Lethenteron reissneri (Far Eastern brook lamprey): 133349354
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Entry
133349354 CDS
T09663
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj02010
ABC transporters
lrj04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133349354
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
133349354
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lrj02000
]
133349354
Transporters [BR:
lrj02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
133349354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
133349354
NCBI-ProteinID:
XP_061418696
LinkDB
All DBs
Position
4:4395262..4478546
Genome browser
AA seq
2238 aa
AA seq
DB search
MGGRTQLYLLLWKNFALRKRQKVRVFVELLWPLFLFLILVWVRTTTPPSANGECHYRVRA
LPSAGLLPWLQGTMCELGTTCVTSHTHAEAPGEVNNYRDSLLSRVLVDTQGLLMNDSFWR
SLETVWVSRTSAMGLANVILTDPRAWTGNIVLQNVLVDSSPLQAYMKRNLSFPDWAVSDL
MAVQIRPQPFLALSLAQRLSPRALACNTSLQSLVLVIGSSNRSSLVNLTCSLSDEQLQGF
AAAAALSVNASRLSTQVMMSLNRTVSGQLLGLVGTLGPSLGILQQQVMGLDSLKTVMGGL
GGSTGFSLSQLMCGSSGGLSFLDNLGSSNTSSSGTSGGTTTTTTKSQNSSSTASAGNSLC
ANLISMAESSAATKILWKMFKPFLLGKIPYTPDTPAVRAILQQANTTFEALAMLGRLGVA
WDTVSPALYNFFSNSSELQLLRGALASPMVASMLDPALSGSGFTAAGLSTFLSGGNGTTW
RSIMGSMGSVLHTVSSYVQCLELNKFEGQANEGSLVNRSLELLGSSQLWAALVFPELGPA
DPVPRHLKYKIRMDIDSVEVTNRVKDRVYSPGPRNESRYLKFGFAFVQDMVERAAARLFA
GGQPATGIFLQQMPYPCYVQDSFLQMMTSSLPLFMTLAWIYSVAMILKGVVHEKEARLKE
TMRMMGLTNGLHWLGWFISCFIPFIVSAICLILILKFGNVFPNSSFLILLLYFLAFTVAT
IMQCFLVSTFFARANLAAACGGILYFLLYLPYVLCNVWQDRLTFPMKILASLLSTVSFGF
GSEYISQYEQLGVGSQPSNLRVSTVDGDRYSLVTSIIMMFLDALLYGVLTWYIENVFPGQ
YGVPRRWYFPFTRSYWCGASSHDGQTLPHSYKPPSSGDKQILEEEPGKLPVGVSIQGLVK
VYDEGKKLAVDGLTLNFYQGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYMCGKDIRT
DMDSIRKSLGMCPQHNVLFENLTVEEHIWFYARMKGCSEEQVKQEMPQMILDVGLPHKKD
ELSKNLSGGMQRKLSVAIAFVGGSQIVILDEPTAGVDPYARRGIWNLLLKYRHGRTIILS
THHMDEADLLGDRVAIISHGRLRCCGSSLFLKNAFGAGYYLTMVKSEPGSRRPSAGAAHL
YKNLEQTDGQSQSSDEGLGSESGSQEDIADVSAVTRLLQQHVPDARLVENFGQELTYVLP
YHGAKDGAFALLFKELDEKLAELGVSSYGVSDTTLEEIFLKVAEETGVDTEIIEPLVVPP
PKEVSRSPEDSNWERRSLRRKSSGRAERALKKTPEGEKKPAFRTRVKPTGDAVDNGRGSC
QVTGQAFLRQQFRALFIKRFHFARRSRKGFVAQIVLPAAFVCLALIFSSVVPPFAEYPSL
ELHQWLYGAQFTFVSNDAPGESHVNALARSLTESPGFGTRCMNTNPIPSYPCPGGGSPDW
TQPAMSAEASSVLQSGNWSMGNPSPACQCSTQKHRVMFPECPEGAGGAPPMQRLQNNTDT
LQNLTAVNITDHILKTLPKYYKTRHGGISVGDKNSVVRMTAADQSLLLARFGKMFNLSVP
TMGSSGVTIEDFIGTRNNLKVWFNSKAFHAPGAFTSVASNAVLRAGLPAGADPSDYGITA
FNHPLNLTKEQLTDVIARSSGIDVVVAICVIFAMSFVPASFVLFLIQERVSKAKHLQFVS
GVNPAVYWICNFVWDMCNYAVPTVIVIVIFLCFQKQAYVSTANLPVLILLLFLYGWSITP
