Lethenteron reissneri (Far Eastern brook lamprey): 133349689
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Entry
133349689 CDS
T09663
Name
(RefSeq) integrin beta-1-like isoform X1
KO
K05719
integrin beta 1
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04145
Phagosome
lrj04510
Focal adhesion
lrj04512
ECM-receptor interaction
lrj04514
Cell adhesion molecules
lrj04530
Tight junction
lrj04810
Regulation of actin cytoskeleton
lrj04820
Cytoskeleton in muscle cells
lrj05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
133349689
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133349689
04514 Cell adhesion molecules
133349689
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133349689
09144 Cellular community - eukaryotes
04510 Focal adhesion
133349689
04530 Tight junction
133349689
09142 Cell motility
04820 Cytoskeleton in muscle cells
133349689
04810 Regulation of actin cytoskeleton
133349689
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
133349689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrj04131
]
133349689
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lrj04147
]
133349689
04515 Cell adhesion molecules [BR:
lrj04515
]
133349689
04090 CD molecules [BR:
lrj04090
]
133349689
Membrane trafficking [BR:
lrj04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
133349689
Exosome [BR:
lrj04147
]
Exosomal proteins
Proteins found in most exosomes
133349689
Cell adhesion molecules [BR:
lrj04515
]
Integrins
Integrin beta subunits
133349689
CD molecules [BR:
lrj04090
]
Proteins
133349689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
B2-adapt-app_C
Motif
Other DBs
NCBI-GeneID:
133349689
NCBI-ProteinID:
XP_061419327
LinkDB
All DBs
Position
31:4240727..4300556
Genome browser
AA seq
871 aa
AA seq
DB search
MLFDEISVVFAGSFVASALCVTSAPLQCGSTCTHTYNASARVDAGPALSVAARRASLQPT
SPSKSRRLFAMGAKRDVVAVLCCMLMINSACFAQQETTNECLSANAKSCGECIQVGGKCA
WCTKPDFTGPGESNSARCDYADNLERRKCPPTSIESPTGKVKILKDKKLTDRSSKLPAKD
ITQIAPQLIELTLRSGQPQNIDLRFRRAADYPIDLYYLMDLSYSMKDDLENVKKLGTELQ
QRMKDITSDFFIGFGSFVDKTVMPYISTTPKKLQNPCGNNDEKQVCTSPFSYKNVLSLTS
EGNKFNSLVSRQKISGNLDSPEGGFDAMMQAAVCGNKIGWRNNTRLLVFSTDAGFHFAGD
GKLGGIVLPNDGRCHLDGKGMYTQSDFYDYPSVAQLVQKLGENSIQPIFAVTEEFYNVYK
ELSNLIPKSAVGVLSSNSSNVIQLIIDAYDALSSEIILENSKVPEGLQFRYTAVCKDNKV
FRGEQGRKCSDIQIGDEVQFTIEVVATKCPNNGKAHEVEIRPLGFQEKVTVRLRFECECQ
CHTSGVSNSMECHFGNGTMECGACRCNEGRVGRLCECGTDEVNSEDIEASCKRDNSSSVV
CSGRGDCVCGECICYKRESPELVSGKHCECDNFSCDRHNGLICGGNGRCECGKCECFSNF
TGSSCDCSLDARSCIGRNGEMCSGRGNCTCGTCTCTDPKYQGPKCEHCPSCPDACELHKD
CAECKAFQTGPKKETCDKCEFEVKKVEEMEKRESTEHTAFCKVKNEEDCWFYFNFTYAKS
DAEVYVQTKVECPEEPNIIAIIAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKDRM
NAKWDTQENPIYRSPINNFKNPNFGRKGVPP
