Lethenteron reissneri (Far Eastern brook lamprey): 133349442
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Entry
133349442 CDS
T09663
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-2-like
KO
K06243
laminin, beta 2
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04510
Focal adhesion
lrj04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133349442
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133349442
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
133349442
NCBI-ProteinID:
XP_061418868
LinkDB
All DBs
Position
30:complement(5324224..5398710)
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AA seq
1789 aa
AA seq
DB search
MNEDEAMLYRAVLLCVALGASVASQETWGAAHGCAQGSCYPVTGDLLVGRADKISASSTC
GLVSRQRYCIVSHLQEQEKCFHCDSRRPYQPGRNPNSHRIENVVTSFAPSRRMTWWQAEN
GVEKVTIQLDLEAEFHFTHLIMTFKTFRPAAMLVERSSNFGRSWKPYRYFAYDCDAAFPG
IATRTLQRVDDVVCESRYSDIEPSTEGEVIFKVLDPAIKITDPYSHTIQDLLKITNLRIN
LTRLHTLGDNLLDPRSEIKQKYYYSLYELVVRGSCFCYGHASECAPIAPSQRSHDGMVHG
RCVCKHRTRGLNCEQCEDFYADSPWRPAEGRQSHECKKCNCNSHSDKCHFDVAVYKASGN
VSGGVCEDCRHNTMGRNCELCNTFFYRDPRRDAGDADACLPCDCEPDGTLNGGLCDGHTD
AALGLRAGHCRCKPNAEGPRCDRCKAGFFGLNGDDPLGCRPCQCNPLGTLPGRAACDATT
GDCFCKRLVTGRRCDQCLPGHWGLGHNLSGCRVCECDDGGAIDNKCSMSTGQCRCRSHMT
GRTCGQVEPGYFVAALDYHTYEAEEATRSPGVTAVVREPPRERAAASWTGRGMCRVPEGG
RLDFSVSVPFSMEYDLVLRYEPQLPEEWEEVVVTVERPGAIAASSTCGNTIPSDDLVSVT
LPPGSRYVVVPQPVCLEKGLRYGVRVDFKSYRSGGSVANAHVLVDSLVLLPRHSSLEMFI
AGDPASTARRTSFERYRCGDAGRAVSKAPVTDVCAGLLRSVSALVHNGSLPCQCNTQGSS
STECNPVGGQCRCKPNVAGRRCDQCVPGTFGFGPSGCRECHCDQRGSTSAICDAVSGQCA
CRPGAFGRQCDRCEAGHWGFPECRACRCHGHSDECNPRTGACLSCRGHTAGDSCDRCASG
YYGSPGSGEQCRPCQCPEGPGTGRHFASGCSHDPRSRAVACACLPGFTGARCDQCAPGHY
GDLRVAGGRCQPCQCNGNIDPTDAASCDGRTGRCLRCLRDTEGSSCQNCRTGYYGNATSQ
RRCQKCTCVTAGTERSSCGLTDGACACDARSGQCRCLPNVQGLACDRCAPNHWGLSQGAG
CRPCGCDPAHSAGPSCSEFNGQCHCLAGFGGLTCNECQENHWGEPRVKCSACDCEASGVL
TRQCERATGQCACRPGVAGRRCDRCARGFSGAFPACEPCHQPCFPDWEAAISELGRRAGS
LSERATRLLTGGADAGPYARRMAEVEETLAGVRELLAARNASAAAVERLSGLIDDVGRQV
EAMTGRLAQLEAAIGGAAKQNGDANVLLSELEGDAREASTRAGELGHQIDTIKHSNFRGA
YGSVKDSYQQSREAERKASAAATSPAGPVARSEATRQRAEKFMAAKRAELEQRLEANADA
LQELGWEARQLELNELNEKVCGVTRDVPCAESACGGVGCRDEDGRPHCGGMNCGGVATVA
SNALERSTIADREMQKALGDLDKLHQQVMDVKSKAGKAKEEAQGTLQRANGTRAQVEGAV
QGLRELIKQIKEFLTEEGASPDSIELVAERVLRLGVPASPQQIGRLADEIKERVSSLANV
DAILARTAGSINEAERLLQDAKRAKARAENAKSAAETVRKALAGAREAQAGAEVAIQQAR
ADLHDTQDTLASTESETAAAGQRLQDATARLLGLERDVDALKMKTAANSLAAGKADKAAG
MAKQRADEAKQMHDGELRDRFRALQDLFGKKGRGAEEARRRVEQLREQARAVLAGAQARL
ARLAELEVAYDGNAVELERKAHRLRGLEDKLRGIVYAINKQINVYNTCQ
NT seq
5370 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaagacgaggcaatgctctacagagccgtgctgctgtgtgtggcgctgggcgcc
tccgtggcctcgcaggagacgtggggtgcggcgcacggatgcgcgcagggcagctgctac