LMYPASFIFSVPSTAYVVLTCINLFIGINGSVATFVLELIKDQPDLQKANDILRVVLLIF
PHFCLGRGLMDLAKNQQLADIGARFGQNSFKNPFDWDVVGKNLFAMAVEGVVFFTLTLLI
QYRFFVKPRPVKMELPATKDEDEDVARERQRIASGGGLTDSLRIVELVKIYRGKKKAAVD
RVSVGIPPGECFGLLGVNGAGKTTMFKMLTGDTDVTSGEAFLTEYSILTNMREVHQNMGY
CPQFDAINDLITGREHLEFYARLRGVPEKEVATVAEWGIRKLGLIRYADRSAGSYSGGNK
RKLSTAMALIGCPPVVFLDEPTTGMDPKARRFLWDCILSVIKEGRCVLLTSHSMEECEAL
CTRMSIMVNGRFQCLGSVQHLKNKFGDGYTVTLRVAGSPPVLPPVEEFIDSAFPGSLLKE
RHHNMLQYQLPSAESSLAKIFNLLALHKEELNVEDYSVSQTTLDEVFVSFAKHQHDGEEW
ESLMNQATMQQQQKDTEL
NT seq
6717 nt
NT seq
+upstream
nt +downstream
nt
atgggaggccgcacgcagctctatctgctgctgtggaagaatttcgcccttcgcaaacgc
cagaaggtgcgggtcttcgtggagttgctgtggcccctgttcctcttcctcatcctcgtg
tgggtccggacaacgacgcctccaagcgccaacggggaatgtcactaccgcgtgcgggcg
ctgccatcagcggggctgttgccgtggctacaggggacaatgtgcgagctgggcaccacg
tgcgtgaccagccacacgcatgccgaggcccccggggaggtcaacaactacagagactcg
ctgctgtcccgggtgctggtggacacgcagggcttgctgatgaacgactcattctggcgc
agccttgagaccgtgtgggtgagcagaacatcagccatggggctcgccaacgtcatcctg
accgacccaagggcttggaccggtaacatcgtgctacagaatgtgctggtggacagctcc
ccgctacaagcctacatgaagcgaaacctgtcctttccggactgggccgtgtcggacctg
atggccgtgcagatccgaccccaaccgttcctggctctgtcgctggcgcaacggctgagt
ccgcgcgcgctcgcgtgcaacacctccctgcagagcctggtgctggtcatcggctcgagc
aaccggagctcgctcgtcaatctcacatgctcgctttccgatgagcagctccagggattc
gcggccgccgcggccttaagcgtcaacgcgagtcgcctctccacgcaggtgatgatgtcg
ctgaacaggacggtgagtgggcagctcctgggcctcgtgggtaccctgggcccgagtctc
ggcattcttcagcagcaggtgatgggtcttgacagtttgaagactgtcatgggcggactg
ggcggctctactggcttctcgctgtcacagctgatgtgcggcagcagtggggggctcagc
ttcctggacaacttggggtcctcaaacacctccagctcgggaacatccggaggaacaacc
accacaaccaccaagagccagaactcgagctccacagccagcgccggcaactcgttgtgc
gccaacctcatcagcatggccgagtcgtcggcggccaccaagatattgtggaagatgttc
aagcccttcctgcttggcaagatcccctacacgccagacacccctgccgtgcgtgccatc
ctccagcaggcgaatacgacattcgaggctctcgccatgctggggagactgggcgtcgcc
tgggacacggtgtcgcctgccctctacaacttcttcagcaacagctccgagctgcaactg
cttcggggtgccctggcctcgccgatggtggccagcatgctggaccccgcactgagcggc
tccggcttcacggccgccggcctctccactttcttatcgggcggcaacgggacaacgtgg
aggagcatcatgggcagcatgggcagcgtcctgcacacggtgtccagctacgtgcagtgc
ctggagctgaacaagtttgagggccaagcgaacgagggcagcctcgtgaaccgctcgctg
gagctgctgggcagcagccagctgtgggccgctctcgtctttcccgagctgggccccgcc
gaccccgtgccacgccacctcaagtacaagatccgcatggacatcgactcggtggaggtc
accaacagggtcaaagacagggtgtacagcccgggaccacgcaacgagtcgcgctacctc
aagttcggcttcgcgttcgtgcaggacatggtggagcgggcagcggcgcgcctcttcgcc
ggcgggcagcctgccaccggcatcttcctgcagcagatgccctacccctgctacgtgcag
