Lethenteron reissneri (Far Eastern brook lamprey): 133348946
Help
Entry
133348946 CDS
T09663
Name
(RefSeq) cadherin-2-like
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
133348946
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lrj04515
]
133348946
Cell adhesion molecules [BR:
lrj04515
]
Cadherins
Major cadherins
133348946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_4
CADH_Y-type_LIR
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
133348946
NCBI-ProteinID:
XP_061418082
LinkDB
All DBs
Position
28:complement(11233727..11267238)
Genome browser
AA seq
1041 aa
AA seq
DB search
MSRGVWSGRVLLLPPLLLPLCAFILLQVCSGVHGGHQVTRRTPLSAANATHGSAGGRERG
QSRQTKAAPENGWHQWAVEPAGRQKRSWILPPIKVNHVIENDHGPFPKVFMMIRSDKESS
VNSIVYSLRGPGADQPPVGVFNIDPITGKVNVMFVLDREKISSYALKGFAKDERGNLLEP
ELDLAISVLDENDNAPEFTQMRFMGNVSEKSRAGSPVLTVEATDADDPQTNHVQVVFSII
SQQPPLPSQRMFTIDRSSGIISTGATRFDAEAVKFYTLLIRASDCNGADYGLSSTGTVVI
QVQDVNDNAPMFPRQNLICTVLENMVGESVLVLKTEDGDTPHTPAWRARYRIVSGQHSES
FDIATNYVTNEGILTVSKALDYESTKQVLLVVVVENEEPLWGVQPGAASTATVTVTVRDQ
NEPPEFSPDEIEAAVTEEQPPGVTLGAFTATDPDVGQHQQIRYKMGDDPSGWLSINPTTG
EVRTRARLDREARGIYNGTYTATILAFDNGVPPQTGTATILLRVTDVNDHQPRVKLPYSH
RVCEDLAWQGINVTVLDEDEAPNAGPFTFSLPEEPPEIRNNWKILYQTGEVLVLAPHPDR
VQPGHYSVPVLLADKPGLRSEQVVEVTICYCDDKLTCPAALGGIGLGLAALLIIIFCLLI
LLLLFLAMLCCLWCYPHGCCGYVRSGGALYVVHDQGNFGGVQAYNYEGGGEEDMGMRMNL
LAIDAQGKNGSSWAGAENAKGAAYTKSTTLRASSVAESSRAAAAAEAAAAAAEAAAAASH
IREVKESITTTSSHTTSSAAHDSAGTQARGGRFAGLAHGAAVGGSDAWAGAGGGGVGVSH
VATFTEVGSSSSSSGRGNAMDSRVNGAFGVPAGGATGGTVLETDGRVYHGRISTLGYPRA
SGYGGQVIGQESVSMGRGFTRREVPPPAAVAGPVWPQHHTLPKLVGMKPTADVRKFVAQA
LEWADKDPTVPPFDGLLVFCHEGNREDDHSFSPCVSTANLAEQVAQFRPISNPPPGSCGS
RGSPISRAATPSAASPSMQLP
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcggcgtgtggagtgggcgcgtgttgctgctgccgccgctgctgctaccgctg
tgcgcgttcattctgctccaggtgtgcagtggggtgcatggaggtcaccaggtcacgaga
aggacgccactcagtgcagcaaatgcgacccacggcagcgctggaggacgagagcgcgga
caatctcgacaaacaaaggcggcacccgagaacggctggcaccagtgggccgtcgaaccg
gcaggtcgacaaaaacggtcgtggatccttccgcccattaaagtgaaccacgtgatcgag
aacgaccacggcccgttcccgaaggtcttcatgatgatcaggtcggacaaagagtcgagc
gtgaattcgatagtgtacagcctgcgggggcccggggctgaccaaccgcccgtgggtgtc
ttcaacatcgaccccatcaccggcaaggtcaacgtcatgttcgtcctggaccgggagaag
atttcaagctacgcgctcaagggcttcgcgaaggatgagcgcggcaatctgctggagccc
gagctggacctcgccatcagcgtgctggacgagaacgacaacgcaccggagttcacgcag
atgcgattcatgggcaacgtgtcggagaagagccgtgcagggagcccggtcctgacggtg
gaggccacggacgcggacgacccccagaccaaccacgtacaggtggtgttcagcatcatt