cccgtgacgggggacctcctcgtcggcagggcggacaagatctccgcatcgtccacgtgc
ggcctcgtctcgcgccagcgatactgcatcgtgagccacctgcaggagcaggagaagtgc
ttccactgcgactcgcggcggccgtaccaaccggggcgcaaccccaacagccaccgcatc
gaaaacgtcgtgacgtccttcgcgcccagccgacgcatgacctggtggcaggcggaaaac
ggcgtcgagaaggtcaccatacagctggacctggaggcagagtttcacttcactcatctc
atcatgaccttcaagacgttcaggccggccgccatgctggtggagcgttcgtcgaacttt
ggccgttcgtggaagccgtaccgctactttgcgtacgactgcgacgcggcgttcccggga
atcgcgacgcgaacgctgcagcgcgtggacgacgtggtgtgcgagtcgcgctactccgac
atcgagccgtccaccgagggcgaggtcatctttaaagtcctggaccctgccataaagatc
accgatccctacagccacacgatacaagacctgctgaagatcacgaacctgcgcatcaac
ctgacgcggctgcacacgctgggcgacaacctcctggacccgcgctccgagatcaagcag
aagtactactactcgctctacgagctggtggtgcgcggctcctgcttctgctacggccac
gccagcgagtgcgcgcccatcgcgccctcgcagcgctcccacgacggcatggttcacggg
cggtgcgtgtgcaagcatcgcacgcgggggctcaactgcgagcagtgcgaggatttctac
gccgactcaccctggaggccggccgagggacggcagtcgcacgagtgcaaaaagtgcaac
tgcaacagccactcggacaagtgccacttcgatgtggccgtgtacaaggcgtcgggcaac
gtgagcggcggggtgtgcgaggactgccgccacaacaccatggggcgcaactgcgagctc
tgcaacaccttcttctaccgcgacccgcgccgagacgccggcgacgccgacgcctgcttg
ccgtgcgactgcgagcccgacgggacgctgaacggggggctctgcgacggccacacggac
gcggcgctgggcctgcgcgccggccactgccgctgcaagcccaacgcggagggcccgcgc
tgcgaccgctgcaaggcgggattcttcggcctcaacggcgacgacccgctcggctgccgc
ccctgccagtgcaaccccctggggacgctgccgggccgcgcagcgtgcgacgccaccacg
ggggactgcttctgcaagcgcctggtgaccgggcggcgctgcgaccagtgtctgccggga
cactggggcctgggccacaacctgagtgggtgcagggtgtgcgagtgcgatgacggagga
gccatcgacaacaagtgttcgatgagcaccgggcagtgccgctgccgaagtcacatgact
ggacgcacgtgcgggcaggtggagcccgggtattttgtggcggcgctcgattaccacacg
tacgaggcagaggaggccacgcgctcgcccggcgtgacggcggtggtgcgggagcctccg
cgcgagcgcgccgcggcgagctggaccggacgggggatgtgccgtgtgcccgagggcggc
cgcctcgacttcagcgtctccgtgcccttctccatggagtacgacctggtgctgcgctac
gagccgcagctgcccgaggagtgggaggaggtggtggtcactgtggagcgaccgggtgcc
attgcggcgagcagcacctgcggcaacaccatcccgtccgacgacctcgtgtccgtcacg
ctgccgcccggctccaggtacgtggtggtgccgcagcccgtgtgcctggagaagggcctc
cgctacggcgtccgcgtcgacttcaagagctaccgctccgggggcagcgtggccaatgcg
cacgtcctggtcgactcgttggtgctgctgccgcgccactcttcgctggagatgttcatc
gcgggcgacccggcgtcgacggcgcgccgcaccagcttcgagcgctaccgctgcggcgac
gcgggcagggccgtgagcaaggcgcccgtgacagacgtgtgcgcgggtctgctgcgcagc
gtgtcggcgctcgtccacaacggctcgctgccgtgccagtgcaacacgcagggctccagt
agcaccgagtgcaaccccgtgggcgggcagtgccgctgcaaacccaacgtcgccggacgt
cggtgcgaccagtgcgtcccggggaccttcggcttcggaccgtcagggtgccgggagtgc
cactgcgaccagcgcggctccaccagcgcgatctgcgacgccgtctcggggcagtgcgcc
tgccggcccggggccttcggccgccagtgcgaccgctgcgaggcgggacactggggcttc
ccagagtgccgcgcgtgccgctgccacggacactcggacgagtgcaacccccgcacgggc
gcgtgcctctcgtgccgcggccacacggccggtgatagctgcgacagatgtgccagtggc
tactacgggagccccggctccggggagcagtgccgcccgtgccagtgccccgagggccca
