGLPQ
RLLQGVVPEVAGAAHVYSVAAGQKSVGAVERVASPAVVVQRQALGAIIDTTRPVAPLAQT
PVPVVPRLISELTQHVASPTLQRLAPGIAIDGTQAMLQAQRVAHGLTAEGTQLTAAASPT
LLRLSQGLVIDGTQRAPTVHLQGQPQIRPTTHFVTTQGTALAHAPRMYAAVPIQQHQASG
GQIIRNAASAVNPAVATTLTPTSSPVNPTNPLRLVAQASHMAPLAIQGQRAQLVTGYTLP
SGVVQQRVVLTPHTQARLPSGEVISIAQLAALANSQGQAGQPLTLHIQGNKLTLACSPIR
TLAPGPQHIHIQGGVVHMVKPVSQTQVLAQPGNTKIGMATLPQQQLAGAAISMPARTIAV
PLATSTGSAGLVRQVTPAAAHAAAHAAASAAATATLGAAPRLSTAAVCPPVRLPFVPAPH
APPARMLTQSSGTPLLRVPTVTPVASPQVAKPGLKAVPAAAPLTRGPTTRSVDRKATAEE
APSKRKDSASAAEAPAPKKPAKRSPLYLLRVEELRAQRQQDRLERIHRINEARCAPKPIY
GTEVLRMCNLSSSATQTGSRPHHHEGAWRWSGYVHCRSVRQCCKPSHPDVYWSQTSTLQS
LCINSEQRLRELKEIIERFIFVVPPVESPPISLHAPHPPPSMLQKEKALWQRLHEEMSPR
SAGLHRILCNMRTQFPDLRLIQYDCGKLQTLDILLRKFKAGSHRVLIFTQMTRMLDVLEQ
FLNFHGYIYLRLDGTTRVEQRQFLMDRFNADARIFCFILSTRSGGVGVNLTGADTVVFYD
SDWNPTMDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDVAIEGGNFT
TAYFKQQTIRELFEMPVGMEDASKKEAAEAVPKQAPSTEEDGAVPSKDTNILELALGKAE
DEEDIRAASQARAEQVAELAEFNENAADDGEEGGVGGEGRDEEEPSKAEEEINALVQQLT
PIERYALKYLEASIAAETEEPKSTKEQANVSKQDVKLTKADEPKGDDAAKEIQTQETQPE
DDALAKTRKRGRPCRRSDTSQAADSSQEIDQSDAVPHDESDMTIDKPDFSKLLESASNCT
QELSEASDRACENLHSPASLQQGTGCSFAEQNSKASGSDSAMSGHPEESQPASAPSQGRE
ELLDAHKGDVLEEGATTDSMMENCCTATAVATSPVVSGVREIDDSERSTRSVMTHADAAG
TRDCTNESLESTPENPEQLEESAAKCIDALETLESPHFDKENQTLHATISADNKFTSTIT
SQELKFKNDILKQTDTISPNLDVPCVINANCVNPSVRDEQLNSPVLLMEDPSDSASPVAK
DVEQADLPATGNLDASAEICNNGSSSSLTVNVSPGTLEVSTQRAGSSPVTDAGLTDDLEV
ANIQRQSHPQAEALPAGPADDGSREVEAAEIEKPLKQVLHEDTPSGCDAEDSENTVDGRE
LPDVKPVMKEERMGKPGRKRKTDLNAIVQSHTECQDSATGKEKPRSPIRTRSGIKSRDTK
RSSGMLGARRRLNLRSSSQEVNKREKNKSLSRKDLETQKKAGHSDVVKRRVGRPAKIKSP
SEHINSSDGETQLYKHNMTGSSPGKDLNQSNSDDQEPQAKILCRQEVDSDDRTSADEAGM
PSLPSETCVEGGRSSTPTITRASLRRSVLCQSPARTVDKATRKRRRSSQAASGDERLSGS
DSLCISGSDVGAGRTRGGSSSSASRRSPSQAAAALNRRLTRQAIRRGIGYSSDTTESG
NT seq
9537 nt
NT seq
+upstream
nt +downstream
nt
atgtaccatggggaggacaagctggatgtgagactgtcgggaccgggatcggagaaaacc
atcagcagtagcggcgacggcagcagcagcaacaacaaacagactggtcatgggattata
tccagtcaacctcctgctgccgtccacagcgctgagcctgcagagcaggattcttcagaa
gccatgggcgttcacaggcctgtgttgacctcctcgacagcccagcacggcattcccggg
atgagcagagattccaacgcgtctcaaaatgcaaacatcattccaggaacaagtccggag
tttaaggaggaactgttgtccacgcgacttctcgaacctgaccaaacactaacattagat
tcccaactccaaacccacgtctggcagagcagtcagagtccttgcgtaaagaatcggtca
ccagaagtcgtcaatgcggctctcctggagactggtcatgagttgtcagaggcatgtttt
