Lethenteron reissneri (Far Eastern brook lamprey): 133348936
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Entry
133348936 CDS
T09663
Symbol
PAFAH1B1
Name
(RefSeq) platelet-activating factor acetylhydrolase IB subunit beta
KO
K16794
platelet-activating factor acetylhydrolase IB subunit alpha
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj00565
Ether lipid metabolism
lrj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09100 Metabolism
09103 Lipid metabolism
00565 Ether lipid metabolism
133348936 (PAFAH1B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lrj03036
]
133348936 (PAFAH1B1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lrj04147
]
133348936 (PAFAH1B1)
Chromosome and associated proteins [BR:
lrj03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
133348936 (PAFAH1B1)
Exosome [BR:
lrj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133348936 (PAFAH1B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
EIF3I
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_EML
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_Nup120_160
Beta-prop_DCAF4
WD40_RFWD3
LisH_PAC1
Beta-prop_IFT140_1st
LisH
Beta-prop_SCAP
Beta-prop_DCAF12
Beta-prop_RIG_2nd
Beta-prop_SPT8
eIF2A
Beta-prop_WDR75_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Pox_A_type_inc
Nucleoporin_N
Beta-prop_NUP159_NUP214
ARMC9_LisH
SutA-RBD
PROPPIN
DUF2570
LisH_2
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
133348936
NCBI-ProteinID:
XP_061418061
LinkDB
All DBs
Position
28:complement(9770250..9800139)
Genome browser
AA seq
402 aa
AA seq
DB search
MVLSQRQRDELNRAIADYLRSNGYEEAYTTFRKEAELDNNEELDKKFAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEFVSGGGPLGGQRRDPSEWIPRPPEKYALSGHRSPVTRVIFHP
VFSVIVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDLSGKMLASCSADMTVKLWD
FQSFECLRTMHGHDHNVSSVAFMPNGDHLVSASRDKTMKMWEVQTGYCVKTFTGHREWVR
MVRPNQDGSLIASCSNDQTVRVWVTATKECKAELREHEHVVECVSWAPDTXXXXXXHDLG
NSNHFCGTTASMVLCKLHRLPCCRSQVGHDNWVRGVLFHPGGKFILSCADDKTLRVWDYK
NKRCQKSLAAHEHFVTSLDFHKTAPYVITGSVDQSVKVWECR
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggtcctgtctcagagacaacgggatgagctaaatagagccattgcagactatctccgc
tcgaatggttacgaggaggcgtacaccaccttcaggaaggaggctgaattggacaataat
gaagagctggataaaaagtttgctggactgttggagaagaaatggacttctgtcattagg
ctacagaaaaaggtgatggagctggagtcgaagttgaacgaggcgaaggaggagtttgtg
tcgggcggggggcccctcgggggccaacgacgcgaccccagcgagtggatcccgcgcccg
ccggaaaagtacgcgctgagtgggcaccgcagccccgtgacgcgcgtcatcttccacccc
gtgttcagcgtcatcgtgtccgcctcggaggacgccaccatcaaggtgtgggattacgaa
acgggtgactttgagcgcaccttgaagggacacacggactcggtgcaagacatctccttc
gacctctcgggcaagatgctggcttcctgctcagccgacatgaccgtcaaactctgggac
ttccagagcttcgagtgcctgcgcacgatgcacggccacgaccacaacgtgtcttcggtg
gccttcatgccaaatggagaccacctggtgtcggcctcgcgcgacaagaccatgaagatg
tgggaggtgcagactggatactgcgtgaagacgttcacgggccaccgcgagtgggtgcgc
atggtccggcccaatcaggacgggtcgctcatcgccagctgctccaacgaccagactgtg
cgcgtgtgggtgacggccaccaaggagtgcaaggcagaactgcgcgagcatgagcacgtg
gtggagtgtgtgagctgggcgcccgacaccgnnnnnnnnnnnnnnngccacgatttaggt
aattccaaccacttttgtggcactaccgcatcgatggtattgtgcaagctccaccgcttg
ccgtgttgtcgctcgcaggttgggcatgacaactgggtacgtggagtgctgttccacccg
ggtggaaagttcattttgagctgcgccgatgacaagactctgcgcgtgtgggactacaag
aacaagcgctgccagaagagcctggccgcacacgagcactttgtcacctccttggatttc
cacaagacggctccgtatgtcatcacggggagtgtggaccaatcggtcaaggtgtgggag
tgtcgctga
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