Lethenteron reissneri (Far Eastern brook lamprey): 133349078
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Entry
133349078 CDS
T09663
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj02010
ABC transporters
lrj04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133349078
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
133349078
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lrj02000
]
133349078
Transporters [BR:
lrj02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
133349078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
133349078
NCBI-ProteinID:
XP_061418205
LinkDB
All DBs
Position
4:complement(1984009..2061756)
Genome browser
AA seq
2387 aa
AA seq
DB search
MLGSKPSFPATGQAGSARVRACTQHTYTQSLALTRTHSGTHRRPTQSQALLLLLLWSNSG
SSGSEDRSVSHLCSTSARQSHVTCVHNVRSEFLRESAESSPRVHSPRAAMGFWTQLYLLL
WKNFTLLRRQKLRLLMEVLWPLMIFFILISVRSSYPPHEQHECHFPNKAMPSAGLVPWLQ
SLVCNMNNPCFRHATPGEAPGTVSNFENSLLSRLFEELQEGFVNLTQKGSVEELRGYERL
LSLIKDRDVRRILPVVRVRDMLTDEEGLSFFARQDNLFSEAVIAQLLEAHIHPGQVLANL
TAAGMRAGVCDPELLSHALVLPDPAVQPEAQRQLCNLTETQTRGLLTAFVARLDRSKLMQ
VMMPGVDPKTLDVVGTMVGNLQTVTRLMKETFEELQDDSDGGSSAPNGTMGLMRGFRSVS
RLVCGYPEEGLITIRSMNPYEENNFKSFLSSNMSEEKAYVYDNSTTAYCNNMIQRMESNL
ATRFMWNTVKPLFMGKILFSPNTPAVQRIVREANDTFVKMGMLGNVFEAWRAVKPQLWEF
MQNSQEINGLKDLLRTPEVASVLDAALNGTGWSVDSLLSFLSAQVGGMPGIATHLLQQNW
QVLLNDTDAVLETATQFLECMNLDKFEGQPDEEQLVSRALELLDENEFWAGIVFMDLDPN
SEELPAHVRYKIRMDIDSVQRTNKIKDRYWDPGPRADPFDDLRYIWGGFAYLQDSVEQGI
IRAQTNGSLSVGVYVQQMPYPCYVDDIFLRIMNRSLPMFLTLAWIYSVAMILKEVVHEKE
ARLKETMRIMGLSTSMLWLSWFISILIPLLISAVLLTVLLKMGNILYYSDPTIVYLYLCV
FAIATVMQCFLISTLFSRANLAAATGGIVYFSFYLPYVLCVAWQNQISYSVKISTSIFST
VAFSFGSEFFSLYEEQGVGMQWENVFSSPVEGEDYTFISSIFMMLFDAFIYGLLTVYIEN
VFPGQYGVPKPWYFPCTRAYWRGDTMEKELYETIAQKQPQVDNIFVEDEPGDLPVGVSIQ
GLVKIYNAGKKLAVDGLSLNFYQGQITSFLGHNGAGKTTTMSILTGLFPPTAGTAYILGR
DIRTDIDKIRKNLGVCPQYNVLFDQLTVEEHIWFYARLKGRSEQEAKQEIEQMIQDVDLA
HKRSDISKSLSGGMQRKLSIGIAFVGGSKVVFLDEPTAGVDPYARRGIWNLLLKYRHGRT
IILSTHHMDEADLLGDRIAIISHGRLRCCGSSLFLKNAFGAGYYLTMVKRSGSGGSNSSC
LAGLARFEADSSFTERTRSLLMQVWHGRQAPDDDRHSASSSDEGFGSDESNPDSIADVSS
VTRLLQQHLPDARLIENFGQELTYLLPSHGAKDGSFALLFKELDEKLAELGVSSYGVSDT
TLEEIFLKVAEEPATNSHANNGEIPRKRHRRIRFSGCHLTTHAEPEVDMELAERNVFQGY
RIPELWKKAELGELEKLNELDGKGTQQISGIQLILLQFKALFIKRFHHARRSRKGFVAQI
ILPAVFVCLALVFSLIIPPFGKYPMLQLQPWMYGEQYTFLSNDAPENVKTNSLYDALLNK
PGFGTRCMNGESIPNAACMETKSEWVQPPMSPAMAQTLQSRNWSMEEPSPECRCSGEGRR
VILPDCPEGAGGPPPMQRVQNTTDTLEDLSGRNISDYLVKTYPQAIRKSLKHKYWVNEIR
YGGLSVGKKKLSNSASPKDMDIVFTNVKRVFHIENKAVDVLYSGVKDMVSFLGPKETIKV
WFNNKGWHAIVAFMNMANNAVLRSSLPAGTDPSDYGITAYNHPLNLTKEQLSEVMLLTTS
VDVLVSICVIFAMSFVPASFVLFLIQERVSKAKHLQFVSGVNPTIYWISNFAWDMLNYTV
PATLVVLIFLCFQQQSYTSAANLPVLITLLLLYGWSITPLMYPASFIFRVPSTAYVVLTC