gactcgttcctgcagatgatgacgagctcgctgccgctcttcatgacgctggcgtggatc
tactcggtggccatgatcctcaagggcgtggtgcacgagaaggaggcgcggctcaaggag
acgatgcgcatgatgggcctcaccaacgggctgcactggctcggctggttcatctcctgc
ttcattccgttcatcgtcagcgccatctgcctcatactcatcctcaagtttgggaacgtg
ttccccaacagcagcttcctcatcctgctgctctacttcctggcgttcaccgtggcgacc
atcatgcagtgcttcctggtcagcacgttcttcgcgcgagcgaacctggcggcggcctgc
gggggcatcctctacttcctgctctacctcccctacgtgctgtgcaacgtctggcaagac
cgactcaccttccccatgaagatactcgccagcctcttgtccacagtgtcgttcggcttc
ggctccgagtacatctcccagtacgagcagctcggcgtgggctcgcagcccagcaacctg
cgcgtcagcaccgtggacggagaccgctactcgctcgtcacctccatcatcatgatgttc
ttggacgcgctcctctacggcgtgctcacgtggtacatcgagaacgtcttcccaggccag
tacggtgtgccacggcgctggtacttccccttcaccaggtcctactggtgtggggcttca
tcgcacgacggtcagacgctgcctcactcctacaagcccccgagctccggcgacaagcag
atcctggaggaggagccgggcaagttgcccgtgggcgtctccatccagggcctggtgaag
gtttacgacgagggcaagaagctcgccgtcgacggcctcaccctcaacttctaccagggc
cagatcacctccttcctgggacacaacggggccggcaagaccaccaccatgtccatcctg
acggggctgttccctcccacgtccggcacggcgtacatgtgcggaaaggacatccgcacc
gacatggactcgatccgcaagagcctggggatgtgtccgcagcacaacgttctgtttgag
aacctcacggtggaggagcacatctggttctacgcgcgcatgaagggctgctcggaggaa
caggtgaagcaggagatgccgcagatgatcctggacgtggggcttccgcacaagaaggac
gagctctccaagaacctctccggcggcatgcagaggaagctctccgtcgccatcgcgttc
gtgggcggctcgcagatcgtcatcctggacgagcccacggccggcgtcgacccctacgcc
cgccgcggcatctggaacctcttgctcaagtaccggcacggccgcaccatcatcctgtcc
acgcaccacatggacgaggcggacctcctgggcgaccgcgtcgccatcatctcccacggc
cgcctgcgctgctgcggctcgtcgctcttcctgaagaacgccttcggcgccggctactac
ctcaccatggtgaagagcgagccgggctcacgacgaccctccgcgggggctgcccatctc
tacaaaaacctcgagcagacggacggtcagtcgcagagctcggacgaaggactgggcagc
gagtcgggaagccaggaggacattgccgacgtgagcgcggtgacgcggctgctgcagcag
cacgtgccggacgcccggctcgtggagaactttgggcaggagctgacctacgtgctgccc
taccacggcgccaaggacggcgccttcgcgctgctcttcaaggaactcgacgagaagctg
gcggagctcggcgtctcgagctacggcgtctcggacaccacgctcgaggagatcttcctg
aaagttgctgaagagactggagtggacacagaaattatcgaaccgttggtggtgccgccg
ccgaaggaggtgtcgcggtcgcccgaggattccaactgggaacgtcgctccctgcgccgg
aagtccagcggccgggcggaacgagctctgaagaagactccggaaggagagaagaaaccg
gcgtttcgtacaagagtgaaacccaccggtgacgccgtggacaacgggcgaggatcctgc
caggtgacgggacaggcgttcctgcggcagcagttccgagcgctcttcatcaaacgcttc
cacttcgccaggcgcagccgcaagggcttcgtggctcagatcgttttgccggcggccttc
gtgtgcctcgcgctcatcttcagcagcgtcgtgcctccgtttgcggagtaccccagcctg
gagctgcaccagtggctctacggcgcacagttcaccttcgtcagcaacgatgcccccggc
gagagccacgtgaacgccctggcacgctccctgacggagtctcccgggttcggcacccgc
tgcatgaacaccaaccccatcccctcgtacccatgcccagggggcgggagcccggactgg