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgctctttgacgagatcagcgtggtgtttgctggttcatttgtggcgagcgctttgtgt
gtaacgagtgcgcccctacaatgtggctcaacatgcacgcatacgtacaatgcttcggct
cgcgttgatgctggcccggcattgtcggtggccgcacgccgtgcctccctgcagccaaca
tcgccgagcaaaagccgtcgtctgtttgcgatgggagccaagagagatgttgtggccgta
ctttgctgcatgttaatgatcaactcggcgtgctttgcccaacaagagacgaccaacgag
tgtttgtctgctaatgccaagtcatgtggagagtgcattcaggttggcggcaagtgtgcc
tggtgtacaaagcctgacttcaccgggccgggggagtcgaactcggcacgctgcgactac
gcggacaacctggagcgccgcaagtgcccgcccacgtccatagagagccccacgggcaag
gtgaagatcctcaaggacaagaaactcaccgaccgcagcagcaagctgccggccaaggac
atcacgcagattgctccgcagctgatcgaactcacgctccgctcaggtcaaccgcagaac
atcgacctgcgtttccgccgcgcggccgactaccccatcgacctgtactacctgatggac
ctctcctactccatgaaagacgacctggagaacgtcaagaagctcggcacggagctgcag
cagcgcatgaaggacatcaccagcgacttctttatcggctttggatcgtttgtggataag
acggtgatgccctacatcagcaccactcccaagaaactgcagaacccgtgcggtaacaat
gacgaaaagcaggtgtgcaccagcccgttcagctacaagaacgtgctgtctctcacctcg
gaaggaaataaattcaactcgctcgtgagtcgccagaagatctccgggaacttggactct
cccgaaggtggcttcgacgcaatgatgcaggcagccgtgtgcgggaacaagatcggctgg
cgcaacaacacgcgtctgctcgtgttctccacggacgccggcttccactttgcgggcgac
gggaagctgggcggcatcgtgctgcccaacgacgggcgctgccacctggacgggaagggg
atgtacacgcagagcgacttctacgactacccgtcagtcgcgcaactggtgcagaaactc
ggggagaacagcatccagcccatcttcgccgtcacggaagagttctataacgtctacaag
gaactcagcaacttgatcccaaaatcggccgtcggagttctctcttcgaattccagcaac
gtcatccagctcatcatcgacgcctacgatgcactgtcgtcggagattattctggagaac
agcaaggtgcccgagggcctgcagttccgctacaccgccgtctgcaaggacaacaaggtg
ttccgcggggagcagggccgcaagtgctccgacatccagatcggcgacgaggtccagttc
acgatcgaggtggtcgccacaaagtgccccaacaacggcaaggcgcacgaggtggagatc
cggccgctgggcttccaggagaaggtgacggtgcggctgcgcttcgagtgcgagtgccag
tgccacacctccggcgtcagcaactccatggagtgccacttcggcaacggcacgatggag
tgcggcgcgtgcaggtgcaacgagggtcgggtggggcgcctgtgcgagtgcggcaccgac
gaggtgaactcggaggacatcgaagcgtcgtgcaagcgcgacaactcgtcgagcgtcgtg
tgcagcgggcgaggcgactgcgtgtgcggcgagtgcatctgctacaagcgcgagagcccc
gagctcgtgtccggcaagcactgcgagtgcgacaacttctcctgcgaccgacacaacgga
ctcatctgtggaggtaacggacgctgcgagtgcggcaagtgcgagtgcttcagcaacttc
acgggcagcagctgcgactgctcgttggacgcgcgctcctgcatcggccgcaacggcgag
atgtgctcgggccgcggcaactgcacctgcggcacgtgcacctgcaccgaccccaagtac
caggggcccaagtgcgagcactgtccctcgtgcccggacgcgtgcgagctgcacaaggac
tgcgcggagtgcaaggccttccaaacggggcccaaaaaggagacatgcgacaagtgcgag
ttcgaggtgaagaaggtggaggagatggagaagcgggagagcacggagcacacggccttc
tgcaaggtgaagaacgaggaggactgctggttctacttcaacttcacgtacgccaagagc
gacgccgaggtctacgtgcagaccaaagtcgagtgccccgaggagcccaacatcatcgcc
atcatcgcgggcgtggtggcgggcatcgtgctcatcggccttgcgctgctgctcatctgg
aagctgctcatgatcatccacgaccggcgcgagttcgccaagttcgagaaggaccgcatg
aacgccaagtgggacacgcaagaaaacccaatctaccgcagccccataaataatttcaag
aaccccaactttggacgcaaaggcgtccctccctga
DBGET
integrated database retrieval system