gcagaacatgcgctggactcgccagtggcttatcgtttacaacattccctgagcgaatgt
ccctcaaaccaaatagaaactgtcgtagagaattcacttgaagtggtgcagcaggagtgt
tctctgtccagcttcgagaattttttgaccaaagcagacttgccaacaacgctggaaagc
ggcgagttgggaagcttgcaagaagatttcgttgtgtcacatgacatggagcaagataat
ccaacttcagaacagctgacgagtacagtgaccatttctgaaccgcacagcactccttcc
tccgtgtgtccggaggaatccggcgatgtgaaaaacatagagcaggcaaccgaacttcta
gagaagagtcgactgagcggattgatctgcgaacatgaccagagtgaaatgcaaaagctg
cgggtgatacacagggagcaggtgagcgagctctactttttgcaacgtggaggcaacatg
gtggacctacagatctttctgaagaagccgccgcctcagccactgcagctctttctgcag
gagaagagccttgatgacgtggaagaggagggctcttcagaaaccatttctgcttcaagt
ggccatgccgtcggtatccagcaccaccctgcagctgctgtgctgacttctggcaattca
gaaggaccaactattcataacactacatcgttagcaaagcaggcgtctccagaaggcatt
ggtcctctacgaagtagcagccgaactgccgcgctggtttcatctcctgggtcaacgcgg
gtgacgcggcagcactgctcgctcacttcggaggcagggtcgaccggtgtccctgtcagc
agaaacctgcagacctccctgcctggcagccacagcactgggtcgagggggcacgcgtct
tcgcagccgcgatcgctttccatttcctccgtttgcgcctctgccattgatggcaaggac
gacatcgctgagcgggcaaagcaggaagcagatatccagcagcgggtggcacacctcaag
aaggccggcctgtggtcactcaagaaactcactcgggtaaccgagccacccagacccaag
actcaccgagactatctacttgaagagatgcagtggctggctggggattttgcccaggag
cgccggtggaagcgtgcgctcgctaaaaagctggcccgcactgtggtgcgcttccacgag
gagcaaaagcagaaggaggagagggccaagaaggaggagctgtccaaacttcgccgcatc
gctgccaacattgccaaagaagtgaagtacttctggaccaatattgagaaggtggtgcag
tttaagcagcagagcctcgcagaggagaagcgcaaaaaggccctggacaagcagctgaac
tacatcgtggatcagactgagaagtactcggactggttgagccgtggcctcaacaactcc
atagctacttctcacacggggtccctttcctcgagcccagcacgcacggaggccgaggat
ggggactttgagccgacggatgagtccgatgacgaggagacgatcgcgcaggcggagcgg
gaagaggcagcgagccgcgaggcgcgtcgccgcgagattgagctgctgcggcgcgagggc
gagctctcgctggaagagctgcttgactcgctgcctccggaaatgctgacgtcgccttgg
cagagcgactttcgcgacggccgcatcggcagtcgccagcacagccggcgccgctcgggc
aacctgcacgccaacggcaaggcgtggacgcccacccgccaggatgacgacgacgacgac
gatgatgggcaactagatgaggctcactgcgccagtgaggagggggacgttgatgttgac
gaggacacggaggatgacagtgtgaaggagggcagcaggcacggcaagcgcagcgactct
attaccgacgacgacgagtttgatgcagaggatgaggatgatgaagatgtggaagagacg
atcgaagagcaggaagggatggaaggcactgccagtcaccagcaggagctggacgagctc
gcgcgggaaggagagatgcctctggaagacctctacaaaatgtatgcaagtgcatatgaa
gagcagcaggcagatgaggttgtgtctgaacccccattaattgtggaggatgtgagggaa
gaggtcgaggtgaaggaaatggaaccaaaaagccaaaaagaagtgaagaatgacgataat
aaaccagagagtgtagattctcccaccgtttcaaaccgagatgagaacgatgatcaagag