tcgcagcagccgccactgccgtcgcagcgcatgttcaccatcgaccgctccagcggcatc
atcagcacgggagcgactcgcttcgacgcagaggctgtgaagttctacactctgctgatc
cgtgccagtgactgcaacggagcggattacggcctctcttccaccggcacggtcgtcatc
caagtgcaggacgtcaacgacaacgcgccgatgttcccccggcagaacctcatttgcacg
gtgctggagaacatggtgggcgagtcggtgctggtgctgaagacggaggacggcgacacg
ccgcacacgccggcgtggcgcgcccgctaccgcatcgtttccgggcagcacagcgagagc
ttcgacatcgcgaccaactacgtcaccaacgagggcatcctcaccgtcagcaaggccctg
gactacgagtccacgaagcaggtgctgctggtggtggtcgtggagaacgaggagccgctg
tggggcgtgcagcccggcgcggcctccaccgccacggtcaccgttacggtgcgcgaccag
aacgagccgcccgagttttctcccgacgagatcgaggccgccgtcaccgaggagcagcca
ccgggcgtgacgctcggcgcgttcaccgccacagacccggacgtgggccagcaccagcag
atccggtacaaaatgggggacgacccgtccgggtggctctccatcaaccccacgacgggg
gaggtgcgaacgcgagcgagactggaccgcgaggcgcgcggcatctacaacggcacctac
accgccaccatcctggccttcgacaacggcgttcccccgcagacggggacggccaccatc
ctcctgcgggtcacggacgtcaacgaccaccagccccgggtgaagctgccctacagccac
agggtgtgcgaggacctcgcgtggcagggcatcaacgtgacggtactggatgaagacgag
gcgcccaacgccgggcctttcaccttctccctgcccgaggagccgcctgagatccgcaac
aactggaaaatcctctaccagacaggggaggtgctggtgttggctccgcacccggaccgc
gtccagcccggacactacagcgtccccgtgctgctcgcggacaagccgggcctgcggtcc
gagcaggtggtcgaggtcacgatttgctactgcgacgacaaactcacgtgccccgcggcc
ctgggtggcatcggactcggcctcgctgctctgctcatcattattttctgcctcctcata
ctgctgctgctcttcctagcgatgctgtgctgcctatggtgctacccacacggctgctgc
ggctacgtgaggtcagggggcgccctgtacgttgtgcacgaccaggggaactttggcggg
gttcaggcctacaactacgaaggcggaggggaagaggatatggggatgagaatgaacctg
ctggcaatcgacgctcaggggaagaacggctcgagctgggccggcgccgagaacgccaaa
ggcgccgcctacaccaagtccaccaccctgcgcgccagttcggtggcggagtcctctcgc
gccgccgccgcagcggaggcggccgccgccgcagcggaggcggccgccgccgcttctcac
attcgcgaggttaaagagtccatcacgacgacctccagccacacgacttccagcgcggcg
cacgatagcgccggcacgcaggcgcgcggcggacggttcgccggcttggcgcacggcgcg
gcggtcggcgggagcgacgcctgggcaggggccggcggcggcggcgttggcgtcagccac
gtggcgacgtttacggaggtgggcagcagcagcagcagcagtggccggggcaacgcgatg
gactcgcgagtgaacggggcgttcggtgtgccggcgggcggagcgacagggggcaccgtt
ctggagaccgacggccgcgtttaccacgggaggatttcgaccctcggctacccgagggcg
agcggctacggcggtcaagtgatcggccaagagtccgtcagcatggggaggggcttcacc
cgcagggaagtacctccacccgccgccgtcgcaggacccgtctggccgcagcatcacacc
ctccccaagctcgtgggcatgaagccgacggcggacgtgaggaagttcgttgcgcaggct
ctggagtgggcggataaagaccccacggtgcccccgtttgacgggctgctcgtgttttgc
cacgagggcaaccgtgaggacgaccactcgttcagcccgtgcgtcagcacggccaacttg
gcggaacaggtggcgcagttccggcccatctccaacccgccgcccggctcctgtggctcc
cgcggctccccgatctcgcgggctgccaccccttcagccgcttctcccagcatgcaactc
ccctag
DBGET
integrated database retrieval system