ggcaccgggcgccactttgccagcggctgcagccacgacccgcgctccagagctgtggcg
tgcgcgtgtctccccggcttcaccggcgctcgctgcgaccaatgcgccccgggtcactac
ggggacctgcgcgtggcgggcggacgatgccagccgtgccagtgcaacggcaacatcgac
cccacggacgcggcgtcctgcgacggccgcacggggcgctgcctacgctgcctgcgcgac
acggaggggtcctcgtgccagaactgtcgcaccggatactacggcaacgccacctcgcag
cggcggtgccagaagtgcacgtgcgtcacggccggcacggagcgctccagctgtggcctg
acggacggggcctgcgcctgcgacgcccgcagcggccagtgccgctgcctgcccaacgtc
cagggcctggcgtgcgaccgctgcgcccccaaccactgggggctgagccaaggcgccggg
tgccgcccctgcggctgtgaccccgcgcactccgctgggccatcttgcagtgagttcaac
ggtcagtgccactgcctggctgggttcggcggcttgacctgcaacgaatgtcaggagaat
cattggggagagcctcgcgtaaaatgcagtgcatgcgactgcgaggcgagcggcgtgctc
acgcggcagtgcgagcgcgcgacggggcagtgcgcgtgccgccccggcgtggcggggcgc
cgctgcgaccgctgcgctcgcggtttctcgggcgccttcccggcgtgcgagccgtgccac
cagccctgcttccccgactgggaggcggccatctccgagctgggccggcgcgccggcagc
ctgagcgagcgggcgacgaggctgctgacgggcggcgccgacgctgggccgtacgcgcgc
aggatggccgaggtggaggagacgctggcgggggtgcgcgagctgctggccgctcgcaac
gcgtcggccgcggccgtcgagaggctctcggggctcatcgacgatgtcgggcggcaggtg
gaggccatgacgggccgcctggcgcagctcgaggccgccattggaggggcggcgaagcag
aacggcgacgccaacgtgctgctgtcggagctcgagggcgacgcgagggaggcgagcacg
cgcgccggcgagctcggacaccagatcgacaccatcaagcactccaacttccgaggcgcc
tacggcagcgtcaaggactcgtaccagcagtcccgcgaggcggagcggaaggcgagcgcc
gcggccaccagcccagcggggcccgtggctcgctccgaggccacgcgccaacgcgccgag
aagttcatggccgccaagcgcgccgagctagagcagcggctggaagccaacgccgacgcg
ctgcaggagctgggctgggaggcgcgccagctggagctcaacgagctcaacgagaaggtg
tgcggagtgacgagggacgtgccgtgcgcggagagcgcgtgcggcggcgtcggctgcagg
gacgaggacggccgcccgcactgcgggggcatgaactgcggcggcgtcgccaccgtggcc
tccaacgccctcgagcgctccaccatcgccgaccgcgagatgcagaaggccctgggggac
ctggacaagctgcaccagcaggtcatggacgtgaagagcaaggcaggaaaggccaaggag
gaggctcagggcaccctgcagagagccaacggcacccgcgcgcaggtggagggcgcggtg
cagggcctgcgggagctcatcaagcagatcaaggagttcctcacggaggagggcgcgagc
cccgacagcattgagctggtggcggagcgggtgctgcgtctcggcgtgccggcttcgccg
cagcaaatcggccgcctcgccgacgagatcaaggagcgcgtgagcagcctggccaacgtc
gacgccatcctggcccgcacggcgggcagcatcaacgaggccgagcgcctcctgcaggac
gccaagagggccaaggcacgcgccgaaaacgccaagagcgccgcagagacggtgcgcaag
gcgctggcgggggccagggaggcgcaggccggggcggaggtcgccatccagcaggcccga
gccgacctgcacgacacgcaggacacgctggcctcgaccgagtcggagacggcggccgcc
gggcagcgtctgcaggacgcgacggctcgcctgctgggcctcgagcgcgacgtggacgcc
ctcaagatgaagacggcggccaacagcctcgcggccggcaaggccgacaaggcggccggc
atggctaagcagcgcgccgacgaggccaagcagatgcacgacggggagctgcgggaccgc
ttccgggcgctgcaggatcttttcgggaagaagggccgcggggcggaggaggcgcggcgt
cgcgtcgagcagctccgggagcaggcgcgggccgtgctggccggagcgcaggcccgcttg
gcgcgcctcgccgagctggaagtggcctacgatgggaacgcggtggagctggagcgcaag
gcacacaggctgcgcggtctcgaggacaagctgcgcgggatcgtctatgccatcaacaag
caaatcaacgtgtacaacacctgccagtag
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