atggagggcgatgaagaaggaagcgaccttgggatgaagttccttgtcaccgacgacaag
gagccacagtcccaggctgctgaggaaggtgctgatggtgtaggccccaagaaagaaata
acggatattgcagctgcagctgagagcctgcagcccaagggttacacgctggcgaccgca
caggttaagactcctgtgccttttctgctgaggggctccctgcgtgagtaccagcacatc
ggcctcgactggctggtcacgatgaatgagaagatgctcaatgggattctggctgatgag
atgggcctgggaaaaaccatccagaccatcgctctgcttgggcacctggcctgtgacaga
ggaaactggggtccccatttggtcgtggtgccaacaagcgtcatgttaaactgggagatg
gagttcaagaggtggtttcctgcgtttaaaatcctcacctactatggcgtacccaaggag
aggaagcaaaagagacagggctggaccaggcccaatgcgttccacgtgtgcatcacgtcc
tacaagctggtgctgcaggatcaccaggccttccgtcgcaagaagtggaagtacctcatc
ttggatgaggctcagaatattaagaactttaagtctcagcgatggcagtcactgcttaac
ttcaacagccaacaccggctcctgctgacagggacgccgctgcagaacagcctcatggag
ctgtggtctctcatgcacttcctcatgccgcacgtgttccagtcgcaccgcgagttccgc
gagtggttctccaacccgctcacaggcatgatcgaaggcagccaggagtacaacgagagc
ctggtcaaacgtctgcacaaggttctgcgtccctttctgctgaggagaataaaaatggac
gttgagaagcagatgccaaagaagtacgagcacattgtgcggtgccggctgtccaagcgg
cagcgctacctctacgacgacttcatgtcgcaagccacaacaagagagactctggcgagc
ggtcacttcatgagtgtaatcaacatcctcatgcagcttcgcaaagtttgcaaccacccc
aacctgtttgaccctcggccaatcacgtcgcccttcatcacgcagggcatctgctacacc
accgcctcgctcgtgttgaccgcgctggaatacgatccctggcggcatgtggacctgtcc
atatttgatctggtgaacgccgagaaccagctctcgcgctatgaggccgaggtgttccta
cccaaccgcaaggtgactcgaaagctgatcgaggagatctccactgctccagaccccccg
ccccggcccaagcccgtccgcatgaaggttaacagaatggtgcaacctgtgcagaagtca
gagggccgtacggtggtcatggtcaatgcacccaaatcactggtgcagaacagcctgcag
aaacctctgccttctaccgccacagatgggattttacccacggcatctccggctgctgtg
gcacaaaggctgatcgcgggggttagcacagagcagttgccctcaccgggcctgcctcaa
aggcttctgcaaggcgtggtgccggaggtggcgggggctgcgcatgtctactccgtggct
gcgggacagaagagcgtcggtgccgtggagcgagtggcttctccagcggtcgtggtgcag
aggcaggcgctgggcgccatcattgacacgacccggcctgtggcaccgctcgcacagacc
cccgtgcccgtggttcccaggctgatctcagagctgacgcagcacgtggcatccccgacc
ttgcagaggctcgcaccagggattgccatcgatggaacccaggccatgctgcaggcacag
cgggtcgctcatggccttactgcagaggggacccagctcactgctgccgcttcccccacc
ctattgaggctgtcacagggcttggtcatcgatggcacacagcgcgcccccaccgtacat
ctgcagggacagccccagattcgacccaccacccactttgtaaccacccagggaactgcc
ttggcgcacgccccgcgcatgtacgccgcagttcccatacagcagcatcaggcgagcgga
ggccaaataattcgcaatgcagcttcggctgtgaaccctgctgtcgccaccaccttgacc
cccacgtcctcgcccgtgaaccctacaaacccgctgcggctggtggcccaggccagccac
atggcgccgctggcaattcagggccagagggcccagctcgtcactgggtacacgttgcct