LNLFIGINGSIATFILELFEDDQNLKRINSVLKQIFLIFPHFCLGRGLMDMVKNQAMSDA
FQRFGENRFVDPFSWDMVGKNLFAMAVEGMGFFIINLLVQYRFFCKPRSHRGKLQPVSEE
DEDVARERTRLTNDEGGSDTLVIRNLTKVYNGKKKPAVDRICVGIPPGECFGLLGVNGAG
KTTTFKMLTGDTDITSGDALLNRYSILTHKREVHQNMGYCPQFDAINDLITGREHLEFYA
RLRGVPEKEVSRVAAWGIRKLGLTKYADRAAGNYSGGNKRKLSTAIALVGCPPIVFLDEP
TTGMDPKARRFLWDCILSIIKEGRCVLLTSHSMEECEALCTRMSIMVNGRFQCLGSVQHL
KNKFGDGYTVTLRVAGSPPVLPPVEEFIDSAFPGSLLKERHHNMLQYQLPSAESSLAKIF
NLLALRKEELNVEDYSVSQTTLDQVFINFAKHQSDEDHNSIIQTSVV
NT seq
7164 nt
NT seq
+upstream
nt +downstream
nt
atgctcggttcaaagccgtcatttcctgccaccggccaagccgggagcgcacgtgtgcgc
gcgtgtacgcagcacacatacacacagagtctcgcgttgacacgcactcactcaggcacg
cacaggcggcccacgcagagccaagcgctgctcctcctcctcctctggagcaacagcggc
agcagcggcagcgaggatcgttccgtttcacatctctgctccacgtctgcccgccagtct
cacgtcacgtgcgttcacaacgtccgtagcgagtttctccgagagagtgcggagtcttct
ccgcgcgtccactccccgcgagcagccatggggttctggacacagctctacctgctcctg
tggaagaacttcactctcctccggcgacagaagctgcggctcttaatggaggtgttgtgg
ccgctgatgatcttcttcatcctgatctccgtgcggtcatcgtaccctccccacgagcag
cacgagtgccatttcccaaacaaggcgatgccatcggcggggctggttccctggctgcag
agcctcgtgtgcaacatgaacaacccgtgcttccggcacgcaacccccggggaggctcct
ggcaccgtctccaacttcgaaaactcgctgctctcccgtctctttgaggagctgcaagag
ggcttcgtgaacctgacgcagaagggcagcgtcgaggagctccgtggctacgagcggctg
ctcagcctcatcaaggaccgcgacgtccgtcgaatattgccagtggtgcgagtgcgggac
atgctgacggacgaggagggcctctccttcttcgctcggcaagataacctcttctcggag
gccgtcattgcacagctgctggaggctcacattcatccgggccaggtgctggccaacctg
acggcggcaggcatgcgcgcgggcgtgtgcgacccggagctgctgagccacgcactggtg
ctccccgacccggctgtgcagcccgaagcccagcgccagctgtgcaacctgaccgagacg
cagacgcggggcttgctcaccgccttcgtcgccaggcttgaccgctccaagctcatgcag
gtgatgatgcctggtgtggatcccaaaaccttggacgtggtggggacaatggtgggaaac
ctccaaacggtcaccaggctcatgaaagagacctttgaggagcttcaggacgactcggac
ggaggttcgtcggcccccaacggcacgatggggctgatgcgcggcttccgctcggtgtcg
cggctcgtgtgcggctaccccgaggagggcctcatcaccatccgctccatgaacccctac
gaggagaacaacttcaaatccttcctgagcagcaacatgtccgaagagaaggcctacgtc
tacgacaactccacaactgcgtactgcaacaacatgatccagaggatggaatcaaacctg
gccacgcgcttcatgtggaacactgtcaagccgctgttcatgggaaagatcctcttctct
cccaacacgcccgcggtgcagcgcatcgtgcgagaggccaatgacacgtttgtgaagatg
ggtatgctgggaaatgtgttcgaggcctggcgggcggtaaagcctcaactctgggagttc
atgcagaacagccaggagattaacggcttgaaggacctgctgcggaccccagaggtggcc
tccgtgctggatgccgctctcaacggcacgggctggagcgtcgacagcctcctctccttc
ctcagcgcgcaggtcggcggcatgccgggcatcgccacgcacctcctccagcagaactgg
caggtcctcctcaacgacaccgacgccgtgctggagaccgccacccagttcctcgagtgc
atgaacctggacaagttcgaggggcagccggacgaggagcagctggtgtcgcgagcactg
gagctgttggatgagaacgagttctgggccgggatcgtcttcatggacctggaccccaac
tccgaggagctgcccgcgcacgtccgctacaagatccgcatggacatcgacagcgtgcaa
