Lethenteron reissneri (Far Eastern brook lamprey): 133349879
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Entry
133349879 CDS
T09663
Name
(RefSeq) gamma-aminobutyric acid receptor subunit gamma-2-like isoform X1
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04080
Neuroactive ligand-receptor interaction
lrj04082
Neuroactive ligand signaling
lrj04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
133349879
04082 Neuroactive ligand signaling
133349879
04519 Cadherin signaling
133349879
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lrj04040
]
133349879
Ion channels [BR:
lrj04040
]
Ligand-gated channels
GABA-A
133349879
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
GlpR
Motif
Other DBs
NCBI-GeneID:
133349879
NCBI-ProteinID:
XP_061419685
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Position
32:2096309..2258638
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AA seq
644 aa
AA seq
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MTVMMALRLVSGWRPGSVGMREPPGWTKIQRRRRHNQQQQQHQQQLHDHHGHHHHNHDHH
HHHQYHHHEKYHQYNRQDLQQIWKQDRRRPVREEQQNHHHHQQQQLLQQHHHPPQQQQCP
AFIFWGRTDYTEWQPILPAPPARQDKEEGKRIIKEREKTTTMLQEEEKREEVVDVAGVSP
TVASRMAAVPPRLSRRVLLLALMLLSLHACAGKIEEDDFQDMNANKTWVLAPKVYESDVT
QILNTLLEGYDNNLRPDIGIQPITVETDIYVNSIGPVSAINMEYTIDIFFAQTWFDSRLR
FNSSMKVLRLNSNMVGKIWIPDTFFRNSKQADAHWITTPNQLLRISNNGKVLYTLRLTIN
AECQLQLHNFPMDEHSCPLEFSSYGYPKDEILYKWSKSSVEVANQRSWKLYQFSFLGLRN
TTNILSTDSGDYIVMTVYFDLVRRMGYFTIQTYIPCILIVVLSWVSFWINKDATPARTSL
GITTVLTMTTLSTISRKSLPKVSYATAMDLFVTVCFFFVFAAMIEFAMLTFFVSKKKLSG
GKKKKKRHAPNPVVLDVRPGSATVPMNNAMQHLSAEAEEEGGYECLDGKDCSSFFCCFED
CERRSWKEGRIHIQVLKLDSYSRVFFPISFTLFNLVYWIAYLYL
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgacagtgatgatggcgcttcggctggtgtcggggtggcggcccgggtctgtcggcatg
cgggagcctccgggatggaccaagatccagcgccgccgtcgtcacaatcagcaacagcag
cagcaccagcagcagcttcacgaccatcacggccaccaccaccacaatcacgaccaccac
catcaccaccaatatcaccatcatgaaaaataccatcaatacaatcgccaagacttgcag
cagatttggaagcaggatcgacggagacctgttcgagaggagcagcagaatcatcatcat
catcagcagcagcagcttcttcaacaacatcatcatcctcctcaacagcagcagtgtcct
gcatttatattctggggccgcaccgactacacggagtggcagcccattctcccggccccg
ccagcccggcaggacaaagaggaggggaagagaataataaaggagagggagaagacgacg
acgatgctacaggaggaggagaagagggaggaggtggtggatgtcgccggggtttccccc
accgtggcgtcgcgaatggctgcggttcctccccggctgtcgaggcgcgttcttctcttg
gctctcatgctgctgtctctgcacgcctgcgctggcaagattgaagaggatgatttccag
gatatgaacgctaacaagacatgggtcctggcccccaaagtctacgaaagcgacgtcacc
caaattctcaacacgcttctggaaggctacgataacaatctgagaccggacatcggcatc
cagccgattaccgtggaaacggacatctacgtcaacagcatcggcccagtgtcagctatt
aacatggagtacaccatcgacatattcttcgcccagacgtggtttgacagcagacttcgg
ttcaacagctccatgaaagtgttgagattgaacagcaacatggtggggaagatctggatc
ccagataccttcttccggaactcaaagcaggctgacgcccattggattacgaccccaaac
caattgctgcgcatatcaaacaacggaaaggtgctctacacactgagattgactataaat
gcagaatgtcagcttcagctccataactttcctatggatgagcattcctgtcccctggaa
ttttccagttacggttatcccaaggatgagatcctttacaaatggagcaagagttctgtg
gaagttgccaaccaacgctcttggaagctctaccagttctccttcctgggcctcaggaac
accaccaatatcctgtcgactgattccggtgattacatcgtcatgacggtttattttgat
ttggtgagaagaatgggatatttcaccattcagacgtacatcccctgcatactgatcgtt
gtgctgtcatgggtgtccttttggatcaacaaagatgccactcccgccagaacatccctc
gggatcacgacggtgctgaccatgaccactctgagcaccatctcccgcaagtcgctgccc
aaggtttcctatgcaacagccatggacctcttcgtcaccgtctgcttcttcttcgtcttt
gccgccatgatcgagttcgccatgctcacgttcttcgtcagcaagaagaagctcagtggt
ggcaagaaaaagaagaaaaggcacgcgccgaaccccgttgtgctggacgtgagacccggt
tcggcgacggtgcccatgaataacgccatgcagcacctctcggccgaggcggaggaggag
ggcggctacgaatgtctggacggcaaagactgctccagcttcttctgctgcttcgaggac
tgcgagcggcggtcgtggaaagagggccggatccacattcaggtcctcaagctcgactcg
tactcgcgcgtcttctttcccatctccttcacgctcttcaatctcgtgtattggatcgcg
tacctttacctgtaa
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