Lethenteron reissneri (Far Eastern brook lamprey): 133349247
Help
Entry
133349247 CDS
T09663
Name
(RefSeq) LOW QUALITY PROTEIN: double-stranded RNA-binding protein Staufen homolog 2-like
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lrj01009
]
133349247
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrj03019
]
133349247
Protein phosphatases and associated proteins [BR:
lrj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133349247
Messenger RNA biogenesis [BR:
lrj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
133349247
mRNA cycle factors
Stress granule specific factors
133349247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
Motif
Other DBs
NCBI-GeneID:
133349247
NCBI-ProteinID:
XP_061418566
LinkDB
All DBs
Position
29:complement(11751433..11789260)
Genome browser
AA seq
708 aa
AA seq
DB search
MAQVSVAAPALSVGAPLPSVAGDACGLEPTSPLLAPPAGQCPVTATTNAIGTIIDGMSSV
SLEENMANPKEKTPMCLVNELARYNKLQAQYKLVREEGPAHAKLFTVELALGEQTWEAEG
SSIKKAQHSAATRALAETALPRPPARPPKHNLGTNPGSITPTVELNGMAMKLGLPVFYRH
FDPPPMPGYRPNYNYRGMPHQRYHHPPMPRAFLVELQVGERKFTGEGRTRQAARHNAASN
ALKDLQSDPLPPKPAPDTQENGNEDEDEENDHDANKSEISQVFEIALKRNLPVNFEVVRE
SGPPHMKSFVTRLSVGQFSAEEEGKSKKLSKKKAAAIVLAELFKLPPLPVVEKPRPTLFK
KKPKSIVKVSPEYSQGMNPISRLAQIQQAKKEREPDYTVVSERSLALRRREFIMQVKVGD
DCASGTGPSKKIAKRNAAETLLLQLGYKPSLPAASPDEKQCQPQEGEKPVDTRKVTFAEP
ASPNQKGILHLSADVYQQMEAARNRAGGPPPQQQQHQQQQQHQQQQQQQQHQQQQHQQQQ
QHPAMGYGKKEPSWGGPGPMHPHGLGNTTATIPRELLMKGGSPTAEAMVKVPPVHMAHAC
QQLDYLAREQGFQVQYMDMQRGKDIMSTLTILPLQIAFHGVGSTVEAARDQAALNTLKQL
SEQGLDALASKGKPDNKGLADKMDPKGMDLGGGLVKTPPGPSPEPIGT
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggtctcggtcgcggccccggctctgtctgtgggtgcccccctcccctctgtg
gccggtgacgcatgcggcctggagcccacaagcccactgctggccccgccggctggtcag
tgccccgtcacagccactaccaacgccatcggcaccatcattgacggcatgtcctctgta
tctctggaggaaaacatggcaaaccccaaagagaagaccccaatgtgtctggtgaatgag
ctggcccgctacaacaagctgcaggcccagtacaagctggtgcgggaggaggggcccgca
catgccaagttgttcacggtcgagctggcgctgggggagcagacctgggaggccgagggc
agcagcatcaagaaggcgcaacactcagctgccacgcgtgccctcgccgagacggcgctg
ccccggccgcccgctcgcccacccaagcacaaccttggcaccaacccagggagcatcaca
cccaccgtggagctcaatgggatggccatgaagctgggcctgcccgtgttctaccgacac
tttgacccgccgcccatgcccggatatcggccaaactacaactaccgcggcatgccgcac
cagaggtaccaccaccccccgatgccacgcgccttcctggtggagctgcaggtgggcgag
cgcaagttcacgggggagggccgtacgcgacaggccgcgcgccacaacgctgccagcaac
gcgctcaaggaccttcaaagcgacccgctgcctcccaagcctgcgcccgacacacaggag
aatggaaacgaggatgaggacgaggagaacgaccatgacgccaacaagtctgagatcagc
caggtgtttgagatcgcgctcaagaggaacttgcccgtcaacttcgaggtggtgcgggag
agcggccccccgcacatgaagagctttgtgacgaggctctcggtggggcagttctccgcc
gaggaggaaggcaagagcaagaagctgtccaagaagaaggcggccgctattgtgctggcc
gagctgttcaagctgccgcccctgcccgtcgtggaaaaaccgcggcccacgctcttcaag
aagaaacccaagtcgatcgtgaaggtgagcccagagtacagccagggcatgaatcccatc
agccggctcgcacagattcagcaggcgaagaaggagcgtgagcccgactacacagtcgtc
tcggagcgcagcctggcgctgcgtcgacgcgagttcatcatgcaggtgaaggtgggcgat
gactgtgcgtcgggcactggtcccagcaagaagatcgccaagcgcaacgcggcggagacg
ctgctgctgcagctgggctacaagccctcgctgccggccgcctcgcccgatgaaaagcag
tgtcagccgcaagagggtgagaagccggtggatacacgcaaagtgaccttcgcggaacca
gccagtcccaaccaaaagggtatcctgcacctgtcagctgatgtctaccagcagatggag
gctgcacgaaaccgggctggtggtccccctccccagcagcagcagcatcagcagcagcag
cagcatcagcagcagcagcagcagcagcagcatcagcagcagcagcatcagcagcagcag
cagcatcctgccatgggctacggcaagaaggagccgtcgtgggggggcccaggccccatg
cacccccacggcctaggaaacaccactgccaccattcccagggagctgctgatgaagggc
ggctcacccacggcggaggccatggtgaaggtgccgcccgtccacatggcccacgcgtgc
cagcaactcgactacctggctcgtgaacaaggcttccaggtgcagtacatggacatgcag
cgtgggaaggatatcatgagcaccctgaccatcctgcccctgcaaatagcgttccatggc
gtgggcagcacggtggaggcggcacgcgatcaggctgccctcaacacattgaagcagtta
tctgaacagggcctggatgctttggccagcaaaggaaaaccagacaataaggggttggct
gacaagatggaccccaaggggatggacttaggcgggggcctcgtgaagacccctcctggc
ccgtcccccgagcccatcggcacatag
DBGET
integrated database retrieval system