cggaccaacaagatcaaagacaggtactgggacccgggtcccagagccgaccccttcgac
gacctccgctacatctggggcggttttgcgtacctccaggactccgtggagcaggggatt
atccgcgcccagaccaacgggagcctctccgtgggcgtctacgtgcagcagatgccgtac
ccctgctacgtggacgacatcttcctgcgcatcatgaaccgctcgctgcccatgttcctc
acgctggcgtggatctactcggtggccatgatcctgaaggaggtggtgcacgagaaggag
gcgcggctcaaggagacgatgcgcatcatgggcctcagcaccagcatgctgtggctcagc
tggttcatcagcatcctcatcccgctgctcatcagcgccgtgctgctcaccgtgctgctc
aagatggggaacatcctgtactacagcgaccccacgatcgtgtacctctacctgtgcgtg
ttcgccatcgccacggtcatgcagtgcttcctcatcagcacgctcttctcgcgtgccaac
ctggcagccgccacgggtggcatcgtctacttctctttctacttgccctacgtgctctgc
gtcgcttggcagaatcagatctcctactccgtcaagatctccacgagcatcttctccacg
gtggccttcagcttcggctcggagttcttctccctctacgaggagcagggcgtcggcatg
cagtgggagaacgtcttctccagccccgtggagggcgaagactacaccttcatctcctcc
atattcatgatgctgttcgacgcctttatctacggcctcctcacagtctacatcgagaac
gtgttccccggccagtacggagtccccaagccgtggtacttcccctgcacccgtgcctac
tggcgcggcgacaccatggagaaggagctgtacgagacgatcgctcagaaacaaccgcag
gtggacaacattttcgtggaggacgagccgggcgacctgcccgtgggcgtctccatccag
ggcctggtgaagatctacaatgcgggcaagaagctcgccgtcgacggcctgagcctcaac
ttctaccagggccagatcacctccttcctgggccacaacggggccggcaagaccaccacc
atgtcgatcctgaccgggctgttccctccaacggccggcacggcgtacatcctcggcaga
gacatccggacggacatcgataaaatccgcaagaacctgggcgtgtgcccccagtacaac
gtgctcttcgaccaattgacggtggaggagcacatctggttttatgctcggctgaagggt
cgctccgagcaagaagcgaagcaggagatcgagcagatgatccaggacgtggaccttgcc
cacaagagaagcgacatctccaagagcctctcgggcggcatgcagaggaagctgtccatc
ggcatcgcgttcgtgggcggctccaaggtcgtgttcctggacgagcccacggccggcgtc
gacccctacgcccgccgcggcatctggaacctcctgctcaagtaccggcacggccgcacc
atcatcctgtccacgcaccacatggacgaggcggacctcctgggcgaccgcatcgccatc
atctcccacggccgcctgcgctgctgcggctcgtcgctcttcctgaagaacgccttcggc
gccggctactacctcaccatggtgaagcgcagcggcagcggcgggagcaactcgagctgc
ctggccgggctggcgcgcttcgaggctgacagcagcttcacggagcgcacgcgcagcctg
ctcatgcaggtgtggcacggcaggcaggcccccgatgatgatcgccactcagcgagcagc
tcagacgaaggattcggaagcgatgaatccaaccccgactcgatcgcagacgtgagctcg
gtgacgcggctgttgcagcaacacttgccggacgcccggctcatcgagaactttgggcag
gagctgacctacttgctcccctcccatggcgccaaggacggcagcttcgcgctgctcttc
aaggagctggacgagaagctggcggagctcggcgtctcgagctacggcgtctcggacacc
acgctcgaggagatcttcctgaaagtagccgaggagcctgccaccaacagtcacgcaaac
aacggggagattccgaggaagagacacaggaggatacgtttctccggatgtcatctgacg
acccacgccgagcccgaagtggacatggaactggccgagaggaacgtgtttcaaggatac
agaatcccagagctctggaagaaagcagagctgggagagttggagaagctgaatgagctc
gatgggaagggcacgcagcaaatcagcggcatacagctcatcctgctgcagttcaaggcc
ctcttcatcaagcgcttccaccatgcccgtcgcagccgcaagggattcgtcgcccagatc
atcttgccggctgtgttcgtttgcttggcactggtcttcagcctcatcatccctccgttc
ggaaagtacccaatgcttcagctgcagccctggatgtacggagagcagtacacgttcctg
agtaatgatgctccagagaacgtgaaaacgaactccctgtacgacgcgctgctcaacaaa