agtggagtggtgcagcagagggtggttctgaccccacacacgcaggcacggctacccagc
ggggaagtcatcagcatcgctcagctggccgcattggccaacagccagggccaggcaggg
cagccgctcaccttgcacatccaaggcaacaaactgacgctggcctgcagcccaatccgt
accctcgctcccggaccccagcacatacacatacagggtggcgtggtgcatatggtgaaa
cccgtgtcacagacacaggtccttgcccagcctggcaacaccaagattggcatggccacc
ctaccccagcagcagttggcaggtgctgccatctcgatgccagcgagaaccatagcagtt
ccacttgccacctctactggctcagctggcttagttaggcaggtcactcctgctgcggcc
cacgctgccgcccacgctgccgcctccgctgccgccactgccaccttaggcgctgcccca
cgtctctctaccgccgccgtctgcccgcctgtgaggcttccttttgtgcctgcgccgcac
gccccgccggcccggatgctgacacaaagcagcggcacccccctgcttagggttcccacg
gtcacgccggttgcctcgccgcaggtcgccaagccaggcctaaaagccgtccccgcggct
gcgccgctgaccagaggtcctacgacccggagcgtggatcgcaaggccacggccgaggag
gccccgtccaaacgcaaggatagcgcttctgccgccgaggcaccggcgccaaaaaagccg
gcaaagaggtcaccgctttacttgttgagagtagaggagctgcgagctcagcggcagcag
gatcggctggagcgcattcaccgcatcaacgaggcgcgctgcgcccccaaacccatctac
ggcaccgaggtgctgcgcatgtgtaacctgtcgagcagcgcgacgcagacgggctcgcgg
ccgcaccaccacgagggcgcctggcggtggtccggctacgtgcactgtcgcagtgtgcgg
cagtgctgcaagcccagccacccggatgtttactggagtcaaacgagcactctgcaaagt
ctctgcatcaactcggagcagaggttgagggagctgaaagaaataatagaaaggtttatc
tttgtggtgccgcccgtggagtctccgcctatctcgctgcacgcgccccaccccccgcct
tccatgctgcagaaggagaaggctctgtggcagcgtctgcatgaagagatgtcgccacgc
tcagccggcctgcaccgcatcctctgcaacatgcgcacacagttccccgatctgcgactc
atccagtacgactgtggcaagcttcagacactggacatccttctgcggaagttcaaagca
ggcagccaccgtgtgctcatcttcacgcagatgacgcgcatgctcgatgttttggagcag
ttcttaaacttccatggctacatctaccttcggttggacggcacaacgcgcgtcgaacag
agacagtttctcatggaccgcttcaacgcggacgctcgcatcttctgcttcatcctgtca
acgcggagtggcggcgtaggcgtcaacctgaccggtgccgatacggtggtgttctacgat
agcgactggaaccccaccatggacgcgcaagctcaggatcgctgccaccgcatcggccag
actcgcgatgtccacatatacaggctgatcagcgagcggaccgtggaagagaacatcctg
aaaaaggccaaccagaagcgcatgctgggggacgtggccatcgagggtggcaacttcacc
actgcttacttcaaacagcaaacgatacgggagttgtttgaaatgccggtgggcatggag
gatgcctcgaagaaggaggcggcagaggcggtgccgaagcaagccccctccaccgaggag
gacggcgccgttccctccaaggacaccaacatcctggagctggctttgggcaaagcggag
gatgaggaggacatccgagcggcgagccaggcccgggctgagcaggtggccgagctggcc
gagtttaacgagaacgcggccgacgacggcgaggagggtggagtggggggagagggccgt
gacgaggaggagccctccaaagccgaggaggaaatcaacgcactcgtgcagcagctgact
ccaatagaaagatacgctctgaagtacctcgaagcgtcaattgcagccgagacggaggaa
cccaagagcaccaaggagcaagctaacgttagcaagcaagatgtgaaattaacaaaggcc