actcagccggccatgagcgccgaggcctccagcgtcctgcagagcggcaactggagcatg
ggcaacccgtcgcccgcgtgccagtgcagcacccagaagcaccgcgtcatgttccccgag
tgccccgagggggcgggtggcgccccccccatgcagagactgcaaaacaacacggacacc
ctgcagaacctgacggcagtcaacatcactgaccacatcctgaaaacgctgccgaaatac
tacaaaaccagacacggcgggatttccgtcggagacaagaacagcgtcgttcggatgacg
gccgccgaccagtcgctcctcctcgcacgcttcggcaagatgttcaacttgagcgtgccg
accatgggctcgtcaggagtgacaatcgaagacttcattgggacacgaaacaacctgaag
gtctggttcaacagcaaggccttccacgcccctggagccttcacgagcgtcgcgagcaac
gccgtgctgcgcgcgggccttcccgcgggggccgacccctcggactacggcatcacggcc
ttcaaccacccgctgaacctcaccaaggagcagctcacggacgtcatcgcgaggtcgtcg
gggatcgacgtggtggtggccatctgcgtgatcttcgccatgtccttcgtgccggcgagc
ttcgtgctcttcctcatccaggagcgcgtgagcaaggccaagcacctgcagttcgtgagc
ggagtcaacccggccgtctactggatctgcaacttcgtctgggatatgtgcaactacgcg
gtccccaccgtcatcgtcatcgtcatattcctctgcttccaaaagcaagcgtacgtgtcc
acggcgaaccttcccgtgctcatcctgctgctgttcctctacgggtggtcgatcaccccg
ctgatgtacccggcgtcgttcatcttctcggtgcccagcacggcgtacgtggtgctcacc
tgcatcaacctcttcatcggcatcaacggcagcgtcgccaccttcgtcctggagctcatc
aaagaccagccggacctgcagaaggcgaacgacatcctccgcgtggtgctgctcatcttc
ccgcacttctgcctcggccgtggcctcatggacctcgccaagaaccagcagctggctgac
atcggcgcgcgcttcggccagaactcgttcaagaacccctttgattgggacgtggtcggg
aagaacctcttcgccatggccgtggagggagtcgtcttcttcacgctcacactgctcatc
caataccgcttcttcgtcaagcccaggccggtgaagatggagctacctgccacgaaggac
gaggacgaggacgtggctcgcgagcggcagcgcatcgcgtccggcggcggcctcaccgac
tcgctccgcatcgttgagctcgtcaagatctaccgcgggaagaagaaggctgcggtggac
cgcgtctccgtgggcatcccgccgggagagtgcttcggcctgctgggcgtgaacggcgcg
ggaaagacgacgatgttcaagatgctgacgggcgacacggacgtcacgagcggcgaggcc
ttcctcacggaatacagcatcctgaccaacatgcgggaggtgcaccagaacatgggctac
tgcccgcagttcgacgccatcaacgacctcatcacggggcgggagcacctggagttctac
gctcgcctgcgcggggtccccgagaaggaggtggccacggtggccgagtgggggatccgc
aagctgggcctgatccgctacgcggaccgctcggccggcagctacagcggtggcaacaag
cgcaagctctccacggccatggcgctcatcggctgccctcccgtcgtcttcctggacgag
ccgaccactgggatggacccgaaggcgcggcgcttcctgtgggactgcatcctcagcgtc
atcaaggaggggcggtgcgtgctgctcacctcgcacagcatggaggagtgtgaggcgttg
tgtactcgcatgtccatcatggtgaacggcagattccagtgcctgggcagcgtgcagcat
ctcaagaacaagtttggcgacggctacacggtgacgctgcgcgtggccggctccccgccg
gtgctgccgcccgtcgaggagttcatcgactcggcgttccccggcagcctcctcaaggag
cgccaccacaacatgctgcagtaccagctgccctccgccgagtcctcactcgccaagatc
ttcaacctgctggcgctgcacaaggaggagctcaacgtggaggactactccgtctcacag
accacgctcgacgaggtgttcgtgagcttcgccaagcaccagcacgacggggaggagtgg
gagtccctgatgaaccaagcgacgatgcagcagcagcagaaggacacggagctgtga
DBGET
integrated database retrieval system