ccgggcttcggcacgcgctgcatgaacggagaatccatcccgaacgccgcctgcatggag
acgaaatccgagtgggtccagccaccgatgtctccggccatggcccagaccttgcagtcg
cggaactggagcatggaggagccatcgccggagtgccgatgcagcggagaggggcgccga
gtcatcctgcccgactgccccgaaggggctggggggccgccccccatgcagagagtgcag
aacaccacggacaccctggaggacttgtctgggcgaaacatctccgactacctcgtcaag
acctacccacaggccatccgcaagagtctgaagcacaagtactgggtgaatgaaatcaga
tatgggggcctgtctgttggcaagaagaaattatccaattctgcctcccccaaagacatg
gacatcgtcttcacgaatgtcaagagggtcttccacattgagaacaaggctgttgatgta
ctgtacagtggcgtcaaagacatggtgtccttccttgggccaaaggaaactatcaaggtt
tggttcaacaacaagggctggcacgccatcgtggccttcatgaacatggccaacaacgcg
gtgctgcgctcgagcctgccagcgggcaccgacccctcagactacggcatcacggcctac
aaccacccgctgaacctcaccaaggagcagctgtcggaggtcatgctgctgacgacctcg
gtggatgtgctggtatccatctgcgtgatcttcgccatgtccttcgtgccggcgagcttc
gtgctcttcctcatccaggagcgcgtgagcaaggccaagcacctgcagttcgtgagcgga
gtgaacccgaccatctactggatctccaacttcgcctgggatatgctgaactacacagtg
ccggcgacgctcgtggtgctgatattcctgtgcttccagcaacagtcgtacacatccgct
gccaacctgcccgtgctcatcaccctgctgctgctctatgggtggtcgatcaccccgctc
atgtacccggcgtcgttcatcttccgcgtgcccagcacggcatacgtggtgctcacctgc
ctcaacctcttcatcggcatcaacggcagcatcgccaccttcatcctcgagctcttcgaa
gatgaccagaacctcaagaggatcaactccgttctcaagcagatcttcctcatcttcccg
cacttctgccttggccgtggcctcatggacatggtgaagaaccaggccatgtcggacgca
tttcagcgattcggagagaatcgctttgtggacccgttcagctgggacatggtcggcaag
aacttgtttgccatggccgtggagggcatgggcttctttataatcaacctgctggtgcag
taccgctttttctgcaagcctcggtcgcaccgtgggaagctgcagccagtttccgaggag
gacgaagatgtggcacgcgagaggactcggttgaccaacgacgagggagggagcgatacg
cttgtcatcagaaacctcaccaaggtttacaatggcaaaaagaagccagcggtggatcgc
atctgcgttgggattcctccgggagagtgttttggcctgctgggagtgaatggggctgga
aaaaccacgacattcaagatgctgacaggagacacggacatcacgagcggggacgcactt
cttaaccgatacagcatcctgacccacaagcgggaggtgcaccagaacatgggctactgc
ccgcagttcgacgccatcaacgacctcatcacgggacgggagcacctggagttctacgca
cgcctgcgtggggtccccgagaaggaggtgtccagggtggcagcgtggggcatccgtaag
ctcggtttgaccaagtacgcggatcgcgcagccggaaactacagcggtgggaacaagcgg
aagctgtcgacagccatcgcccttgtggggtgtccacccatcgttttcctggacgagccg
accaccgggatggacccgaaggcacggcgtttcctgtgggactgcatcctcagcatcatc
aaggaggggcggtgcgtgctgctcacctcacacagcatggaggagtgtgaggcgctatgc
acgcgcatgtccatcatggtgaacggaagattccagtgcctgggcagcgtgcagcatctc
aagaacaagtttggcgacggctacacggtgacgctgcgcgtggccggctccccgccggtg
ctgccgcccgtcgaggagttcatcgactcggcgttccccggcagcctcctcaaggagcgc
caccacaacatgctgcagtaccagctgccctccgccgagtcctcgctcgccaagatcttc
aacctgctggcgctgcgcaaggaggagctcaacgtcgaggactactccgtctcccagacc
acgctcgaccaggtgttcatcaattttgcgaagcaccaaagcgacgaggatcacaacagc
atcatccagacgagcgttgtctga
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integrated database retrieval system