gacgaaccgaaaggtgacgatgccgccaaggaaattcaaacgcaggagacgcagccggaa
gacgacgctctcgccaagacgcgcaagagaggccgcccgtgccgcaggtcagacaccagc
caggcggcagattcttctcaggaaattgaccaatctgacgcagttccgcacgacgaaagc
gatatgaccattgacaagccggatttcagtaaactgcttgaaagcgcgagtaactgcaca
caagaactgagtgaagcgtccgaccgagcgtgcgaaaatttgcattcccctgcgagcttg
caacaggggaccggctgctcctttgccgagcaaaattcaaaagcatcgggcagcgactcg
gccatgagcggtcatccggaggagagccaacccgcgtccgctccgagtcagggtagggag
gagcttcttgatgcacacaaaggagacgttttggaagaaggtgccacaacagattccatg
atggaaaattgctgtaccgcaactgccgtggctacttccccggttgtcagtggcgtaagg
gagattgacgattctgaacgtagtacgcgcagtgtaatgacgcatgctgatgcagcgggt
actcgagactgcacaaatgaatctcttgaaagcacgccagaaaatcccgagcagcttgaa
gaaagcgcagcaaagtgcatcgatgcattagaaacattggaaagcccacattttgacaag
gaaaatcaaactttgcatgctacaatttctgcagataataaattcacgtcaacgataaca
tcacaagaattgaaatttaaaaatgatattttaaaacaaactgataccatttcacccaat
ttggatgtgccttgcgttattaatgctaactgtgtaaatccatccgtaagagatgaacag
ttaaacagtccagtgctattaatggaagacccgtctgatagtgcttcaccggtcgccaag
gatgtagaacaagctgatttgccagccacaggcaatttggacgcatctgctgaaatctgt
aacaatggctctagttctagtttgactgtgaacgtaagtccgggtaccctggaagtgagc
acgcagcgcgctggttcctctcccgtcacggatgccggtttgactgatgatttagaggtg
gccaacatccaacgtcagtctcatccacaagcagaagcattgccagctggcccggcagat
gatggatctcgagaagtggaagcagcagagattgagaaaccccttaagcaagttctgcac
gaggacacgccatcaggttgtgatgcagaggactccgaaaatactgtagatggtagagag
ctgcctgatgttaagcccgtgatgaaggaggagaggatgggtaaaccaggccgcaagagg
aaaaccgatttgaatgccattgtacaaagccatacggaatgccaggacagtgctacgggc
aaggagaagccaaggagccctataagaaccaggtctggcatcaaatcgcgcgatacgaaa
aggtcgtcgggcatgctgggggcaagaagaagactgaatctcaggtcgagtagtcaagaa
gttaacaaacgtgaaaaaaataagtccttgtcaaggaaggacttggaaacgcaaaaaaaa
gctggtcattcagatgtcgtaaagaggagagtgggaagaccagcaaaaattaaaagccca
agtgaacatatcaatagttctgatggagaaacacagctgtataaacacaacatgacgggc
agctcacctggaaaagacctcaaccaaagcaattccgatgaccaagaaccccaagctaaa
attttatgtcggcaggaagtagattctgatgacagaacaagtgcagatgaggctggcatg
ccgtctttaccttcagagacttgtgtcgaaggcggtcggtcgagtaccccgactatcacc
cgcgccagcctccgccgttccgtgttgtgccaatcgccagccaggactgtagataaagcg
acgcgtaagagacggcgatcgtcgcaagcggcaagcggcgacgagcggttaagcggaagc
gactccctctgtatcagtggcagcgatgtcggtgctggccgcacccgtggtggcagcagc
tcctccgccagccgacggtctcccagccaagctgccgctgctctgaataggcgattgacc
cgtcaagcgatccgtcgagggatcggatattccagcgacacaacggagagcgggtag
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integrated database retrieval system
